Gene annotation
Transcriptome id Sobic.007G210500.1,Sobic.007G210500.3,Sobic.007G210500.2
Synonym ATMRP14, MRP14, Sb07g027770
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
ABC transporter, ATP-binding protein, putative, expressed
UniProt A0A1B6PJ33
Pfam PF00664 PF00005
Panther DB PTHR24223 PTHR24223:SF192
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane GO:0006810transport GO:0005524ATP binding GO:0016887ATPase activity


Orthologs (automatic annotation)
TAIR AT3G59140 : multidrug resistance-associated protein 14
RAP-DB (Rice) LOC_Os06g06440.1 : ABC transporter, ATP-binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a005094 , Zm00025a049971 , Zm00025a049962
Brachypodium KQK19506 , KQK19507 , KQK19501 , KQK19509 , PNT76486
Barley HORVU7Hr1G024960.12 , HORVU7Hr1G024960.10 , HORVU7Hr1G024960.11 , HORVU7Hr1G025040.10 , HORVU7Hr1G025000.8 , HORVU7Hr1G025000.9 , HORVU7Hr1G025000.3 , HORVU7Hr1G025110.8 , HORVU7Hr1G024960.8 , HORVU7Hr1G024960.9 , HORVU7Hr1G024960.4 , HORVU7Hr1G024960.5 , HORVU7Hr1G024960.6 , HORVU7Hr1G024960.7 , HORVU7Hr1G024960.1 , HORVU7Hr1G024960.2 , HORVU7Hr1G024960.3 , HORVU7Hr1G025140.1 , HORVU2Hr1G022560.14 , HORVU7Hr1G024980.8 , HORVU7Hr1G024980.9 , HORVU7Hr1G024980.6 , HORVU7Hr1G024980.7 , HORVU7Hr1G024980.4 , HORVU7Hr1G024980.5 , HORVU7Hr1G024980.2 , HORVU7Hr1G024980.3 , HORVU7Hr1G024980.1 , HORVU2Hr1G022560.16 , HORVU7Hr1G025230.5 , HORVU7Hr1G025230.4 , HORVU7Hr1G025230.3 , HORVU7Hr1G025230.2 , HORVU7Hr1G025230.1 , HORVU7Hr1G025110.9 , HORVU7Hr1G025110.2 , HORVU7Hr1G025110.1 , HORVU7Hr1G025110.6 , HORVU7Hr1G025110.7 , HORVU7Hr1G025110.4 , HORVU7Hr1G025110.5 , HORVU7Hr1G025000.27 , HORVU7Hr1G025000.26 , HORVU7Hr1G025000.24 , HORVU7Hr1G025000.23 , HORVU7Hr1G025000.22 , HORVU7Hr1G025000.21 , HORVU7Hr1G025000.20 , HORVU7Hr1G025000.29 , HORVU7Hr1G025000.28 , HORVU7Hr1G025040.8 , HORVU7Hr1G025040.9 , HORVU7Hr1G025040.1 , HORVU7Hr1G025040.2 , HORVU7Hr1G025040.5 , HORVU7Hr1G025040.6 , HORVU7Hr1G025040.7 , HORVU2Hr1G022560.9 , HORVU2Hr1G022560.3 , HORVU2Hr1G022560.2 , HORVU2Hr1G022560.1 , HORVU2Hr1G022560.7 , HORVU2Hr1G022560.6 , HORVU2Hr1G022560.5 , HORVU2Hr1G022560.4 , HORVU7Hr1G024980.14 , HORVU7Hr1G024980.15 , HORVU7Hr1G024980.10 , HORVU7Hr1G024980.11 , HORVU7Hr1G024980.12 , HORVU7Hr1G024980.13 , HORVU7Hr1G025000.30 , HORVU7Hr1G025000.31 , HORVU7Hr1G025000.32 , HORVU7Hr1G025000.18 , HORVU7Hr1G025000.19 , HORVU7Hr1G025000.6 , HORVU7Hr1G025000.7 , HORVU2Hr1G022560.18 , HORVU2Hr1G022560.13 , HORVU2Hr1G022560.12 , HORVU2Hr1G022560.11 , HORVU2Hr1G022560.10 , HORVU7Hr1G025000.16 , HORVU7Hr1G025000.17 , HORVU7Hr1G025000.14 , HORVU7Hr1G025000.15 , HORVU7Hr1G025000.12 , HORVU7Hr1G025000.13 , HORVU7Hr1G025000.10 , HORVU7Hr1G025000.11 , HORVU7Hr1G025110.10 , HORVU7Hr1G025110.11 , HORVU7Hr1G025110.12 , HORVU7Hr1G025110.3
Wheat TraesCS7D02G115100 , TraesCSU02G095500 , TraesCS7D02G116200 , TraesCS7D02G116100 , TraesCSU02G093000 , TraesCSU02G093000 , TraesCSU02G093000 , TraesCSU02G093000 , TraesCSU02G093000 , TraesCSU02G093000 , TraesCS7B02G016100 , TraesCS7D02G115300 , TraesCS7A02G118900 , TraesCS7D02G115900 , TraesCS7B02G016500 , TraesCSU02G159700 , TraesCS7D02G114100 , TraesCS7D02G114100 , TraesCS7D02G114100 , TraesCS7D02G114100 , TraesCS7A02G118900 , TraesCS7B02G016300 , TraesCSU02G095900 , TraesCSU02G095900 , TraesCSU02G093100 , TraesCS7D02G116300 , TraesCS7D02G116300 , TraesCS7B02G015400 , TraesCSU02G095900 , TraesCS7B02G016300 , TraesCS4B02G088500 , TraesCS4A02G227600 , TraesCS7A02G119000 , TraesCS2D02G131000 , TraesCS2D02G131000 , TraesCS7B02G016400 , TraesCS7B02G016400 , TraesCS7D02G117000 , TraesCS2B02G150600 , TraesCS7A02G119100 , TraesCS2B02G529000 , TraesCS2B02G529000 , TraesCS2B02G529000 , TraesCS7B02G016200 , TraesCS1A02G039700 , TraesCS2A02G128500 , TraesCS7A02G118800 , TraesCS7A02G118800 , TraesCS7A02G118800 , TraesCS7A02G118800 , TraesCS7A02G119300 , TraesCS7D02G114200 , TraesCS7D02G116000 , TraesCS2B02G528900 , TraesCS2B02G528900 , TraesCS2B02G528900 , TraesCS4D02G085800 , TraesCS7D02G114300 , TraesCS7A02G119800 , TraesCS7B02G017500 , TraesCS7A02G119500
