Gene annotation
Transcriptome id Sobic.001G103200.1
Synonym Sb01g009220
Functional annotation DNA binding protein, putative, expressed
UniProt C5WLZ0
Pfam PF02485
Panther DB PTHR31042 PTHR31042:SF8
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0008375acetylglucosaminyltransferase activity


Orthologs (automatic annotation)
TAIR AT5G11730 : Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
RAP-DB (Rice) LOC_Os03g52120.1 : DNA binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a008016 , Zm00025a008014 , Zm00025a008015
Brachypodium KQK13377
Barley HORVU4Hr1G010270.3 , HORVU4Hr1G010270.8 , HORVU4Hr1G010270.4 , HORVU4Hr1G010270.5 , HORVU4Hr1G010270.6 , HORVU4Hr1G010270.7 , HORVU4Hr1G010270.1 , HORVU4Hr1G010270.2
Wheat TraesCS4B02G062000 , TraesCS4D02G061000 , TraesCS4A02G253400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G516100 protein kinase family protein, putative, expressed K14500: BR-signaling kinase
2 Sobic.001G358300 SNARE associated Golgi protein, putative, expressed -
3 Sobic.004G271700 ADP-ribosylation factor, putative, expressed K07977: Arf/Sar family, other
4 Sobic.001G510700 expressed protein -
5 Sobic.009G135100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lipase, putative, expressed -
6 Sobic.009G219900 peptidyl-tRNA hydrolase, mitochondrial precursor protein, putative, expressed K01056: PTH1, pth, peptidyl-tRNA hydrolase, PTH1 family
7 Sobic.004G350300 No apical meristem protein, putative, expressed -
8 Sobic.001G350900 OsFBO14 - F-box and other domain containing protein, expressed -
9 Sobic.003G002400 dnaJ domain containing protein, expressed K09510: DnaJ homolog subfamily B member 4
10 Sobic.010G094600 zinc finger, C3HC4 type, domain containing protein, expressed -
11 Sobic.002G083266 - K00326: cytochrome-b5 reductase
12 Sobic.001G415000 expressed protein -
13 Sobic.007G006600 expressed protein -
14 Sobic.002G293300 octicosapeptide/Phox/Bem1p, putative, expressed -
15 Sobic.001G311100 ubiquitin family protein, putative, expressed K04523: UBQLN, ubiquilin
16 Sobic.006G033200 Sec1 family transport protein, putative, expressed K15292: STXBP1, syntaxin-binding protein 1
17 Sobic.001G185500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
18 Sobic.002G330300 chitin-inducible gibberellin-responsive protein, putative, expressed -
19 Sobic.009G079300 receptor protein kinase-like, putative, expressed -
20 Sobic.008G115500 syntaxin, putative, expressed K08486: syntaxin 1B/2/3


