Gene annotation
Transcriptome id Sobic.001G409300.1
Synonym Sb01g038660
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
phosphatidylinositol transfer protein alpha isoform, putative, expressed
UniProt A0A1Z5SA28
Pfam PF02121
Panther DB PTHR10658
NCBI CDD KOG3668; Phosphatidylinositol transfer protein
KEGG Orthology -
Gene Ontology GO:0006810; transport GO:0005622intracellular


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os03g17800.1 : phosphatidylinositol transfer protein alpha isoform, putative, expressed
MaizeGDB (Corn) Zm00025a001948
Brachypodium PNT77603
Barley HORVU4Hr1G056950.3 , HORVU4Hr1G056950.2 , HORVU4Hr1G056950.1 , HORVU4Hr1G056950.7 , HORVU4Hr1G056950.6 , HORVU4Hr1G056950.5 , HORVU4Hr1G056950.4 , HORVU4Hr1G056950.9 , HORVU4Hr1G056950.8 , HORVU4Hr1G056950.11 , HORVU4Hr1G056950.10
Wheat TraesCS4D02G197500 , TraesCS4A02G107200 , TraesCS4B02G197200 , TraesCS4A02G107200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G059100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@amino acid transporter, putative, expressed -
2 Sobic.004G211900 "Significantly enhanced the expression levels by drought stress, up-regulated by silicon application under drought stress "(PubMedID : 24813726)@S-adenosyl-l-methionine decarboxylase leader peptide, putative, expressed K01611: speD, S-adenosylmethionine decarboxylase
3 Sobic.003G242000 AMP-binding enzyme, putative, expressed K01897: ACSL, long-chain acyl-CoA synthetase
4 Sobic.001G217400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF1336 domain containing protein, expressed -
5 Sobic.010G272200 leucine zipper protein-like, putative, expressed -
6 Sobic.003G051600 universal stress protein domain containing protein, putative, expressed -
7 Sobic.003G269800 phosphatidylinositol transfer, putative, expressed -
8 Sobic.003G397500 expressed protein -
9 Sobic.009G136100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@auxin-induced protein 5NG4, putative, expressed -
10 Sobic.001G092000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.002G187700 expressed protein -
12 Sobic.001G305500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.009G190700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@jacalin-like lectin domain containing protein, expressed -
14 Sobic.007G210500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ABC transporter, ATP-binding protein, putative, expressed -
15 Sobic.010G227300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
16 Sobic.001G235500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
17 Sobic.001G350900 OsFBO14 - F-box and other domain containing protein, expressed -
18 Sobic.001G350700 Positive regulator of ABA(PubMedID : 30367619)@CAMK_CAMK_like.19 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K14498: serine/threonine-protein kinase SRK2
19 Sobic.001G481900 SAC domain containing protein, putative, expressed -
20 Sobic.003G036600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@myb-related transcription activator, putative, expressed -


