Gene annotation
Transcriptome id Sobic.001G350900.2,Sobic.001G350900.1
Synonym Sb01g033580
Functional annotation OsFBO14 - F-box and other domain containing protein, expressed
UniProt A0A1Z5S9I8 , A0A1Z5S9S8
Pfam PF01636 PF13621 PF01636 PF12937 PF13621
Panther DB PTHR12480 PTHR12480:SF5
NCBI CDD KOG2130; Phosphatidylserine-specific receptor PtdSerR, contains JmjC domain
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G78280 : transferases, transferring glycosyl groups
RAP-DB (Rice) LOC_Os03g27250.1 : OsFBO14 - F-box and other domain containing protein, expressed
MaizeGDB (Corn) Zm00025a002726
Brachypodium KQK21437 , PNT77300
Barley HORVU2Hr1G085360.6 , HORVU2Hr1G085360.7 , HORVU2Hr1G085360.4 , HORVU2Hr1G085360.5 , HORVU2Hr1G085360.2 , HORVU2Hr1G085360.3 , HORVU2Hr1G085360.1 , HORVU2Hr1G085360.8 , HORVU2Hr1G085360.9 , HORVU5Hr1G051240.7 , HORVU5Hr1G051240.6 , HORVU5Hr1G051240.5 , HORVU5Hr1G051240.4 , HORVU5Hr1G051240.3 , HORVU5Hr1G051240.2 , HORVU5Hr1G051240.1 , HORVU5Hr1G051240.9 , HORVU5Hr1G051240.19 , HORVU5Hr1G051240.18 , HORVU5Hr1G051240.17 , HORVU5Hr1G051240.16 , HORVU5Hr1G051240.15 , HORVU5Hr1G051240.14 , HORVU5Hr1G051240.13 , HORVU5Hr1G051240.12 , HORVU5Hr1G051240.11 , HORVU2Hr1G085360.18 , HORVU2Hr1G085360.19 , HORVU2Hr1G085360.14 , HORVU2Hr1G085360.15 , HORVU2Hr1G085360.16 , HORVU2Hr1G085360.17 , HORVU2Hr1G085360.10 , HORVU2Hr1G085360.11 , HORVU2Hr1G085360.12 , HORVU2Hr1G085360.13 , HORVU2Hr1G085360.21 , HORVU2Hr1G085360.20 , HORVU2Hr1G085360.23 , HORVU2Hr1G085360.22 , HORVU2Hr1G085360.25 , HORVU2Hr1G085360.24 , HORVU2Hr1G085360.27 , HORVU2Hr1G085360.26 , HORVU2Hr1G085360.29 , HORVU2Hr1G085360.28 , HORVU5Hr1G051240.22 , HORVU5Hr1G051240.20 , HORVU5Hr1G051240.8 , HORVU2Hr1G071220.1
Wheat TraesCS5B02G163600 , TraesCS2B02G369400 , TraesCS2B02G369400 , TraesCS2B02G369400 , TraesCS2A02G351300 , TraesCS5A02G166200 , TraesCS5A02G166200 , TraesCS5D02G170800 , TraesCS5D02G170800 , TraesCS5D02G170800 , TraesCS2D02G349100 , TraesCS2D02G349100
Populus -


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cDNA sequences
Sobic.001G350900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G211900 "Significantly enhanced the expression levels by drought stress, up-regulated by silicon application under drought stress "(PubMedID : 24813726)@S-adenosyl-l-methionine decarboxylase leader peptide, putative, expressed K01611: speD, S-adenosylmethionine decarboxylase
2 Sobic.001G217400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF1336 domain containing protein, expressed -
3 Sobic.004G211866 - -
4 Sobic.006G033200 Sec1 family transport protein, putative, expressed K15292: STXBP1, syntaxin-binding protein 1
5 Sobic.008G047400 OsFBT14 - F-box and tubby domain containing protein, expressed -
6 Sobic.002G217400 HD domain containing protein, putative, expressed -
7 Sobic.001G103200 DNA binding protein, putative, expressed -
8 Sobic.001G541100 signal recognition particle receptor, putative, expressed K13431: signal recognition particle receptor subunit alpha
9 Sobic.001G414500 ankyrin repeat-containing protein, putative, expressed -
