Gene annotation
Transcriptome id Sobic.010G169600.1
Synonym emb1579
Functional annotation OsCML2 - Calmodulin-related calcium sensor protein, expressed
UniProt A0A194YKS8
Pfam PF14443
Panther DB PTHR14304 PTHR14304:SF11
NCBI CDD KOG4246; Predicted DNA-binding protein, contains SAP domain
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated


Orthologs (automatic annotation)
TAIR AT2G03150 : ATP/GTP-binding protein family
RAP-DB (Rice) -
MaizeGDB (Corn) Zm00025a051007 , Zm00025a042307
Brachypodium KQK22033 , KQK22034 , KQK22035 , KQK22036 , KQK22037 , KQK17960 , KQK17961
Barley -
Wheat TraesCS7B02G269000 , TraesCS7A02G358500 , TraesCS7A02G358500 , TraesCS7A02G358500 , TraesCS7A02G358500 , TraesCS7D02G364200 , TraesCS7D02G364200 , TraesCS7D02G364200 , TraesCS7D02G364200 , TraesCS7D02G364200 , TraesCS7D02G364200 , TraesCS7D02G364200 , TraesCS7D02G364200 , TraesCS7B02G269000 , TraesCS7B02G269000 , TraesCS7B02G269000 , TraesCS7B02G269000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G186000 WD domain, G-beta repeat domain containing protein, expressed -
2 Sobic.004G276400 expressed protein K11320: E1A-binding protein p400
3 Sobic.008G098900 ubiquitin carboxyl-terminal hydrolase, putative, expressed K11838: USP7, ubiquitin carboxyl-terminal hydrolase 7
4 Sobic.001G370900 expressed protein K11665: INO80, DNA helicase INO80
5 Sobic.002G308700 expressed protein K11643: CHD4, chromodomain-helicase-DNA-binding protein 4
6 Sobic.008G085300 hhH-GPD superfamily base excision DNA repair protein, expressed -
7 Sobic.006G184900 tetratricopeptide repeat domain containing protein, expressed K15176: RNA polymerase-associated protein CTR9
8 Sobic.004G223000 MIF4G domain containing protein, putative, expressed K14327: UPF2, regulator of nonsense transcripts 2
9 Sobic.005G162500 ubiquitin carboxyl-terminal hydrolase, putative, expressed K11838: USP7, ubiquitin carboxyl-terminal hydrolase 7
10 Sobic.002G316600 expressed protein -
11 Sobic.009G251500 chromosome segregation protein sudA, putative, expressed K06669: SMC3, structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
12 Sobic.010G148932 - -
13 Sobic.002G133300 ZOS9-20 - C2H2 zinc finger protein, expressed K14400: pre-mRNA cleavage complex 2 protein Pcf11
14 Sobic.002G429300 importin subunit beta, putative, expressed -
15 Sobic.001G493700 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed -
16 Sobic.003G205200 expressed protein K19027: zinc finger FYVE domain-containing protein 26
17 Sobic.002G179400 DNA binding protein, putative, expressed -
18 Sobic.002G042600 ubiquitin carboxyl-terminal hydrolase, putative, expressed K11838: USP7, ubiquitin carboxyl-terminal hydrolase 7
19 Sobic.001G194200 diacylglycerol kinase, putative, expressed -
20 Sobic.001G004400 - K14290: XPO1, exportin-1