Populus -


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cDNA sequences
Sobic.007G210500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G282600 transporter family protein, putative, expressed -
2 Sobic.002G262300 lecithine cholesterol acyltransferase, putative, expressed -
3 Sobic.009G080400 hydroquinone glucosyltransferase, putative, expressed K08237: hydroquinone glucosyltransferase
4 Sobic.010G169000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Multi-drugresistance-associated protein 6(PubMedID : 26320239)@ABC transporter, ATP-binding protein, putative, expressed -
5 Sobic.001G305500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.003G051600 universal stress protein domain containing protein, putative, expressed -
7 Sobic.006G104600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.001G217400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF1336 domain containing protein, expressed -
9 Sobic.004G225200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein nitrilase 4 NIT4 (Os)(PubMedID : 27208977)@nitrilase, putative, expressed K13035: beta-cyano-L-alanine hydratase/nitrilase
10 Sobic.003G355600 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
11 Sobic.006G214200 aminotransferase, putative, expressed K16871: 4-aminobutyrate---pyruvate transaminase
12 Sobic.003G257100 YT521-B-like family domain containing protein, expressed -
13 Sobic.006G199000 pathogenesis-related Bet v I family protein, putative, expressed -
14 Sobic.002G266000 ankyrin repeat-containing protein, putative, expressed -
15 Sobic.009G029600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutamate--cysteine ligase, chloroplast precursor, putative, expressed K01919: glutamate--cysteine ligase
16 Sobic.010G227300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
17 Sobic.004G329300 leucine aminopeptidase, chloroplast precursor, putative, expressed K01255: CARP, leucyl aminopeptidase
18 Sobic.003G320700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.004G211866 - -
20 Sobic.010G107000 phosphatidylinositol-4-phosphate 5-Kinase family protein, putative, expressed K00921: PIKFYVE, 1-phosphatidylinositol-3-phosphate 5-kinase


Gene co-expression network
sample Sobic007G210500 Sobic007G210500 Sobic001G282600 Sobic001G282600 Sobic007G210500--Sobic001G282600 Sobic002G262300 Sobic002G262300 Sobic007G210500--Sobic002G262300 Sobic009G080400 Sobic009G080400 Sobic007G210500--Sobic009G080400 Sobic010G169000 Sobic010G169000 Sobic007G210500--Sobic010G169000 Sobic001G305500 Sobic001G305500 Sobic007G210500--Sobic001G305500 Sobic003G051600 Sobic003G051600 Sobic007G210500--Sobic003G051600 Sobic006G104600 Sobic006G104600 Sobic007G210500--Sobic006G104600 Sobic001G217400 Sobic001G217400 Sobic007G210500--Sobic001G217400 Sobic004G225200 Sobic004G225200 Sobic007G210500--Sobic004G225200 Sobic002G266000 Sobic002G266000 Sobic001G282600--Sobic002G266000 Sobic001G282600--Sobic006G104600 Sobic006G199000 Sobic006G199000 Sobic001G282600--Sobic006G199000 Sobic001G282600--Sobic004G225200 Sobic001G282600--Sobic007G210500 Sobic004G329300 Sobic004G329300 Sobic001G282600--Sobic004G329300 Sobic008G153400 Sobic008G153400 