Gene co-expression network
sample Sobic001G409300 Sobic001G409300 Sobic008G059100 Sobic008G059100 Sobic001G409300--Sobic008G059100 Sobic004G211900 Sobic004G211900 Sobic001G409300--Sobic004G211900 Sobic003G242000 Sobic003G242000 Sobic001G409300--Sobic003G242000 Sobic001G217400 Sobic001G217400 Sobic001G409300--Sobic001G217400 Sobic010G272200 Sobic010G272200 Sobic001G409300--Sobic010G272200 Sobic003G051600 Sobic003G051600 Sobic001G409300--Sobic003G051600 Sobic003G269800 Sobic003G269800 Sobic001G409300--Sobic003G269800 Sobic003G397500 Sobic003G397500 Sobic001G409300--Sobic003G397500 Sobic009G136100 Sobic009G136100 Sobic001G409300--Sobic009G136100 Sobic001G488700 Sobic001G488700 Sobic008G059100--Sobic001G488700 Sobic002G187700 Sobic002G187700 Sobic008G059100--Sobic002G187700 Sobic008G059100--Sobic001G409300 Sobic001G481900 Sobic001G481900 Sobic008G059100--Sobic001G481900 Sobic004G233200 Sobic004G233200 Sobic008G059100--Sobic004G233200 Sobic003G302800 Sobic003G302800 Sobic008G059100--Sobic003G302800 Sobic009G190700 Sobic009G190700 Sobic008G059100--Sobic009G190700 Sobic007G164000 Sobic007G164000 Sobic008G059100--Sobic007G164000 Sobic010G262500 Sobic010G262500 Sobic008G059100--Sobic010G262500 Sobic004G211866 Sobic004G211866 Sobic004G211900--Sobic004G211866 Sobic001G350900 Sobic001G350900 Sobic004G211900--Sobic001G350900 Sobic004G211900--Sobic001G409300 Sobic004G211900--Sobic001G217400 Sobic001G062300 Sobic001G062300 Sobic004G211900--Sobic001G062300 Sobic007G210500 Sobic007G210500 Sobic004G211900--Sobic007G210500 Sobic004G211900--Sobic003G269800 Sobic004G211900--Sobic008G059100 Sobic006G275100 Sobic006G275100 Sobic004G211900--Sobic006G275100 Sobic003G198800 Sobic003G198800 Sobic003G242000--Sobic003G198800 Sobic002G262300 Sobic002G262300 Sobic003G242000--Sobic002G262300 Sobic003G115900 Sobic003G115900 Sobic003G242000--Sobic003G115900 Sobic002G383600 Sobic002G383600 Sobic003G242000--Sobic002G383600 Sobic001G064200 Sobic001G064200 Sobic003G242000--Sobic001G064200 Sobic008G152600 Sobic008G152600 Sobic003G242000--Sobic008G152600 Sobic003G242000--Sobic001G409300 Sobic003G242000--Sobic008G059100 Sobic006G002300 Sobic006G002300 Sobic003G242000--Sobic006G002300 Sobic010G072400 Sobic010G072400 Sobic001G217400--Sobic010G072400 Sobic001G217400--Sobic001G350900 Sobic001G350700 Sobic001G350700 Sobic001G217400--Sobic001G350700 Sobic001G217400--Sobic004G211900 Sobic001G217400--Sobic003G269800 Sobic003G320700 Sobic003G320700 Sobic001G217400--Sobic003G320700 Sobic001G217400--Sobic007G210500 Sobic003G101850 Sobic003G101850 Sobic001G217400--Sobic003G101850 Sobic006G271200 Sobic006G271200 Sobic001G217400--Sobic006G271200 Sobic010G272200--Sobic001G409300 Sobic010G272200--Sobic008G059100 Sobic003G036600 Sobic003G036600 Sobic010G272200--Sobic003G036600 Sobic006G150400 Sobic006G150400 Sobic010G272200--Sobic006G150400 Sobic010G272200--Sobic009G190700 Sobic010G272200--Sobic003G397500 Sobic010G260300 Sobic010G260300 Sobic010G272200--Sobic010G260300 Sobic001G426800 Sobic001G426800 Sobic010G272200--Sobic001G426800 Sobic007G131700 Sobic007G131700 Sobic010G272200--Sobic007G131700 Sobic003G051600--Sobic007G210500 Sobic002G266000 Sobic002G266000 Sobic003G051600--Sobic002G266000 Sobic001G282600 Sobic001G282600 Sobic003G051600--Sobic001G282600 Sobic006G214200 Sobic006G214200 Sobic003G051600--Sobic006G214200 Sobic006G064600 Sobic006G064600 Sobic003G051600--Sobic006G064600 Sobic003G051600--Sobic003G320700 Sobic006G233500 Sobic006G233500 Sobic003G051600--Sobic006G233500 Sobic001G462500 Sobic001G462500 Sobic003G051600--Sobic001G462500 Sobic003G051600--Sobic001G409300 Sobic009G118600 Sobic009G118600 Sobic003G269800--Sobic009G118600 Sobic003G269800--Sobic001G217400 Sobic004G124500 Sobic004G124500 Sobic003G269800--Sobic004G124500 Sobic003G269800--Sobic001G409300 Sobic007G056600 Sobic007G056600 Sobic003G269800--Sobic007G056600 Sobic003G126300 Sobic003G126300 Sobic003G269800--Sobic003G126300 Sobic001G399800 Sobic001G399800 Sobic003G269800--Sobic001G399800 Sobic003G269800--Sobic004G211900 Sobic003G281900 Sobic003G281900 Sobic003G269800--Sobic003G281900 Sobic003G252400 Sobic003G252400 Sobic003G397500--Sobic003G252400 Sobic008G075600 Sobic008G075600 Sobic003G397500--Sobic008G075600 Sobic004G211301 Sobic004G211301 Sobic003G397500--Sobic004G211301 Sobic002G331450 Sobic002G331450 Sobic003G397500--Sobic002G331450 Sobic010G026500 Sobic010G026500 Sobic003G397500--Sobic010G026500 Sobic002G110200 Sobic002G110200 Sobic003G397500--Sobic002G110200 Sobic002G229600 Sobic002G229600 Sobic003G397500--Sobic002G229600 Sobic008G031300 Sobic008G031300 Sobic003G397500--Sobic008G031300 Sobic010G085400 Sobic010G085400 Sobic003G397500--Sobic010G085400 Sobic001G235500 Sobic001G235500 Sobic009G136100--Sobic001G235500 Sobic009G136100--Sobic009G118600 Sobic004G236550 Sobic004G236550 Sobic009G136100--Sobic004G236550 Sobic009G079300 Sobic009G079300 Sobic009G136100--Sobic009G079300 Sobic009G136100--Sobic003G252400 Sobic009G200300 Sobic009G200300 Sobic009G136100--Sobic009G200300 Sobic001G005700 Sobic001G005700 Sobic009G136100--Sobic001G005700 Sobic009G136100--Sobic004G211301 Sobic006G115300 Sobic006G115300 Sobic009G136100--Sobic006G115300
Octagon: transcription factors


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