Gene annotation
Transcriptome id Sobic.004G225200.1
Synonym Sb04g026950, AtNIT4, NIT4,
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
Protein nitrilase 4 NIT4 (Os) (PubMedID : 27208977)
nitrilase, putative, expressed
UniProt C5XY71
Pfam PF00795
Panther DB PTHR23088 PTHR23088:SF31
NCBI CDD -
KEGG Orthology K13035; beta-cyano-L-alanine hydratase/nitrilase
Gene Ontology GO:0016810; hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds GO:0006807nitrogen compound metabolic process


Orthologs (automatic annotation)
TAIR AT5G22300 : nitrilase 4
RAP-DB (Rice) LOC_Os02g42350.1 : nitrilase, putative, expressed
MaizeGDB (Corn) Zm00025a021016 , Zm00025a032087
Brachypodium KQK00471
Barley HORVU6Hr1G059730.4 , HORVU6Hr1G059730.2 , HORVU6Hr1G059730.3 , HORVU6Hr1G059740.1 , HORVU6Hr1G059740.2 , HORVU6Hr1G059760.2 , HORVU6Hr1G059760.1 , HORVU6Hr1G059730.1
Wheat TraesCS6D02G215300 , TraesCS6D02G215400 , TraesCS6D02G215400 , TraesCS6D02G215400 , TraesCS6B02G260800 , TraesCS6B02G260800 , TraesCS6A02G232300 , TraesCS6B02G260700 , TraesCS6B02G260700 , TraesCS6A02G232400 , TraesCS6A02G232400 , TraesCS6A02G232500 , TraesCS6A02G232500
Populus -


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cDNA sequences
Sobic.004G225200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G225100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein nitrilase 4 NIT4 (Os)(PubMedID : 27208977)@Protein nitrilase 4 NIT4 (Os)(PubMedID : 27208977)@nitrilase, putative, expressed K01501: nitrilase
2 Sobic.001G282600 transporter family protein, putative, expressed -
3 Sobic.002G266000 ankyrin repeat-containing protein, putative, expressed -
4 Sobic.006G199000 pathogenesis-related Bet v I family protein, putative, expressed -
5 Sobic.003G398100 antigen peptide transporter-like 1, chloroplast precursor, putative, expressed -
6 Sobic.006G104600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.004G071200 limonoid UDP-glucosyltransferase, putative, expressed -
8 Sobic.003G322700 expressed protein -
9 Sobic.005G178100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@F-box/Kelch-repeat protein, putative, expressed -
10 Sobic.001G305800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@U-box domain containing protein, expressed -
11 Sobic.004G261900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@diacylglycerol O-acyltransferase, putative, expressed K14457: MOGAT2, 2-acylglycerol O-acyltransferase 2
12 Sobic.008G153400 peptidase, putative, expressed K18151: ureidoglycolate amidohydrolase
13 Sobic.001G504900 pheophorbide a oxygenase, chloroplast precursor, putative, expressed K13071: PAO, pheophorbide a oxygenase
14 Sobic.001G496100 - -
15 Sobic.006G091700 12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
16 Sobic.009G161000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@oxidoreductase, aldo/keto reductase family protein, putative, expressed -
17 Sobic.004G124200 3-hydroxyacyl-CoA dehydrogenase, putative, expressed K10527: enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase
18 Sobic.004G329300 leucine aminopeptidase, chloroplast precursor, putative, expressed K01255: CARP, leucyl aminopeptidase
19 Sobic.001G015500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@inner membrane protein, putative, expressed K03217: yidC, spoIIIJ, OXA1, YidC/Oxa1 family membrane protein insertase
20 Sobic.003G265100 lipid phosphatase protein, putative, expressed -


