Gene annotation
Transcriptome id Sobic.006G233500.2,Sobic.006G233500.4,Sobic.006G233500.3,Sobic.006G233500.1,Sobic.006G233500.5
Synonym OBF4, TGA4, Sb06g030100
Functional annotation transcription factor, putative, expressed
UniProt A0A1B6PNH5
Pfam PF00170 PF14144
Panther DB PTHR22952 PTHR22952:SF188
NCBI CDD -
KEGG Orthology K14431; transcription factor TGA
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity GO:0006351transcription, DNA-templated


Orthologs (automatic annotation)
TAIR AT5G10030 : TGACG motif-binding factor 4
RAP-DB (Rice) LOC_Os04g54474.1 : transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a057149 , Zm00025a009614
Brachypodium KQJ84872 , KQJ84861
Barley HORVU2Hr1G116090.7 , HORVU2Hr1G116090.6 , HORVU2Hr1G116090.5 , HORVU2Hr1G116090.4 , HORVU2Hr1G116090.2 , HORVU2Hr1G116090.9 , HORVU2Hr1G116090.8
Wheat TraesCS2A02G526300 , TraesCS2B02G556600 , TraesCS2D02G529000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G087700 T-complex protein 11, putative, expressed -
2 Sobic.003G320700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.007G004500 phosphatidylinositol-4-phosphate 5-Kinase, putative, expressed K00921: PIKFYVE, 1-phosphatidylinositol-3-phosphate 5-kinase
4 Sobic.003G317500 acyltransferase, putative, expressed K13513: LCLAT1, lysocardiolipin and lysophospholipid acyltransferase
5 Sobic.003G301900 phosphatidate cytidylyltransferase, putative, expressed K00981: E2.7.7.41, CDS1, CDS2, phosphatidate cytidylyltransferase
6 Sobic.008G094400 Nodulin MtN3 family protein(PubMedID : 26465154)@Nodulin MtN3 family protein(PubMedID : 26465154)@Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
7 Sobic.003G322700 expressed protein -
8 Sobic.003G051600 universal stress protein domain containing protein, putative, expressed -
9 Sobic.002G266000 ankyrin repeat-containing protein, putative, expressed -
10 Sobic.009G133500 expressed protein -
11 Sobic.007G075400 expressed protein -
12 Sobic.001G462500 natural resistance-associated macrophage protein, putative, expressed K12347: SLC11A1, natural resistance-associated macrophage protein 1
13 Sobic.002G352800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@lactose permease-related, putative, expressed -
14 Sobic.004G065000 expressed protein -
15 Sobic.010G139600 STE_PAK_Ste20_STLK.5 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08835: OXSR1, serine/threonine-protein kinase OSR1/STK39
16 Sobic.001G496100 - -
17 Sobic.006G043600 cysteine proteinase 1 precursor, putative, expressed K01373: cathepsin F
18 Sobic.003G317400 Diacylglycerol kinase DGK (Os)(PubMedID : 27208977)@diacylglycerol kinase, putative, expressed K04718: sphingosine kinase
19 Sobic.009G006400 auxin-induced protein 5NG4, putative, expressed -
20 Sobic.009G193700 transmembrane protein 56, putative, expressed -


