Gene annotation
Transcriptome id Sobic.010G205200.2,Sobic.010G205200.1
Synonym Sb10g025250, ATPAP26, PAP26
Functional annotation Ser/Thr protein phosphatase family protein, putative, expressed
UniProt A0A194YKI3
Pfam PF14008 PF16656 PF00149
Panther DB PTHR22953 PTHR22953:SF13
NCBI CDD KOG1378; Purple acid phosphatase
KEGG Orthology -
Gene Ontology GO:0016787; hydrolase activity


Orthologs (automatic annotation)
TAIR AT5G34850 : purple acid phosphatase 26
RAP-DB (Rice) LOC_Os06g43640.2 : Ser/Thr protein phosphatase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a051397
Brachypodium KQK16778
Barley HORVU7Hr1G115510.2 , HORVU7Hr1G115510.1
Wheat TraesCS7B02G434000 , TraesCS7A02G517900 , TraesCS7D02G507900 , TraesCS7B02G434100
Populus PNS92279 , PNS92278 , PNS92277 , PNS92276 , PNS92275 , PNS92274 , PNS92273 , PNS92286 , PNS92287 , PNS92284 , PNS92285 , PNS92282 , PNS92283 , PNS92280 , PNS92281


JBrowse

Open New Page


cDNA sequences
Sobic.010G205200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G428400 beta-galactosidase, putative, expressed K01190: beta-galactosidase
2 Sobic.001G069900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CBS domain containing membrane protein, putative, expressed K00088: IMPDH, IMP dehydrogenase
3 Sobic.006G028900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@1-aminocyclopropane-1-carboxylate oxidase homolog 2, putative, expressed -
4 Sobic.010G112300 aluminum-activated malate transporter, putative, expressed -
5 Sobic.001G015500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@inner membrane protein, putative, expressed K03217: yidC, spoIIIJ, OXA1, YidC/Oxa1 family membrane protein insertase
6 Sobic.001G301700 MYB family transcription factor, putative, expressed K09522: DnaJ homolog subfamily C member 2
7 Sobic.001G474500 mitochondrial carrier protein, putative, expressed -
8 Sobic.001G325200 Expressed in drought and oxidative stress(PubMedID : 29862293)@aldehyde oxidase, putative, expressed K00106: xanthine dehydrogenase/oxidase
9 Sobic.007G186200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@solute carrier family 35 member F1, putative, expressed K15287: solute carrier family 35, member F1/2
10 Sobic.003G398100 antigen peptide transporter-like 1, chloroplast precursor, putative, expressed -
11 Sobic.006G199000 pathogenesis-related Bet v I family protein, putative, expressed -
12 Sobic.008G153400 peptidase, putative, expressed K18151: ureidoglycolate amidohydrolase
13 Sobic.001G504900 pheophorbide a oxygenase, chloroplast precursor, putative, expressed K13071: PAO, pheophorbide a oxygenase
14 Sobic.007G068100 aconitate hydratase protein, putative, expressed K01681: ACO, aconitate hydratase
15 Sobic.009G057300 acyl-coenzyme A dehydrogenase, mitochondrial precursor, putative, expressed K00232: E1.3.3.6, ACOX1, acyl-CoA oxidase
16 Sobic.009G207600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@dnaJ domain containing protein, expressed -
17 Sobic.001G207400 katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed K18643: katanin p80 WD40 repeat-containing subunit B1
18 Sobic.006G157600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Thireodoxin family protein (Os)(PubMedID : 27208977)@thioredoxin, putative, expressed K03671: thioredoxin 1
19 Sobic.006G091700 12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
20 Sobic.001G438600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@dihydrodipicolinate reductase, putative, expressed K00215: 4-hydroxy-tetrahydrodipicolinate reductase