10 Sobic.003G228100 cytochrome P450 72A1, putative, expressed -
11 Sobic.001G409300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@phosphatidylinositol transfer protein alpha isoform, putative, expressed -
12 Sobic.010G278200 expressed protein -
13 Sobic.004G228800 LMBR1 integral membrane protein, putative, expressed -
14 Sobic.003G126300 OsRhmbd2 - Putative Rhomboid homologue, expressed -
15 Sobic.003G309200 expressed protein K12617: PATL1, DNA topoisomerase 2-associated protein PAT1
16 Sobic.001G516100 protein kinase family protein, putative, expressed K14500: BR-signaling kinase
17 Sobic.001G350700 Positive regulator of ABA(PubMedID : 30367619)@CAMK_CAMK_like.19 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K14498: serine/threonine-protein kinase SRK2
18 Sobic.006G271200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@cysteine protease ATG4, putative, expressed K08342: cysteine protease ATG4
19 Sobic.003G105101 - K13628: iron-sulfur cluster assembly protein
20 Sobic.004G271700 ADP-ribosylation factor, putative, expressed K07977: Arf/Sar family, other


Gene co-expression network
sample Sobic001G350900 Sobic001G350900 Sobic004G211900 Sobic004G211900 Sobic001G350900--Sobic004G211900 Sobic001G217400 Sobic001G217400 Sobic001G350900--Sobic001G217400 Sobic004G211866 Sobic004G211866 Sobic001G350900--Sobic004G211866 Sobic006G033200 Sobic006G033200 Sobic001G350900--Sobic006G033200 Sobic008G047400 Sobic008G047400 Sobic001G350900--Sobic008G047400 Sobic002G217400 Sobic002G217400 Sobic001G350900--Sobic002G217400 Sobic001G103200 Sobic001G103200 Sobic001G350900--Sobic001G103200 Sobic001G541100 Sobic001G541100 Sobic001G350900--Sobic001G541100 Sobic001G414500 Sobic001G414500 Sobic001G350900--Sobic001G414500 Sobic004G211900--Sobic004G211866 Sobic004G211900--Sobic001G350900 Sobic001G409300 Sobic001G409300 Sobic004G211900--Sobic001G409300 Sobic004G211900--Sobic001G217400 Sobic001G062300 Sobic001G062300 Sobic004G211900--Sobic001G062300 Sobic007G210500 Sobic007G210500 Sobic004G211900--Sobic007G210500 Sobic003G269800 Sobic003G269800 Sobic004G211900--Sobic003G269800 Sobic008G059100 Sobic008G059100 Sobic004G211900--Sobic008G059100 Sobic006G275100 Sobic006G275100 Sobic004G211900--Sobic006G275100 Sobic010G072400 Sobic010G072400 Sobic001G217400--Sobic010G072400 Sobic001G217400--Sobic001G350900 Sobic001G350700 Sobic001G350700 Sobic001G217400--Sobic001G350700 Sobic001G217400--Sobic004G211900 Sobic001G217400--Sobic003G269800 Sobic003G320700 Sobic003G320700 Sobic001G217400--Sobic003G320700 Sobic001G217400--Sobic007G210500 Sobic003G101850 Sobic003G101850 Sobic001G217400--Sobic003G101850 Sobic006G271200 Sobic006G271200 Sobic001G217400--Sobic006G271200 Sobic004G211866--Sobic004G211900 Sobic004G211866--Sobic001G062300 Sobic004G211866--Sobic001G350900 Sobic004G211866--Sobic001G217400 Sobic009G080400 Sobic009G080400 Sobic004G211866--Sobic009G080400 Sobic004G211866--Sobic007G210500 Sobic010G177400 Sobic010G177400 Sobic004G211866--Sobic010G177400 Sobic002G262300 Sobic002G262300 Sobic004G211866--Sobic002G262300 Sobic004G189200 Sobic004G189200 Sobic004G211866--Sobic004G189200 Sobic010G130000 Sobic010G130000 