Sobic001G282600--Sobic008G153400 Sobic003G355600 Sobic003G355600 Sobic001G282600--Sobic003G355600 Sobic003G322700 Sobic003G322700 Sobic001G282600--Sobic003G322700 Sobic002G262300--Sobic007G210500 Sobic002G262300--Sobic009G080400 Sobic002G262300--Sobic001G305500 Sobic002G262300--Sobic006G104600 Sobic002G128200 Sobic002G128200 Sobic002G262300--Sobic002G128200 Sobic003G320700 Sobic003G320700 Sobic002G262300--Sobic003G320700 Sobic001G517800 Sobic001G517800 Sobic002G262300--Sobic001G517800 Sobic003G242000 Sobic003G242000 Sobic002G262300--Sobic003G242000 Sobic001G062300 Sobic001G062300 Sobic002G262300--Sobic001G062300 Sobic009G080400--Sobic002G262300 Sobic009G080400--Sobic007G210500 Sobic009G080400--Sobic001G062300 Sobic010G272800 Sobic010G272800 Sobic009G080400--Sobic010G272800 Sobic009G080400--Sobic004G329300 Sobic009G080400--Sobic001G282600 Sobic009G080400--Sobic006G104600 Sobic004G211866 Sobic004G211866 Sobic009G080400--Sobic004G211866 Sobic003G442601 Sobic003G442601 Sobic009G080400--Sobic003G442601 Sobic010G169000--Sobic004G329300 Sobic010G169000--Sobic007G210500 Sobic010G169000--Sobic001G282600 Sobic004G042300 Sobic004G042300 Sobic010G169000--Sobic004G042300 Sobic010G169000--Sobic001G217400 Sobic004G053700 Sobic004G053700 Sobic010G169000--Sobic004G053700 Sobic006G214200 Sobic006G214200 Sobic010G169000--Sobic006G214200 Sobic010G107000 Sobic010G107000 Sobic010G169000--Sobic010G107000 Sobic010G169000--Sobic003G355600 Sobic001G305500--Sobic006G104600 Sobic001G305500--Sobic002G262300 Sobic001G207400 Sobic001G207400 Sobic001G305500--Sobic001G207400 Sobic003G398100 Sobic003G398100 Sobic001G305500--Sobic003G398100 Sobic001G305500--Sobic002G266000 Sobic006G087700 Sobic006G087700 Sobic001G305500--Sobic006G087700 Sobic004G314700 Sobic004G314700 Sobic001G305500--Sobic004G314700 Sobic001G305500--Sobic007G210500 Sobic001G305500--Sobic006G199000 Sobic003G051600--Sobic007G210500 Sobic003G051600--Sobic002G266000 Sobic003G051600--Sobic001G282600 Sobic003G051600--Sobic006G214200 Sobic006G064600 Sobic006G064600 Sobic003G051600--Sobic006G064600 Sobic003G051600--Sobic003G320700 Sobic006G233500 Sobic006G233500 Sobic003G051600--Sobic006G233500 Sobic001G462500 Sobic001G462500 Sobic003G051600--Sobic001G462500 Sobic001G409300 Sobic001G409300 Sobic003G051600--Sobic001G409300 Sobic006G104600--Sobic001G282600 Sobic006G104600--Sobic002G266000 Sobic006G104600--Sobic003G320700 Sobic006G104600--Sobic001G305500 Sobic006G104600--Sobic002G128200 Sobic006G104600--Sobic003G322700 Sobic006G104600--Sobic006G199000 Sobic005G149700 Sobic005G149700 Sobic006G104600--Sobic005G149700 Sobic006G104600--Sobic004G225200 Sobic010G072400 Sobic010G072400 Sobic001G217400--Sobic010G072400 Sobic001G350900 Sobic001G350900 Sobic001G217400--Sobic001G350900 Sobic001G350700 Sobic001G350700 Sobic001G217400--Sobic001G350700 Sobic004G211900 Sobic004G211900 Sobic001G217400--Sobic004G211900 Sobic003G269800 Sobic003G269800 Sobic001G217400--Sobic003G269800 Sobic001G217400--Sobic003G320700 Sobic001G217400--Sobic007G210500 Sobic003G101850 Sobic003G101850 Sobic001G217400--Sobic003G101850 Sobic006G271200 Sobic006G271200 Sobic001G217400--Sobic006G271200 Sobic004G225100 Sobic004G225100 Sobic004G225200--Sobic004G225100 Sobic004G225200--Sobic001G282600 Sobic004G225200--Sobic002G266000 Sobic004G225200--Sobic006G199000 Sobic004G225200--Sobic003G398100 Sobic004G225200--Sobic006G104600 Sobic004G071200 Sobic004G071200 Sobic004G225200--Sobic004G071200 Sobic004G225200--Sobic003G322700 Sobic005G178100 Sobic005G178100 Sobic004G225200--Sobic005G178100
Octagon: transcription factors


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