Gene co-expression network
sample Sobic010G205200 Sobic010G205200 Sobic003G428400 Sobic003G428400 Sobic010G205200--Sobic003G428400 Sobic001G069900 Sobic001G069900 Sobic010G205200--Sobic001G069900 Sobic006G028900 Sobic006G028900 Sobic010G205200--Sobic006G028900 Sobic010G112300 Sobic010G112300 Sobic010G205200--Sobic010G112300 Sobic001G015500 Sobic001G015500 Sobic010G205200--Sobic001G015500 Sobic001G301700 Sobic001G301700 Sobic010G205200--Sobic001G301700 Sobic001G474500 Sobic001G474500 Sobic010G205200--Sobic001G474500 Sobic001G325200 Sobic001G325200 Sobic010G205200--Sobic001G325200 Sobic007G186200 Sobic007G186200 Sobic010G205200--Sobic007G186200 Sobic007G068100 Sobic007G068100 Sobic003G428400--Sobic007G068100 Sobic003G428400--Sobic001G474500 Sobic003G428400--Sobic001G325200 Sobic003G428400--Sobic001G015500 Sobic003G428400--Sobic010G205200 Sobic003G428400--Sobic001G069900 Sobic009G057300 Sobic009G057300 Sobic003G428400--Sobic009G057300 Sobic001G438600 Sobic001G438600 Sobic003G428400--Sobic001G438600 Sobic003G428400--Sobic010G112300 Sobic001G069900--Sobic001G015500 Sobic006G181300 Sobic006G181300 Sobic001G069900--Sobic006G181300 Sobic003G087200 Sobic003G087200 Sobic001G069900--Sobic003G087200 Sobic006G091700 Sobic006G091700 Sobic001G069900--Sobic006G091700 Sobic009G114000 Sobic009G114000 Sobic001G069900--Sobic009G114000 Sobic001G150600 Sobic001G150600 Sobic001G069900--Sobic001G150600 Sobic005G178100 Sobic005G178100 Sobic001G069900--Sobic005G178100 Sobic009G034700 Sobic009G034700 Sobic001G069900--Sobic009G034700 Sobic001G069900--Sobic001G325200 Sobic006G028900--Sobic001G325200 Sobic006G028900--Sobic009G034700 Sobic004G124200 Sobic004G124200 Sobic006G028900--Sobic004G124200 Sobic006G028900--Sobic001G015500 Sobic008G153400 Sobic008G153400 Sobic006G028900--Sobic008G153400 Sobic006G028900--Sobic005G178100 Sobic006G028900--Sobic010G205200 Sobic002G266000 Sobic002G266000 Sobic006G028900--Sobic002G266000 Sobic004G101900 Sobic004G101900 Sobic006G028900--Sobic004G101900 Sobic002G270500 Sobic002G270500 Sobic010G112300--Sobic002G270500 Sobic001G207400 Sobic001G207400 Sobic010G112300--Sobic001G207400 Sobic010G112300--Sobic003G428400 Sobic004G113400 Sobic004G113400 Sobic010G112300--Sobic004G113400 Sobic002G430000 Sobic002G430000 Sobic010G112300--Sobic002G430000 Sobic010G112300--Sobic010G205200 Sobic008G167800 Sobic008G167800 Sobic010G112300--Sobic008G167800 Sobic004G355000 Sobic004G355000 Sobic010G112300--Sobic004G355000 Sobic009G094300 Sobic009G094300 Sobic010G112300--Sobic009G094300 Sobic001G015500--Sobic001G069900 Sobic001G015500--Sobic001G325200 Sobic001G015500--Sobic006G091700 Sobic001G015500--Sobic003G087200 Sobic001G015500--Sobic004G101900 Sobic001G015500--Sobic005G178100 Sobic001G015500--Sobic004G124200 Sobic001G015500--Sobic001G150600 Sobic001G015500--Sobic007G186200 Sobic001G301700--Sobic001G438600 Sobic001G301700--Sobic001G207400 Sobic001G301700--Sobic001G015500 Sobic001G301700--Sobic002G266000 Sobic008G093000 Sobic008G093000 Sobic001G301700--Sobic008G093000 Sobic001G301700--Sobic002G270500 Sobic001G301700--Sobic002G430000 Sobic002G111000 Sobic002G111000 Sobic001G301700--Sobic002G111000 Sobic001G301700--Sobic010G205200 Sobic001G474500--Sobic007G068100 Sobic001G474500--Sobic001G325200 Sobic001G474500--Sobic009G057300 Sobic004G060900 Sobic004G060900 Sobic001G474500--Sobic004G060900 Sobic003G388251 Sobic003G388251 Sobic001G474500--Sobic003G388251 Sobic004G321800 Sobic004G321800 Sobic001G474500--Sobic004G321800 Sobic001G474500--Sobic003G428400 Sobic001G130000 Sobic001G130000 Sobic001G474500--Sobic001G130000 Sobic001G474500--Sobic009G034700 Sobic001G325200--Sobic007G068100 Sobic009G226300 Sobic009G226300 Sobic001G325200--Sobic009G226300 Sobic003G148800 Sobic003G148800 Sobic001G325200--Sobic003G148800 Sobic001G325200--Sobic004G321800 Sobic001G325200--Sobic004G101900 Sobic002G304000 Sobic002G304000 Sobic001G325200--Sobic002G304000 Sobic009G054500 Sobic009G054500 Sobic001G325200--Sobic009G054500 Sobic001G325200--Sobic001G015500 Sobic003G355600 Sobic003G355600 Sobic001G325200--Sobic003G355600 Sobic007G186200--Sobic001G325200 Sobic007G186200--Sobic002G304000 Sobic007G186200--Sobic009G226300 Sobic007G186200--Sobic001G015500 Sobic007G186200--Sobic007G068100 Sobic007G186200--Sobic003G355600 Sobic007G186200--Sobic001G150600 Sobic007G186200--Sobic004G101900 Sobic007G186200--Sobic009G054500
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.