Gene annotation
Transcriptome id Sobic.004G261900.1
Synonym Sb04g030010
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence (PubMedID : 27586543)
diacylglycerol O-acyltransferase, putative, expressed
UniProt C5XZX1
Pfam PF03982
Panther DB PTHR12317 PTHR12317:SF22
NCBI CDD KOG0831; Acyl-CoA:diacylglycerol acyltransferase (DGAT)
KEGG Orthology K14457; MOGAT2, 2-acylglycerol O-acyltransferase 2
Gene Ontology GO:0016747; transferase activity, transferring acyl groups other than amino-acyl groups


Orthologs (automatic annotation)
TAIR AT3G51520 : diacylglycerol acyltransferase family
RAP-DB (Rice) LOC_Os02g48350.1 : diacylglycerol O-acyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a032514 , Zm00025a050669
Brachypodium KQK01007
Barley -
Wheat -
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.004G261900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G504900 pheophorbide a oxygenase, chloroplast precursor, putative, expressed K13071: PAO, pheophorbide a oxygenase
2 Sobic.002G266000 ankyrin repeat-containing protein, putative, expressed -
3 Sobic.004G034600 hydrolase, alpha/beta fold family domain containing protein, expressed -
4 Sobic.003G322700 expressed protein -
5 Sobic.003G398100 antigen peptide transporter-like 1, chloroplast precursor, putative, expressed -
6 Sobic.004G225200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein nitrilase 4 NIT4 (Os)(PubMedID : 27208977)@nitrilase, putative, expressed K13035: beta-cyano-L-alanine hydratase/nitrilase
7 Sobic.005G149700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
8 Sobic.009G207600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@dnaJ domain containing protein, expressed -
9 Sobic.001G517800 NIN, putative, expressed -
10 Sobic.001G301700 MYB family transcription factor, putative, expressed K09522: DnaJ homolog subfamily C member 2
11 Sobic.001G016700 ion channel DMI1-like, chloroplast precursor, putative, expressed -
12 Sobic.006G104600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.006G199000 pathogenesis-related Bet v I family protein, putative, expressed -
14 Sobic.002G111000 peptidase, putative, expressed -
15 Sobic.001G207400 katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed K18643: katanin p80 WD40 repeat-containing subunit B1
16 Sobic.001G282600 transporter family protein, putative, expressed -
17 Sobic.005G089400 - -
18 Sobic.010G205200 Ser/Thr protein phosphatase family protein, putative, expressed -
19 Sobic.004G071200 limonoid UDP-glucosyltransferase, putative, expressed -
20 Sobic.004G355000 SAC9, putative, expressed -


Gene co-expression network
sample Sobic004G261900 Sobic004G261900 Sobic001G504900 Sobic001G504900 Sobic004G261900--Sobic001G504900 Sobic002G266000 Sobic002G266000 Sobic004G261900--Sobic002G266000 Sobic004G034600 Sobic004G034600 Sobic004G261900--Sobic004G034600 Sobic003G322700 Sobic003G322700 Sobic004G261900--Sobic003G322700 Sobic003G398100 Sobic003G398100 Sobic004G261900--Sobic003G398100 Sobic004G225200 Sobic004G225200 Sobic004G261900--Sobic004G225200 Sobic005G149700 Sobic005G149700 Sobic004G261900--Sobic005G149700 Sobic009G207600 Sobic009G207600 Sobic004G261900--Sobic009G207600 Sobic001G517800 Sobic001G517800 Sobic004G261900--Sobic001G517800 Sobic001G504900--Sobic009G207600 Sobic001G504900--Sobic003G398100 Sobic001G504900--Sobic004G261900 Sobic001G504900--Sobic005G149700 Sobic001G504900--Sobic002G266000 Sobic002G338100 Sobic002G338100 Sobic001G504900--Sobic002G338100 Sobic001G069900 Sobic001G069900 Sobic001G504900--Sobic001G069900 Sobic006G181300 Sobic006G181300 