Gene annotation
Transcriptome id Sobic.010G175400.1
Synonym
Functional annotation -
UniProt A0A194YKX1
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.010G175400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G138000 FAD binding domain of DNA photolyase domain containing protein, expressed K12119: cryptochrome 2
2 Sobic.007G103100 SWP, putative, expressed K15156: MED14, mediator of RNA polymerase II transcription subunit 14
3 Sobic.001G375100 AAA-type ATPase family protein, putative, expressed -
4 Sobic.001G373900 MYB family transcription factor, putative, expressed -
5 Sobic.003G186000 WD domain, G-beta repeat domain containing protein, expressed -
6 Sobic.003G247500 expressed protein -
7 Sobic.001G194200 diacylglycerol kinase, putative, expressed -
8 Sobic.006G055200 RNA-binding motif protein, putative, expressed K13192: RNA-binding protein 26
9 Sobic.006G087700 T-complex protein 11, putative, expressed -
10 Sobic.005G001000 RNA recognition motif containing protein, putative, expressed K10643: CNOT4, NOT4, CCR4-NOT transcription complex subunit 4
11 Sobic.002G275700 pantothenate kinase, putative, expressed K09680: type II pantothenate kinase
12 Sobic.010G139600 STE_PAK_Ste20_STLK.5 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08835: OXSR1, serine/threonine-protein kinase OSR1/STK39
13 Sobic.001G016700 ion channel DMI1-like, chloroplast precursor, putative, expressed -
14 Sobic.003G205200 expressed protein K19027: zinc finger FYVE domain-containing protein 26
15 Sobic.001G248300 OsPOP21 - Putative Prolyl Oligopeptidase homologue, expressed K01303: acylaminoacyl-peptidase
16 Sobic.004G136300 Sec1 family transport protein, putative, expressed K15292: STXBP1, syntaxin-binding protein 1
17 Sobic.010G169600 OsCML2 - Calmodulin-related calcium sensor protein, expressed -
18 Sobic.009G011600 expressed protein -
19 Sobic.002G146300 cig3, putative, expressed K14409: SMG7, protein SMG7
20 Sobic.010G010700 PHD-finger family protein, expressed -


Gene co-expression network
sample Sobic010G175400 Sobic010G175400 Sobic010G138000 Sobic010G138000 Sobic010G175400--Sobic010G138000 Sobic007G103100 Sobic007G103100 Sobic010G175400--Sobic007G103100 Sobic001G375100 Sobic001G375100 Sobic010G175400--Sobic001G375100 Sobic001G373900 Sobic001G373900 Sobic010G175400--Sobic001G373900 Sobic003G186000 Sobic003G186000 Sobic010G175400--Sobic003G186000 Sobic003G247500 Sobic003G247500 Sobic010G175400--Sobic003G247500 Sobic001G194200 Sobic001G194200 Sobic010G175400--Sobic001G194200 Sobic006G055200 Sobic006G055200 Sobic010G175400--Sobic006G055200 Sobic006G087700 Sobic006G087700 Sobic010G175400--Sobic006G087700 Sobic010G138000--Sobic010G175400 Sobic010G138000--Sobic001G194200 Sobic010G138000--Sobic007G103100 Sobic004G136300 Sobic004G136300 Sobic010G138000--Sobic004G136300 Sobic002G276100 Sobic002G276100 Sobic010G138000--Sobic002G276100 Sobic001G002000 Sobic001G002000 Sobic010G138000--Sobic001G002000 Sobic004G291900 Sobic004G291900 Sobic010G138000--Sobic004G291900 Sobic001G268200 Sobic001G268200 Sobic010G138000--Sobic001G268200 Sobic002G275700 Sobic002G275700 Sobic010G138000--Sobic002G275700 Sobic002G316600 Sobic002G316600 Sobic007G103100--Sobic002G316600 Sobic007G103100--Sobic003G186000 Sobic007G103100--Sobic001G194200 Sobic007G103100--Sobic004G291900 Sobic004G276400 Sobic004G276400 