Sobic006G033200--Sobic010G130000 Sobic008G124900 Sobic008G124900 Sobic006G033200--Sobic008G124900 Sobic010G278200 Sobic010G278200 Sobic006G033200--Sobic010G278200 Sobic009G138100 Sobic009G138100 Sobic006G033200--Sobic009G138100 Sobic007G093800 Sobic007G093800 Sobic006G033200--Sobic007G093800 Sobic004G202500 Sobic004G202500 Sobic006G033200--Sobic004G202500 Sobic007G179800 Sobic007G179800 Sobic006G033200--Sobic007G179800 Sobic003G302900 Sobic003G302900 Sobic006G033200--Sobic003G302900 Sobic003G312200 Sobic003G312200 Sobic006G033200--Sobic003G312200 Sobic008G047400--Sobic008G124900 Sobic008G047400--Sobic010G278200 Sobic008G047400--Sobic006G033200 Sobic008G047400--Sobic004G202500 Sobic008G047400--Sobic003G302900 Sobic010G074300 Sobic010G074300 Sobic008G047400--Sobic010G074300 Sobic004G255700 Sobic004G255700 Sobic008G047400--Sobic004G255700 Sobic010G147100 Sobic010G147100 Sobic008G047400--Sobic010G147100 Sobic003G309200 Sobic003G309200 Sobic008G047400--Sobic003G309200 Sobic002G217400--Sobic001G414500 Sobic004G102400 Sobic004G102400 Sobic002G217400--Sobic004G102400 Sobic003G352600 Sobic003G352600 Sobic002G217400--Sobic003G352600 Sobic005G203800 Sobic005G203800 Sobic002G217400--Sobic005G203800 Sobic002G217400--Sobic001G350900 Sobic003G098000 Sobic003G098000 Sobic002G217400--Sobic003G098000 Sobic002G217400--Sobic009G138100 Sobic002G375300 Sobic002G375300 Sobic002G217400--Sobic002G375300 Sobic010G130200 Sobic010G130200 Sobic002G217400--Sobic010G130200 Sobic001G516100 Sobic001G516100 Sobic001G103200--Sobic001G516100 Sobic001G358300 Sobic001G358300 Sobic001G103200--Sobic001G358300 Sobic004G271700 Sobic004G271700 Sobic001G103200--Sobic004G271700 Sobic001G510700 Sobic001G510700 Sobic001G103200--Sobic001G510700 Sobic009G135100 Sobic009G135100 Sobic001G103200--Sobic009G135100 Sobic009G219900 Sobic009G219900 Sobic001G103200--Sobic009G219900 Sobic004G350300 Sobic004G350300 Sobic001G103200--Sobic004G350300 Sobic001G103200--Sobic001G350900 Sobic003G002400 Sobic003G002400 Sobic001G103200--Sobic003G002400 Sobic009G219000 Sobic009G219000 Sobic001G541100--Sobic009G219000 Sobic001G323000 Sobic001G323000 Sobic001G541100--Sobic001G323000 Sobic001G541100--Sobic009G219900 Sobic001G541100--Sobic009G138100 Sobic006G209400 Sobic006G209400 Sobic001G541100--Sobic006G209400 Sobic001G395400 Sobic001G395400 Sobic001G541100--Sobic001G395400 Sobic001G541100--Sobic010G130000 Sobic001G105500 Sobic001G105500 Sobic001G541100--Sobic001G105500 Sobic002G134600 Sobic002G134600 Sobic001G541100--Sobic002G134600 Sobic008G089900 Sobic008G089900 Sobic001G414500--Sobic008G089900 Sobic001G414500--Sobic009G219900 Sobic006G261300 Sobic006G261300 Sobic001G414500--Sobic006G261300 Sobic006G092400 Sobic006G092400 Sobic001G414500--Sobic006G092400 Sobic001G414500--Sobic002G217400 Sobic003G077900 Sobic003G077900 Sobic001G414500--Sobic003G077900 Sobic002G290400 Sobic002G290400 Sobic001G414500--Sobic002G290400 Sobic006G090000 Sobic006G090000 Sobic001G414500--Sobic006G090000 Sobic001G503300 Sobic001G503300 Sobic001G414500--Sobic001G503300
Octagon: transcription factors


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