Gene annotation
Transcriptome id Sobic.003G051600.1
Synonym Sb03g004490
Functional annotation universal stress protein domain containing protein, putative, expressed
UniProt C5XNF8
Pfam PF00582
Panther DB PTHR31964 PTHR31964:SF54
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006950; response to stress


Orthologs (automatic annotation)
TAIR AT3G17020 : Adenine nucleotide alpha hydrolases-like superfamily protein
RAP-DB (Rice) LOC_Os01g07590.1 : universal stress protein domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a035721
Brachypodium KQK02909
Barley -
Wheat TraesCS3B02G107200 , TraesCS3D02G091900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G210500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ABC transporter, ATP-binding protein, putative, expressed -
2 Sobic.002G266000 ankyrin repeat-containing protein, putative, expressed -
3 Sobic.001G282600 transporter family protein, putative, expressed -
4 Sobic.006G214200 aminotransferase, putative, expressed K16871: 4-aminobutyrate---pyruvate transaminase
5 Sobic.006G064600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AMP-binding enzyme, putative, expressed K01895: ACSS1_2, acetyl-CoA synthetase
6 Sobic.003G320700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.006G233500 transcription factor, putative, expressed K14431: transcription factor TGA
8 Sobic.001G462500 natural resistance-associated macrophage protein, putative, expressed K12347: SLC11A1, natural resistance-associated macrophage protein 1
9 Sobic.001G409300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@phosphatidylinositol transfer protein alpha isoform, putative, expressed -
10 Sobic.003G257100 YT521-B-like family domain containing protein, expressed -
11 Sobic.006G104600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.001G305500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.003G317500 acyltransferase, putative, expressed K13513: LCLAT1, lysocardiolipin and lysophospholipid acyltransferase
14 Sobic.006G087700 T-complex protein 11, putative, expressed -
15 Sobic.003G355600 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
16 Sobic.002G262300 lecithine cholesterol acyltransferase, putative, expressed -
17 Sobic.007G004500 phosphatidylinositol-4-phosphate 5-Kinase, putative, expressed K00921: PIKFYVE, 1-phosphatidylinositol-3-phosphate 5-kinase
18 Sobic.003G322700 expressed protein -
19 Sobic.008G059100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@amino acid transporter, putative, expressed -
20 Sobic.004G211866 - -