Sobic007G103100--Sobic004G276400 Sobic001G527800 Sobic001G527800 Sobic007G103100--Sobic001G527800 Sobic003G205200 Sobic003G205200 Sobic007G103100--Sobic003G205200 Sobic007G103100--Sobic002G275700 Sobic007G103100--Sobic006G055200 Sobic003G155100 Sobic003G155100 Sobic001G375100--Sobic003G155100 Sobic008G001200 Sobic008G001200 Sobic001G375100--Sobic008G001200 Sobic005G149200 Sobic005G149200 Sobic001G375100--Sobic005G149200 Sobic001G375100--Sobic003G247500 Sobic001G454500 Sobic001G454500 Sobic001G375100--Sobic001G454500 Sobic010G010700 Sobic010G010700 Sobic001G375100--Sobic010G010700 Sobic002G008900 Sobic002G008900 Sobic001G375100--Sobic002G008900 Sobic007G198300 Sobic007G198300 Sobic001G375100--Sobic007G198300 Sobic005G001000 Sobic005G001000 Sobic001G375100--Sobic005G001000 Sobic001G519900 Sobic001G519900 Sobic001G373900--Sobic001G519900 Sobic001G373900--Sobic001G375100 Sobic001G373900--Sobic001G194200 Sobic001G373900--Sobic007G103100 Sobic004G334300 Sobic004G334300 Sobic001G373900--Sobic004G334300 Sobic001G373900--Sobic003G186000 Sobic001G373900--Sobic008G001200 Sobic003G195000 Sobic003G195000 Sobic001G373900--Sobic003G195000 Sobic002G146300 Sobic002G146300 Sobic001G373900--Sobic002G146300 Sobic003G186000--Sobic004G276400 Sobic010G105200 Sobic010G105200 Sobic003G186000--Sobic010G105200 Sobic003G186000--Sobic010G010700 Sobic003G186000--Sobic005G001000 Sobic003G186000--Sobic003G205200 Sobic003G186000--Sobic001G194200 Sobic007G062800 Sobic007G062800 Sobic003G186000--Sobic007G062800 Sobic003G186000--Sobic008G001200 Sobic003G186000--Sobic007G103100 Sobic003G247500--Sobic001G194200 Sobic003G247500--Sobic008G001200 Sobic003G247500--Sobic001G375100 Sobic003G247500--Sobic010G010700 Sobic003G247500--Sobic006G055200 Sobic003G247500--Sobic001G454500 Sobic010G123600 Sobic010G123600 Sobic003G247500--Sobic010G123600 Sobic002G325300 Sobic002G325300 Sobic003G247500--Sobic002G325300 Sobic003G247500--Sobic005G001000 Sobic001G194200--Sobic004G291900 Sobic001G194200--Sobic006G055200 Sobic001G194200--Sobic005G001000 Sobic001G194200--Sobic010G010700 Sobic001G194200--Sobic004G276400 Sobic001G289800 Sobic001G289800 Sobic001G194200--Sobic001G289800 Sobic001G194200--Sobic008G001200 Sobic010G206900 Sobic010G206900 Sobic001G194200--Sobic010G206900 Sobic004G034900 Sobic004G034900 Sobic001G194200--Sobic004G034900 Sobic006G055200--Sobic001G194200 Sobic006G055200--Sobic010G010700 Sobic006G055200--Sobic005G001000 Sobic006G055200--Sobic004G276400 Sobic006G055200--Sobic004G291900 Sobic006G055200--Sobic003G186000 Sobic006G055200--Sobic001G289800 Sobic004G263600 Sobic004G263600 Sobic006G055200--Sobic004G263600 Sobic006G055200--Sobic001G002000 Sobic007G075400 Sobic007G075400 Sobic006G087700--Sobic007G075400 Sobic003G322700 Sobic003G322700 Sobic006G087700--Sobic003G322700 Sobic006G233500 Sobic006G233500 Sobic006G087700--Sobic006G233500 Sobic010G139600 Sobic010G139600 Sobic006G087700--Sobic010G139600 Sobic003G301900 Sobic003G301900 Sobic006G087700--Sobic003G301900 Sobic003G320700 Sobic003G320700 Sobic006G087700--Sobic003G320700 Sobic006G204900 Sobic006G204900 Sobic006G087700--Sobic006G204900 Sobic002G128200 Sobic002G128200 Sobic006G087700--Sobic002G128200 Sobic006G043600 Sobic006G043600 Sobic006G087700--Sobic006G043600
Octagon: transcription factors


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