Gene co-expression network
sample Sobic001G103200 Sobic001G103200 Sobic001G516100 Sobic001G516100 Sobic001G103200--Sobic001G516100 Sobic001G358300 Sobic001G358300 Sobic001G103200--Sobic001G358300 Sobic004G271700 Sobic004G271700 Sobic001G103200--Sobic004G271700 Sobic001G510700 Sobic001G510700 Sobic001G103200--Sobic001G510700 Sobic009G135100 Sobic009G135100 Sobic001G103200--Sobic009G135100 Sobic009G219900 Sobic009G219900 Sobic001G103200--Sobic009G219900 Sobic004G350300 Sobic004G350300 Sobic001G103200--Sobic004G350300 Sobic001G350900 Sobic001G350900 Sobic001G103200--Sobic001G350900 Sobic003G002400 Sobic003G002400 Sobic001G103200--Sobic003G002400 Sobic004G031600 Sobic004G031600 Sobic001G516100--Sobic004G031600 Sobic001G516100--Sobic001G103200 Sobic003G367300 Sobic003G367300 Sobic001G516100--Sobic003G367300 Sobic001G516100--Sobic004G271700 Sobic002G330300 Sobic002G330300 Sobic001G516100--Sobic002G330300 Sobic002G293300 Sobic002G293300 Sobic001G516100--Sobic002G293300 Sobic001G541100 Sobic001G541100 Sobic001G516100--Sobic001G541100 Sobic001G516100--Sobic003G002400 Sobic004G274400 Sobic004G274400 Sobic001G516100--Sobic004G274400 Sobic001G358300--Sobic001G103200 Sobic001G415000 Sobic001G415000 Sobic001G358300--Sobic001G415000 Sobic004G059900 Sobic004G059900 Sobic001G358300--Sobic004G059900 Sobic001G358300--Sobic003G002400 Sobic001G358300--Sobic004G271700 Sobic001G358300--Sobic004G350300 Sobic004G058200 Sobic004G058200 Sobic001G358300--Sobic004G058200 Sobic001G434900 Sobic001G434900 Sobic001G358300--Sobic001G434900 Sobic003G238000 Sobic003G238000 Sobic001G358300--Sobic003G238000 Sobic008G115500 Sobic008G115500 Sobic004G271700--Sobic008G115500 Sobic004G271700--Sobic001G516100 Sobic004G271700--Sobic003G002400 Sobic004G271700--Sobic009G219900 Sobic001G158500 Sobic001G158500 Sobic004G271700--Sobic001G158500 Sobic004G271700--Sobic001G103200 Sobic010G188100 Sobic010G188100 Sobic004G271700--Sobic010G188100 Sobic001G220400 Sobic001G220400 Sobic004G271700--Sobic001G220400 Sobic004G271700--Sobic002G293300 Sobic010G246000 Sobic010G246000 Sobic001G510700--Sobic010G246000 Sobic001G510700--Sobic001G103200 Sobic003G019200 Sobic003G019200 Sobic001G510700--Sobic003G019200 Sobic010G228000 Sobic010G228000 Sobic001G510700--Sobic010G228000 Sobic009G220200 Sobic009G220200 Sobic001G510700--Sobic009G220200 Sobic002G083266 Sobic002G083266 Sobic001G510700--Sobic002G083266 Sobic001G510700--Sobic002G330300 Sobic001G203200 Sobic001G203200 Sobic001G510700--Sobic001G203200 Sobic001G482100 Sobic001G482100 Sobic001G510700--Sobic001G482100 Sobic009G135100--Sobic001G103200 Sobic007G125900 Sobic007G125900 Sobic009G135100--Sobic007G125900 Sobic004G236550 Sobic004G236550 Sobic009G135100--Sobic004G236550 Sobic005G035300 Sobic005G035300 Sobic009G135100--Sobic005G035300 Sobic010G016400 Sobic010G016400 Sobic009G135100--Sobic010G016400 Sobic001G074200 Sobic001G074200 Sobic009G135100--Sobic001G074200 Sobic009G079300 Sobic009G079300 Sobic009G135100--Sobic009G079300 Sobic009G200300 Sobic009G200300 Sobic009G135100--Sobic009G200300 Sobic001G085900 Sobic001G085900 Sobic009G135100--Sobic001G085900 Sobic009G219900--Sobic010G188100 Sobic009G219900--Sobic001G220400 Sobic003G077900 Sobic003G077900 Sobic009G219900--Sobic003G077900 Sobic009G219900--Sobic001G541100 Sobic001G328200 Sobic001G328200 Sobic009G219900--Sobic001G328200 Sobic006G225600 Sobic006G225600 Sobic009G219900--Sobic006G225600 Sobic010G101500 Sobic010G101500 Sobic009G219900--Sobic010G101500 Sobic001G414500 Sobic001G414500 Sobic009G219900--Sobic001G414500 Sobic002G431600 Sobic002G431600 Sobic009G219900--Sobic002G431600 Sobic004G350300--Sobic003G002400 Sobic004G350300--Sobic001G434900 Sobic003G248600 Sobic003G248600 Sobic004G350300--Sobic003G248600 Sobic004G321900 Sobic004G321900 Sobic004G350300--Sobic004G321900 Sobic004G183400 Sobic004G183400 Sobic004G350300--Sobic004G183400 Sobic001G122500 Sobic001G122500 Sobic004G350300--Sobic001G122500 Sobic002G045300 Sobic002G045300 Sobic004G350300--Sobic002G045300 Sobic001G433400 Sobic001G433400 Sobic004G350300--Sobic001G433400 Sobic004G350300--Sobic004G274400 Sobic004G211900 Sobic004G211900 Sobic001G350900--Sobic004G211900 Sobic001G217400 Sobic001G217400 Sobic001G350900--Sobic001G217400 Sobic004G211866 Sobic004G211866 Sobic001G350900--Sobic004G211866 Sobic006G033200 Sobic006G033200 Sobic001G350900--Sobic006G033200 Sobic008G047400 Sobic008G047400 Sobic001G350900--Sobic008G047400 Sobic002G217400 Sobic002G217400 Sobic001G350900--Sobic002G217400 Sobic001G350900--Sobic001G103200 Sobic001G350900--Sobic001G541100 Sobic001G350900--Sobic001G414500 Sobic003G002400--Sobic004G350300 Sobic003G002400--Sobic004G274400 Sobic003G002400--Sobic001G434900 Sobic003G002400--Sobic002G045300 Sobic003G220600 Sobic003G220600 Sobic003G002400--Sobic003G220600 Sobic003G002400--Sobic004G271700 Sobic003G002400--Sobic001G122500 Sobic003G002400--Sobic006G033200 Sobic003G002400--Sobic010G101500
Octagon: transcription factors


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