Gene co-expression network
sample Sobic003G051600 Sobic003G051600 Sobic007G210500 Sobic007G210500 Sobic003G051600--Sobic007G210500 Sobic002G266000 Sobic002G266000 Sobic003G051600--Sobic002G266000 Sobic001G282600 Sobic001G282600 Sobic003G051600--Sobic001G282600 Sobic006G214200 Sobic006G214200 Sobic003G051600--Sobic006G214200 Sobic006G064600 Sobic006G064600 Sobic003G051600--Sobic006G064600 Sobic003G320700 Sobic003G320700 Sobic003G051600--Sobic003G320700 Sobic006G233500 Sobic006G233500 Sobic003G051600--Sobic006G233500 Sobic001G462500 Sobic001G462500 Sobic003G051600--Sobic001G462500 Sobic001G409300 Sobic001G409300 Sobic003G051600--Sobic001G409300 Sobic007G210500--Sobic001G282600 Sobic002G262300 Sobic002G262300 Sobic007G210500--Sobic002G262300 Sobic009G080400 Sobic009G080400 Sobic007G210500--Sobic009G080400 Sobic010G169000 Sobic010G169000 Sobic007G210500--Sobic010G169000 Sobic001G305500 Sobic001G305500 Sobic007G210500--Sobic001G305500 Sobic007G210500--Sobic003G051600 Sobic006G104600 Sobic006G104600 Sobic007G210500--Sobic006G104600 Sobic001G217400 Sobic001G217400 Sobic007G210500--Sobic001G217400 Sobic004G225200 Sobic004G225200 Sobic007G210500--Sobic004G225200 Sobic003G322700 Sobic003G322700 Sobic002G266000--Sobic003G322700 Sobic002G266000--Sobic001G282600 Sobic002G266000--Sobic006G104600 Sobic002G249200 Sobic002G249200 Sobic002G266000--Sobic002G249200 Sobic004G261900 Sobic004G261900 Sobic002G266000--Sobic004G261900 Sobic007G004500 Sobic007G004500 Sobic002G266000--Sobic007G004500 Sobic004G034600 Sobic004G034600 Sobic002G266000--Sobic004G034600 Sobic005G149700 Sobic005G149700 Sobic002G266000--Sobic005G149700 Sobic002G266000--Sobic004G225200 Sobic001G282600--Sobic002G266000 Sobic001G282600--Sobic006G104600 Sobic006G199000 Sobic006G199000 Sobic001G282600--Sobic006G199000 Sobic001G282600--Sobic004G225200 Sobic001G282600--Sobic007G210500 Sobic004G329300 Sobic004G329300 Sobic001G282600--Sobic004G329300 Sobic008G153400 Sobic008G153400 Sobic001G282600--Sobic008G153400 Sobic003G355600 Sobic003G355600 Sobic001G282600--Sobic003G355600 Sobic001G282600--Sobic003G322700 Sobic003G257100 Sobic003G257100 Sobic006G214200--Sobic003G257100 Sobic009G029600 Sobic009G029600 Sobic006G214200--Sobic009G029600 Sobic010G107000 Sobic010G107000 Sobic006G214200--Sobic010G107000 Sobic006G214200--Sobic008G153400 Sobic006G214200--Sobic003G355600 Sobic009G211400 Sobic009G211400 Sobic006G214200--Sobic009G211400 Sobic006G214200--Sobic006G199000 Sobic006G204900 Sobic006G204900 Sobic006G214200--Sobic006G204900 Sobic003G138200 Sobic003G138200 Sobic006G214200--Sobic003G138200 Sobic006G064600--Sobic003G257100 Sobic006G064600--Sobic002G266000 Sobic006G064600--Sobic003G320700 Sobic001G517800 Sobic001G517800 Sobic006G064600--Sobic001G517800 Sobic006G064600--Sobic003G322700 Sobic006G064600--Sobic001G462500 Sobic003G301900 Sobic003G301900 Sobic006G064600--Sobic003G301900 Sobic006G064600--Sobic003G051600 Sobic006G064600--Sobic001G305500 Sobic003G320700--Sobic003G301900 Sobic003G320700--Sobic006G104600 Sobic003G320700--Sobic001G517800 Sobic001G436900 Sobic001G436900 Sobic003G320700--Sobic001G436900 Sobic007G075400 Sobic007G075400 Sobic003G320700--Sobic007G075400 Sobic003G320700--Sobic006G204900 Sobic006G087700 Sobic006G087700 Sobic003G320700--Sobic006G087700 Sobic003G320700--Sobic003G322700 Sobic009G193700 Sobic009G193700 Sobic003G320700--Sobic009G193700 Sobic006G233500--Sobic006G087700 Sobic006G233500--Sobic003G320700 Sobic006G233500--Sobic007G004500 Sobic003G317500 Sobic003G317500 Sobic006G233500--Sobic003G317500 Sobic006G233500--Sobic003G301900 Sobic008G094400 Sobic008G094400 Sobic006G233500--Sobic008G094400 Sobic006G233500--Sobic003G322700 Sobic006G233500--Sobic003G051600 Sobic006G233500--Sobic002G266000 Sobic001G462500--Sobic002G266000 Sobic001G462500--Sobic006G204900 Sobic001G462500--Sobic003G322700 Sobic004G265800 Sobic004G265800 Sobic001G462500--Sobic004G265800 Sobic001G016700 Sobic001G016700 Sobic001G462500--Sobic001G016700 Sobic001G462500--Sobic007G004500 Sobic004G266400 Sobic004G266400 Sobic001G462500--Sobic004G266400 Sobic001G462500--Sobic006G087700 Sobic001G207400 Sobic001G207400 Sobic001G462500--Sobic001G207400 Sobic008G059100 Sobic008G059100 Sobic001G409300--Sobic008G059100 Sobic004G211900 Sobic004G211900 Sobic001G409300--Sobic004G211900 Sobic003G242000 Sobic003G242000 Sobic001G409300--Sobic003G242000 Sobic001G409300--Sobic001G217400 Sobic010G272200 Sobic010G272200 Sobic001G409300--Sobic010G272200 Sobic001G409300--Sobic003G051600 Sobic003G269800 Sobic003G269800 Sobic001G409300--Sobic003G269800 Sobic003G397500 Sobic003G397500 Sobic001G409300--Sobic003G397500 Sobic009G136100 Sobic009G136100 Sobic001G409300--Sobic009G136100
Octagon: transcription factors


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