Gene annotation
Transcriptome id Sobic.001G496100.1
Synonym
Functional annotation -
UniProt A0A1B6QQD4
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G398100 antigen peptide transporter-like 1, chloroplast precursor, putative, expressed -
2 Sobic.009G207600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@dnaJ domain containing protein, expressed -
3 Sobic.009G011600 expressed protein -
4 Sobic.009G006400 auxin-induced protein 5NG4, putative, expressed -
5 Sobic.006G199000 pathogenesis-related Bet v I family protein, putative, expressed -
6 Sobic.004G225200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein nitrilase 4 NIT4 (Os)(PubMedID : 27208977)@nitrilase, putative, expressed K13035: beta-cyano-L-alanine hydratase/nitrilase
7 Sobic.002G266000 ankyrin repeat-containing protein, putative, expressed -
8 Sobic.005G149700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
9 Sobic.008G153400 peptidase, putative, expressed K18151: ureidoglycolate amidohydrolase
10 Sobic.001G504900 pheophorbide a oxygenase, chloroplast precursor, putative, expressed K13071: PAO, pheophorbide a oxygenase
11 Sobic.002G249300 auxin efflux carrier component, putative, expressed -
12 Sobic.004G034600 hydrolase, alpha/beta fold family domain containing protein, expressed -
13 Sobic.003G322700 expressed protein -
14 Sobic.001G282600 transporter family protein, putative, expressed -
15 Sobic.006G104600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.006G087700 T-complex protein 11, putative, expressed -
17 Sobic.002G338100 THYLAKOID FORMATION1, chloroplast precursor, putative, expressed -
18 Sobic.001G000700 glutathione S-transferase, N-terminal domain containing protein, expressed K00799: GST, glutathione S-transferase
19 Sobic.003G257100 YT521-B-like family domain containing protein, expressed -
20 Sobic.002G352800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@lactose permease-related, putative, expressed -


Gene co-expression network
sample Sobic001G496100 Sobic001G496100 Sobic003G398100 Sobic003G398100 Sobic001G496100--Sobic003G398100 Sobic009G207600 Sobic009G207600 Sobic001G496100--Sobic009G207600 Sobic009G011600 Sobic009G011600 Sobic001G496100--Sobic009G011600 Sobic009G006400 Sobic009G006400 Sobic001G496100--Sobic009G006400 Sobic006G199000 Sobic006G199000 Sobic001G496100--Sobic006G199000 Sobic004G225200 Sobic004G225200 Sobic001G496100--Sobic004G225200 Sobic002G266000 Sobic002G266000 Sobic001G496100--Sobic002G266000 Sobic005G149700 Sobic005G149700 Sobic001G496100--Sobic005G149700 Sobic008G153400 Sobic008G153400 Sobic001G496100--Sobic008G153400 Sobic003G398100--Sobic006G199000 Sobic003G398100--Sobic008G153400 Sobic003G398100--Sobic009G207600 Sobic001G504900 Sobic001G504900 Sobic003G398100--Sobic001G504900 Sobic003G257100 Sobic003G257100 Sobic003G398100--Sobic003G257100 Sobic003G398100--Sobic001G496100 Sobic003G355600 Sobic003G355600 Sobic003G398100--Sobic003G355600 Sobic003G322700 Sobic003G322700 Sobic003G398100--Sobic003G322700 Sobic001G150600 Sobic001G150600 Sobic003G398100--Sobic001G150600 Sobic009G207600--Sobic001G504900 Sobic009G207600--Sobic003G398100 Sobic002G338100 Sobic002G338100 Sobic009G207600--Sobic002G338100 Sobic008G079300 Sobic008G079300 Sobic009G207600--Sobic008G079300 