Gene co-expression network
sample Sobic010G169600 Sobic010G169600 Sobic003G186000 Sobic003G186000 Sobic010G169600--Sobic003G186000 Sobic004G276400 Sobic004G276400 Sobic010G169600--Sobic004G276400 Sobic008G098900 Sobic008G098900 Sobic010G169600--Sobic008G098900 Sobic001G370900 Sobic001G370900 Sobic010G169600--Sobic001G370900 Sobic002G308700 Sobic002G308700 Sobic010G169600--Sobic002G308700 Sobic008G085300 Sobic008G085300 Sobic010G169600--Sobic008G085300 Sobic006G184900 Sobic006G184900 Sobic010G169600--Sobic006G184900 Sobic004G223000 Sobic004G223000 Sobic010G169600--Sobic004G223000 Sobic005G162500 Sobic005G162500 Sobic010G169600--Sobic005G162500 Sobic003G186000--Sobic004G276400 Sobic010G105200 Sobic010G105200 Sobic003G186000--Sobic010G105200 Sobic010G010700 Sobic010G010700 Sobic003G186000--Sobic010G010700 Sobic005G001000 Sobic005G001000 Sobic003G186000--Sobic005G001000 Sobic003G205200 Sobic003G205200 Sobic003G186000--Sobic003G205200 Sobic001G194200 Sobic001G194200 Sobic003G186000--Sobic001G194200 Sobic007G062800 Sobic007G062800 Sobic003G186000--Sobic007G062800 Sobic008G001200 Sobic008G001200 Sobic003G186000--Sobic008G001200 Sobic007G103100 Sobic007G103100 Sobic003G186000--Sobic007G103100 Sobic004G276400--Sobic003G186000 Sobic004G276400--Sobic010G010700 Sobic004G276400--Sobic010G105200 Sobic004G276400--Sobic001G194200 Sobic004G034900 Sobic004G034900 Sobic004G276400--Sobic004G034900 Sobic004G276400--Sobic007G062800 Sobic004G291900 Sobic004G291900 Sobic004G276400--Sobic004G291900 Sobic004G242400 Sobic004G242400 Sobic004G276400--Sobic004G242400 Sobic004G276400--Sobic008G001200 Sobic008G098900--Sobic001G370900 Sobic008G098900--Sobic008G085300 Sobic001G117200 Sobic001G117200 Sobic008G098900--Sobic001G117200 Sobic008G098900--Sobic003G205200 Sobic008G098900--Sobic005G001000 Sobic003G072200 Sobic003G072200 Sobic008G098900--Sobic003G072200 Sobic008G098900--Sobic005G162500 Sobic002G042600 Sobic002G042600 Sobic008G098900--Sobic002G042600 Sobic008G098900--Sobic004G276400 Sobic001G370900--Sobic008G098900 Sobic001G370900--Sobic005G001000 Sobic009G256400 Sobic009G256400 Sobic001G370900--Sobic009G256400 Sobic002G146300 Sobic002G146300 Sobic001G370900--Sobic002G146300 Sobic001G370900--Sobic003G205200 Sobic001G370900--Sobic001G194200 Sobic001G370900--Sobic004G276400 Sobic001G370900--Sobic008G001200 Sobic001G457800 Sobic001G457800 Sobic001G370900--Sobic001G457800 Sobic002G308700--Sobic003G186000 Sobic002G308700--Sobic004G276400 Sobic002G308700--Sobic005G162500 Sobic002G308700--Sobic010G105200 Sobic004G334300 Sobic004G334300 Sobic002G308700--Sobic004G334300 Sobic002G133300 Sobic002G133300 Sobic002G308700--Sobic002G133300 Sobic002G308700--Sobic001G457800 Sobic001G151100 Sobic001G151100 Sobic002G308700--Sobic001G151100 Sobic002G316600 Sobic002G316600 Sobic002G308700--Sobic002G316600 Sobic008G085300--Sobic008G098900 Sobic001G542500 Sobic001G542500 Sobic008G085300--Sobic001G542500 Sobic008G085300--Sobic005G162500 Sobic008G085300--Sobic004G276400 Sobic008G092600 Sobic008G092600 Sobic008G085300--Sobic008G092600 Sobic002G147600 Sobic002G147600 Sobic008G085300--Sobic002G147600 Sobic008G085300--Sobic003G186000 Sobic008G085300--Sobic001G370900 Sobic008G085300--Sobic004G291900 Sobic002G335600 Sobic002G335600 Sobic006G184900--Sobic002G335600 Sobic002G429300 Sobic002G429300 Sobic006G184900--Sobic002G429300 Sobic008G088872 Sobic008G088872 Sobic006G184900--Sobic008G088872 Sobic006G184900--Sobic002G042600 Sobic006G184900--Sobic001G370900 Sobic009G131300 Sobic009G131300 Sobic006G184900--Sobic009G131300 Sobic001G493700 Sobic001G493700 Sobic006G184900--Sobic001G493700 Sobic002G179400 Sobic002G179400 Sobic006G184900--Sobic002G179400 Sobic005G062200 Sobic005G062200 Sobic006G184900--Sobic005G062200 Sobic001G230000 Sobic001G230000 Sobic004G223000--Sobic001G230000 Sobic010G206900 Sobic010G206900 Sobic004G223000--Sobic010G206900 Sobic004G223000--Sobic003G186000 Sobic004G223000--Sobic002G316600 Sobic001G527800 Sobic001G527800 Sobic004G223000--Sobic001G527800 Sobic004G223000--Sobic007G062800 Sobic004G223000--Sobic004G276400 Sobic004G223000--Sobic010G010700 Sobic004G223000--Sobic001G370900 Sobic005G162500--Sobic001G493700 Sobic005G162500--Sobic002G429300 Sobic005G162500--Sobic001G370900 Sobic005G162500--Sobic009G131300 Sobic005G162500--Sobic008G088872 Sobic005G162500--Sobic003G186000 Sobic005G162500--Sobic008G098900 Sobic005G162500--Sobic004G276400 Sobic005G162500--Sobic002G335600
Octagon: transcription factors


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