Sobic001G504900--Sobic006G181300 Sobic001G015500 Sobic001G015500 Sobic001G504900--Sobic001G015500 Sobic002G266000--Sobic003G322700 Sobic001G282600 Sobic001G282600 Sobic002G266000--Sobic001G282600 Sobic006G104600 Sobic006G104600 Sobic002G266000--Sobic006G104600 Sobic002G249200 Sobic002G249200 Sobic002G266000--Sobic002G249200 Sobic002G266000--Sobic004G261900 Sobic007G004500 Sobic007G004500 Sobic002G266000--Sobic007G004500 Sobic002G266000--Sobic004G034600 Sobic002G266000--Sobic005G149700 Sobic002G266000--Sobic004G225200 Sobic004G034600--Sobic005G149700 Sobic002G249300 Sobic002G249300 Sobic004G034600--Sobic002G249300 Sobic004G034600--Sobic001G517800 Sobic009G011600 Sobic009G011600 Sobic004G034600--Sobic009G011600 Sobic004G034600--Sobic002G266000 Sobic001G459600 Sobic001G459600 Sobic004G034600--Sobic001G459600 Sobic004G034600--Sobic003G322700 Sobic001G223550 Sobic001G223550 Sobic004G034600--Sobic001G223550 Sobic004G034600--Sobic004G261900 Sobic003G322700--Sobic002G266000 Sobic006G204900 Sobic006G204900 Sobic003G322700--Sobic006G204900 Sobic010G001500 Sobic010G001500 Sobic003G322700--Sobic010G001500 Sobic004G355000 Sobic004G355000 Sobic003G322700--Sobic004G355000 Sobic001G207400 Sobic001G207400 Sobic003G322700--Sobic001G207400 Sobic003G355600 Sobic003G355600 Sobic003G322700--Sobic003G355600 Sobic006G087700 Sobic006G087700 Sobic003G322700--Sobic006G087700 Sobic006G199000 Sobic006G199000 Sobic003G322700--Sobic006G199000 Sobic003G322700--Sobic004G034600 Sobic003G398100--Sobic006G199000 Sobic008G153400 Sobic008G153400 Sobic003G398100--Sobic008G153400 Sobic003G398100--Sobic009G207600 Sobic003G398100--Sobic001G504900 Sobic003G257100 Sobic003G257100 Sobic003G398100--Sobic003G257100 Sobic001G496100 Sobic001G496100 Sobic003G398100--Sobic001G496100 Sobic003G398100--Sobic003G355600 Sobic003G398100--Sobic003G322700 Sobic001G150600 Sobic001G150600 Sobic003G398100--Sobic001G150600 Sobic004G225100 Sobic004G225100 Sobic004G225200--Sobic004G225100 Sobic004G225200--Sobic001G282600 Sobic004G225200--Sobic002G266000 Sobic004G225200--Sobic006G199000 Sobic004G225200--Sobic003G398100 Sobic004G225200--Sobic006G104600 Sobic004G071200 Sobic004G071200 Sobic004G225200--Sobic004G071200 Sobic004G225200--Sobic003G322700 Sobic005G178100 Sobic005G178100 Sobic004G225200--Sobic005G178100 Sobic005G149700--Sobic004G034600 Sobic005G149700--Sobic001G504900 Sobic005G149700--Sobic002G266000 Sobic002G128200 Sobic002G128200 Sobic005G149700--Sobic002G128200 Sobic005G149700--Sobic006G104600 Sobic005G149700--Sobic009G011600 Sobic005G149700--Sobic009G207600 Sobic003G174301 Sobic003G174301 Sobic005G149700--Sobic003G174301 Sobic005G149700--Sobic003G398100 Sobic009G207600--Sobic001G504900 Sobic009G207600--Sobic003G398100 Sobic009G207600--Sobic002G338100 Sobic008G079300 Sobic008G079300 Sobic009G207600--Sobic008G079300 Sobic001G474500 Sobic001G474500 Sobic009G207600--Sobic001G474500 Sobic009G207600--Sobic008G153400 Sobic009G207600--Sobic001G496100 Sobic006G091700 Sobic006G091700 Sobic009G207600--Sobic006G091700 Sobic003G087200 Sobic003G087200 Sobic009G207600--Sobic003G087200 Sobic001G517800--Sobic001G459600 Sobic003G301900 Sobic003G301900 Sobic001G517800--Sobic003G301900 Sobic001G517800--Sobic004G034600 Sobic010G020800 Sobic010G020800 Sobic001G517800--Sobic010G020800 Sobic001G517800--Sobic009G011600 Sobic005G149200 Sobic005G149200 Sobic001G517800--Sobic005G149200 Sobic003G320700 Sobic003G320700 Sobic001G517800--Sobic003G320700 Sobic001G517800--Sobic003G322700 Sobic002G146300 Sobic002G146300 Sobic001G517800--Sobic002G146300
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.