Gene co-expression network
sample Sobic004G225200 Sobic004G225200 Sobic004G225100 Sobic004G225100 Sobic004G225200--Sobic004G225100 Sobic001G282600 Sobic001G282600 Sobic004G225200--Sobic001G282600 Sobic002G266000 Sobic002G266000 Sobic004G225200--Sobic002G266000 Sobic006G199000 Sobic006G199000 Sobic004G225200--Sobic006G199000 Sobic003G398100 Sobic003G398100 Sobic004G225200--Sobic003G398100 Sobic006G104600 Sobic006G104600 Sobic004G225200--Sobic006G104600 Sobic004G071200 Sobic004G071200 Sobic004G225200--Sobic004G071200 Sobic003G322700 Sobic003G322700 Sobic004G225200--Sobic003G322700 Sobic005G178100 Sobic005G178100 Sobic004G225200--Sobic005G178100 Sobic004G225100--Sobic004G225200 Sobic002G244100 Sobic002G244100 Sobic004G225100--Sobic002G244100 Sobic001G334600 Sobic001G334600 Sobic004G225100--Sobic001G334600 Sobic009G167700 Sobic009G167700 Sobic004G225100--Sobic009G167700 Sobic003G388251 Sobic003G388251 Sobic004G225100--Sobic003G388251 Sobic004G225100--Sobic005G178100 Sobic003G354400 Sobic003G354400 Sobic004G225100--Sobic003G354400 Sobic001G305800 Sobic001G305800 Sobic004G225100--Sobic001G305800 Sobic002G087800 Sobic002G087800 Sobic004G225100--Sobic002G087800 Sobic001G282600--Sobic002G266000 Sobic001G282600--Sobic006G104600 Sobic001G282600--Sobic006G199000 Sobic001G282600--Sobic004G225200 Sobic007G210500 Sobic007G210500 Sobic001G282600--Sobic007G210500 Sobic004G329300 Sobic004G329300 Sobic001G282600--Sobic004G329300 Sobic008G153400 Sobic008G153400 Sobic001G282600--Sobic008G153400 Sobic003G355600 Sobic003G355600 Sobic001G282600--Sobic003G355600 Sobic001G282600--Sobic003G322700 Sobic002G266000--Sobic003G322700 Sobic002G266000--Sobic001G282600 Sobic002G266000--Sobic006G104600 Sobic002G249200 Sobic002G249200 Sobic002G266000--Sobic002G249200 Sobic004G261900 Sobic004G261900 Sobic002G266000--Sobic004G261900 Sobic007G004500 Sobic007G004500 Sobic002G266000--Sobic007G004500 Sobic004G034600 Sobic004G034600 Sobic002G266000--Sobic004G034600 Sobic005G149700 Sobic005G149700 Sobic002G266000--Sobic005G149700 Sobic002G266000--Sobic004G225200 Sobic006G199000--Sobic008G153400 Sobic006G199000--Sobic003G398100 Sobic003G257100 Sobic003G257100 Sobic006G199000--Sobic003G257100 Sobic006G199000--Sobic003G355600 Sobic001G325200 Sobic001G325200 Sobic006G199000--Sobic001G325200 Sobic001G150600 Sobic001G150600 Sobic006G199000--Sobic001G150600 Sobic001G015500 Sobic001G015500 Sobic006G199000--Sobic001G015500 Sobic006G199000--Sobic001G282600 Sobic006G091700 Sobic006G091700 Sobic006G199000--Sobic006G091700 Sobic003G398100--Sobic006G199000 Sobic003G398100--Sobic008G153400 Sobic009G207600 Sobic009G207600 Sobic003G398100--Sobic009G207600 Sobic001G504900 Sobic001G504900 Sobic003G398100--Sobic001G504900 Sobic003G398100--Sobic003G257100 Sobic001G496100 Sobic001G496100 Sobic003G398100--Sobic001G496100 Sobic003G398100--Sobic003G355600 Sobic003G398100--Sobic003G322700 Sobic003G398100--Sobic001G150600 Sobic006G104600--Sobic001G282600 Sobic006G104600--Sobic002G266000 Sobic003G320700 Sobic003G320700 Sobic006G104600--Sobic003G320700 Sobic001G305500 Sobic001G305500 Sobic006G104600--Sobic001G305500 Sobic002G128200 Sobic002G128200 Sobic006G104600--Sobic002G128200 Sobic006G104600--Sobic003G322700 Sobic006G104600--Sobic006G199000 Sobic006G104600--Sobic005G149700 Sobic006G104600--Sobic004G225200 Sobic004G071200--Sobic004G225200 Sobic004G071200--Sobic006G091700 Sobic004G071200--Sobic003G398100 Sobic002G420700 Sobic002G420700 Sobic004G071200--Sobic002G420700 Sobic004G071200--Sobic005G178100 Sobic004G071200--Sobic002G266000 Sobic007G035000 Sobic007G035000 Sobic004G071200--Sobic007G035000 Sobic004G071200--Sobic008G153400 Sobic002G085300 Sobic002G085300 Sobic004G071200--Sobic002G085300 Sobic003G322700--Sobic002G266000 Sobic006G204900 Sobic006G204900 Sobic003G322700--Sobic006G204900 Sobic010G001500 Sobic010G001500 Sobic003G322700--Sobic010G001500 Sobic004G355000 Sobic004G355000 Sobic003G322700--Sobic004G355000 Sobic001G207400 Sobic001G207400 Sobic003G322700--Sobic001G207400 Sobic003G322700--Sobic003G355600 Sobic006G087700 Sobic006G087700 Sobic003G322700--Sobic006G087700 Sobic003G322700--Sobic006G199000 Sobic003G322700--Sobic004G034600 Sobic009G161000 Sobic009G161000 Sobic005G178100--Sobic009G161000 Sobic005G178100--Sobic001G305800 Sobic003G087200 Sobic003G087200 Sobic005G178100--Sobic003G087200 Sobic005G178100--Sobic002G420700 Sobic005G178100--Sobic001G015500 Sobic003G105800 Sobic003G105800 Sobic005G178100--Sobic003G105800 Sobic009G034700 Sobic009G034700 Sobic005G178100--Sobic009G034700 Sobic003G184900 Sobic003G184900 Sobic005G178100--Sobic003G184900 Sobic005G178100--Sobic001G150600
Octagon: transcription factors


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