Gene co-expression network
sample Sobic006G233500 Sobic006G233500 Sobic006G087700 Sobic006G087700 Sobic006G233500--Sobic006G087700 Sobic003G320700 Sobic003G320700 Sobic006G233500--Sobic003G320700 Sobic007G004500 Sobic007G004500 Sobic006G233500--Sobic007G004500 Sobic003G317500 Sobic003G317500 Sobic006G233500--Sobic003G317500 Sobic003G301900 Sobic003G301900 Sobic006G233500--Sobic003G301900 Sobic008G094400 Sobic008G094400 Sobic006G233500--Sobic008G094400 Sobic003G322700 Sobic003G322700 Sobic006G233500--Sobic003G322700 Sobic003G051600 Sobic003G051600 Sobic006G233500--Sobic003G051600 Sobic002G266000 Sobic002G266000 Sobic006G233500--Sobic002G266000 Sobic007G075400 Sobic007G075400 Sobic006G087700--Sobic007G075400 Sobic006G087700--Sobic003G322700 Sobic006G087700--Sobic006G233500 Sobic010G139600 Sobic010G139600 Sobic006G087700--Sobic010G139600 Sobic006G087700--Sobic003G301900 Sobic006G087700--Sobic003G320700 Sobic006G204900 Sobic006G204900 Sobic006G087700--Sobic006G204900 Sobic002G128200 Sobic002G128200 Sobic006G087700--Sobic002G128200 Sobic006G043600 Sobic006G043600 Sobic006G087700--Sobic006G043600 Sobic003G320700--Sobic003G301900 Sobic006G104600 Sobic006G104600 Sobic003G320700--Sobic006G104600 Sobic001G517800 Sobic001G517800 Sobic003G320700--Sobic001G517800 Sobic001G436900 Sobic001G436900 Sobic003G320700--Sobic001G436900 Sobic003G320700--Sobic007G075400 Sobic003G320700--Sobic006G204900 Sobic003G320700--Sobic006G087700 Sobic003G320700--Sobic003G322700 Sobic009G193700 Sobic009G193700 Sobic003G320700--Sobic009G193700 Sobic007G004500--Sobic002G266000 Sobic002G430000 Sobic002G430000 Sobic007G004500--Sobic002G430000 Sobic001G085300 Sobic001G085300 Sobic007G004500--Sobic001G085300 Sobic001G390800 Sobic001G390800 Sobic007G004500--Sobic001G390800 Sobic001G016700 Sobic001G016700 Sobic007G004500--Sobic001G016700 Sobic007G004500--Sobic003G322700 Sobic007G004500--Sobic010G139600 Sobic004G065000 Sobic004G065000 Sobic007G004500--Sobic004G065000 Sobic009G133500 Sobic009G133500 Sobic007G004500--Sobic009G133500 Sobic003G317500--Sobic003G301900 Sobic003G317500--Sobic001G517800 Sobic003G317500--Sobic003G320700 Sobic003G434900 Sobic003G434900 Sobic003G317500--Sobic003G434900 Sobic003G317500--Sobic006G087700 Sobic005G149200 Sobic005G149200 Sobic003G317500--Sobic005G149200 Sobic003G317500--Sobic010G139600 Sobic009G011600 Sobic009G011600 Sobic003G317500--Sobic009G011600 Sobic003G317500--Sobic006G233500 Sobic002G146300 Sobic002G146300 Sobic003G301900--Sobic002G146300 Sobic003G301900--Sobic001G517800 Sobic003G301900--Sobic010G139600 Sobic003G190400 Sobic003G190400 Sobic003G301900--Sobic003G190400 Sobic003G301900--Sobic005G149200 Sobic003G301900--Sobic003G320700 Sobic006G219600 Sobic006G219600 Sobic003G301900--Sobic006G219600 Sobic003G301900--Sobic006G087700 Sobic007G190000 Sobic007G190000 Sobic003G301900--Sobic007G190000 Sobic003G372500 Sobic003G372500 Sobic008G094400--Sobic003G372500 Sobic001G268200 Sobic001G268200 Sobic008G094400--Sobic001G268200 Sobic007G020600 Sobic007G020600 Sobic008G094400--Sobic007G020600 Sobic008G094400--Sobic006G087700 Sobic008G094400--Sobic006G233500 Sobic010G196500 Sobic010G196500 Sobic008G094400--Sobic010G196500 Sobic004G179300 Sobic004G179300 Sobic008G094400--Sobic004G179300 Sobic008G094400--Sobic001G390800 Sobic004G233200 Sobic004G233200 Sobic008G094400--Sobic004G233200 Sobic003G322700--Sobic002G266000 Sobic003G322700--Sobic006G204900 Sobic010G001500 Sobic010G001500 Sobic003G322700--Sobic010G001500 Sobic004G355000 Sobic004G355000 Sobic003G322700--Sobic004G355000 Sobic001G207400 Sobic001G207400 Sobic003G322700--Sobic001G207400 Sobic003G355600 Sobic003G355600 Sobic003G322700--Sobic003G355600 Sobic003G322700--Sobic006G087700 Sobic006G199000 Sobic006G199000 Sobic003G322700--Sobic006G199000 Sobic004G034600 Sobic004G034600 Sobic003G322700--Sobic004G034600 Sobic007G210500 Sobic007G210500 Sobic003G051600--Sobic007G210500 Sobic003G051600--Sobic002G266000 Sobic001G282600 Sobic001G282600 Sobic003G051600--Sobic001G282600 Sobic006G214200 Sobic006G214200 Sobic003G051600--Sobic006G214200 Sobic006G064600 Sobic006G064600 Sobic003G051600--Sobic006G064600 Sobic003G051600--Sobic003G320700 Sobic003G051600--Sobic006G233500 Sobic001G462500 Sobic001G462500 Sobic003G051600--Sobic001G462500 Sobic001G409300 Sobic001G409300 Sobic003G051600--Sobic001G409300 Sobic002G266000--Sobic003G322700 Sobic002G266000--Sobic001G282600 Sobic002G266000--Sobic006G104600 Sobic002G249200 Sobic002G249200 Sobic002G266000--Sobic002G249200 Sobic004G261900 Sobic004G261900 Sobic002G266000--Sobic004G261900 Sobic002G266000--Sobic007G004500 Sobic002G266000--Sobic004G034600 Sobic005G149700 Sobic005G149700 Sobic002G266000--Sobic005G149700 Sobic004G225200 Sobic004G225200 Sobic002G266000--Sobic004G225200
Octagon: transcription factors


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