Sobic001G474500 Sobic001G474500 Sobic009G207600--Sobic001G474500 Sobic009G207600--Sobic008G153400 Sobic009G207600--Sobic001G496100 Sobic006G091700 Sobic006G091700 Sobic009G207600--Sobic006G091700 Sobic003G087200 Sobic003G087200 Sobic009G207600--Sobic003G087200 Sobic004G034600 Sobic004G034600 Sobic009G011600--Sobic004G034600 Sobic001G517800 Sobic001G517800 Sobic009G011600--Sobic001G517800 Sobic009G011600--Sobic001G496100 Sobic009G011600--Sobic005G149700 Sobic010G020800 Sobic010G020800 Sobic009G011600--Sobic010G020800 Sobic007G169300 Sobic007G169300 Sobic009G011600--Sobic007G169300 Sobic002G249300 Sobic002G249300 Sobic009G011600--Sobic002G249300 Sobic005G149200 Sobic005G149200 Sobic009G011600--Sobic005G149200 Sobic010G043100 Sobic010G043100 Sobic009G011600--Sobic010G043100 Sobic009G006400--Sobic001G496100 Sobic009G006400--Sobic009G207600 Sobic009G006400--Sobic003G322700 Sobic003G010600 Sobic003G010600 Sobic009G006400--Sobic003G010600 Sobic009G006400--Sobic001G474500 Sobic009G006400--Sobic002G266000 Sobic001G176501 Sobic001G176501 Sobic009G006400--Sobic001G176501 Sobic004G266400 Sobic004G266400 Sobic009G006400--Sobic004G266400 Sobic006G087700 Sobic006G087700 Sobic009G006400--Sobic006G087700 Sobic006G199000--Sobic008G153400 Sobic006G199000--Sobic003G398100 Sobic006G199000--Sobic003G257100 Sobic006G199000--Sobic003G355600 Sobic001G325200 Sobic001G325200 Sobic006G199000--Sobic001G325200 Sobic006G199000--Sobic001G150600 Sobic001G015500 Sobic001G015500 Sobic006G199000--Sobic001G015500 Sobic001G282600 Sobic001G282600 Sobic006G199000--Sobic001G282600 Sobic006G199000--Sobic006G091700 Sobic004G225100 Sobic004G225100 Sobic004G225200--Sobic004G225100 Sobic004G225200--Sobic001G282600 Sobic004G225200--Sobic002G266000 Sobic004G225200--Sobic006G199000 Sobic004G225200--Sobic003G398100 Sobic006G104600 Sobic006G104600 Sobic004G225200--Sobic006G104600 Sobic004G071200 Sobic004G071200 Sobic004G225200--Sobic004G071200 Sobic004G225200--Sobic003G322700 Sobic005G178100 Sobic005G178100 Sobic004G225200--Sobic005G178100 Sobic002G266000--Sobic003G322700 Sobic002G266000--Sobic001G282600 Sobic002G266000--Sobic006G104600 Sobic002G249200 Sobic002G249200 Sobic002G266000--Sobic002G249200 Sobic004G261900 Sobic004G261900 Sobic002G266000--Sobic004G261900 Sobic007G004500 Sobic007G004500 Sobic002G266000--Sobic007G004500 Sobic002G266000--Sobic004G034600 Sobic002G266000--Sobic005G149700 Sobic002G266000--Sobic004G225200 Sobic005G149700--Sobic004G034600 Sobic005G149700--Sobic001G504900 Sobic005G149700--Sobic002G266000 Sobic002G128200 Sobic002G128200 Sobic005G149700--Sobic002G128200 Sobic005G149700--Sobic006G104600 Sobic005G149700--Sobic009G011600 Sobic005G149700--Sobic009G207600 Sobic003G174301 Sobic003G174301 Sobic005G149700--Sobic003G174301 Sobic005G149700--Sobic003G398100 Sobic008G153400--Sobic001G150600 Sobic008G153400--Sobic006G199000 Sobic006G030700 Sobic006G030700 Sobic008G153400--Sobic006G030700 Sobic008G153400--Sobic001G325200 Sobic008G153400--Sobic003G398100 Sobic008G153400--Sobic003G257100 Sobic008G153400--Sobic003G087200 Sobic008G153400--Sobic006G091700 Sobic009G226300 Sobic009G226300 Sobic008G153400--Sobic009G226300
Octagon: transcription factors


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