Gene annotation
Transcriptome id Sobic.001G358300.2
Synonym Sb01g034220
Functional annotation SNARE associated Golgi protein, putative, expressed
UniProt C5WYN5
Pfam PF09335
Panther DB PTHR12677 PTHR12677:SF25
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G02370 : SNARE associated Golgi protein family
RAP-DB (Rice) LOC_Os03g25750.1 : SNARE associated Golgi protein, putative, expressed
MaizeGDB (Corn) Zm00025a052292
Brachypodium KQK21526
Barley HORVU6Hr1G083810.2 , HORVU6Hr1G083810.3 , HORVU6Hr1G083810.1 , HORVU6Hr1G083810.6 , HORVU6Hr1G083810.4 , HORVU6Hr1G083810.5 , HORVU4Hr1G084930.2 , HORVU4Hr1G084930.3 , HORVU4Hr1G084930.1 , HORVU4Hr1G084930.6 , HORVU4Hr1G084930.7 , HORVU4Hr1G084930.4 , HORVU4Hr1G084930.5 , HORVU4Hr1G084930.8 , HORVU4Hr1G084930.9
Wheat TraesCS5A02G516400 , TraesCS4B02G347800 , TraesCS4D02G342700 , TraesCS6A02G349300 , TraesCS6D02G331800
Populus -


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cDNA sequences
Sobic.001G358300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G103200 DNA binding protein, putative, expressed -
2 Sobic.001G415000 expressed protein -
3 Sobic.004G059900 bZIP transcription factor domain containing protein, expressed -
4 Sobic.003G002400 dnaJ domain containing protein, expressed K09510: DnaJ homolog subfamily B member 4
5 Sobic.004G271700 ADP-ribosylation factor, putative, expressed K07977: Arf/Sar family, other
6 Sobic.004G350300 No apical meristem protein, putative, expressed -
7 Sobic.004G058200 cytidylyltransferase domain containing protein, expressed K00968: choline-phosphate cytidylyltransferase
8 Sobic.001G434900 serine palmitoyltransferase 1, putative, expressed K00654: serine palmitoyltransferase
9 Sobic.003G238000 ras-related protein, putative, expressed K07936: GTP-binding nuclear protein Ran
10 Sobic.010G188100 SNF7 domain containing protein, putative, expressed K12194: CHMP4, SNF7, charged multivesicular body protein 4
11 Sobic.004G020000 translation initiation factor eIF3 subunit, putative, expressed K03245: translation initiation factor 3 subunit J
12 Sobic.002G083266 - K00326: cytochrome-b5 reductase
13 Sobic.002G293300 octicosapeptide/Phox/Bem1p, putative, expressed -
14 Sobic.001G433400 Zinc finger, C3HC4 type domain containing protein, expressed -
15 Sobic.009G180500 Myb-like DNA-binding domain containing protein, putative, expressed -
16 Sobic.010G094600 zinc finger, C3HC4 type, domain containing protein, expressed -
17 Sobic.003G395100 tetratricopeptide repeat protein 1, putative, expressed -
18 Sobic.002G362900 IBS1, putative, expressed -
19 Sobic.009G231200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein of unknown function DUF1421 domain containing protein, expressed -
20 Sobic.010G052800 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -


Gene co-expression network
sample Sobic001G358300 Sobic001G358300 Sobic001G103200 Sobic001G103200 Sobic001G358300--Sobic001G103200 Sobic001G415000 Sobic001G415000 Sobic001G358300--Sobic001G415000 Sobic004G059900 Sobic004G059900 Sobic001G358300--Sobic004G059900 Sobic003G002400 Sobic003G002400 Sobic001G358300--Sobic003G002400 Sobic004G271700 Sobic004G271700 Sobic001G358300--Sobic004G271700 Sobic004G350300 Sobic004G350300 Sobic001G358300--Sobic004G350300 Sobic004G058200 Sobic004G058200 Sobic001G358300--Sobic004G058200 Sobic001G434900 Sobic001G434900 Sobic001G358300--Sobic001G434900 Sobic003G238000 Sobic003G238000 Sobic001G358300--Sobic003G238000 Sobic001G516100 Sobic001G516100 Sobic001G103200--Sobic001G516100 Sobic001G103200--Sobic001G358300 Sobic001G103200--Sobic004G271700 Sobic001G510700 Sobic001G510700 Sobic001G103200--Sobic001G510700 Sobic009G135100 Sobic009G135100 Sobic001G103200--Sobic009G135100 Sobic009G219900 Sobic009G219900 Sobic001G103200--Sobic009G219900 Sobic001G103200--Sobic004G350300 Sobic001G350900 Sobic001G350900 Sobic001G103200--Sobic001G350900 Sobic001G103200--Sobic003G002400 Sobic002G083266 Sobic002G083266 Sobic001G415000--Sobic002G083266 Sobic001G440700 Sobic001G440700 Sobic001G415000--Sobic001G440700 Sobic006G264300 Sobic006G264300 Sobic001G415000--Sobic006G264300 Sobic004G020000 Sobic004G020000 Sobic001G415000--Sobic004G020000 Sobic010G026700 Sobic010G026700 Sobic001G415000--Sobic010G026700 Sobic002G202300 Sobic002G202300 Sobic001G415000--Sobic002G202300 Sobic002G385900 Sobic002G385900 Sobic001G415000--Sobic002G385900 Sobic001G040800 Sobic001G040800 Sobic001G415000--Sobic001G040800 Sobic001G224400 Sobic001G224400 Sobic001G415000--Sobic001G224400 Sobic004G059900--Sobic001G358300 Sobic004G059900--Sobic003G238000 Sobic002G343300 Sobic002G343300 Sobic004G059900--Sobic002G343300 Sobic001G311100 Sobic001G311100 Sobic004G059900--Sobic001G311100 Sobic007G216500 Sobic007G216500 Sobic004G059900--Sobic007G216500 Sobic002G293300 Sobic002G293300 Sobic004G059900--Sobic002G293300 Sobic004G059900--Sobic001G415000 Sobic009G231200 Sobic009G231200 Sobic004G059900--Sobic009G231200 Sobic002G397600 Sobic002G397600 Sobic004G059900--Sobic002G397600 Sobic003G002400--Sobic004G350300 Sobic004G274400 Sobic004G274400 Sobic003G002400--Sobic004G274400 Sobic003G002400--Sobic001G434900 Sobic002G045300 Sobic002G045300 Sobic003G002400--Sobic002G045300 Sobic003G220600 Sobic003G220600 Sobic003G002400--Sobic003G220600 Sobic003G002400--Sobic004G271700 Sobic001G122500 Sobic001G122500 Sobic003G002400--Sobic001G122500 Sobic006G033200 Sobic006G033200 Sobic003G002400--Sobic006G033200 Sobic010G101500 Sobic010G101500 Sobic003G002400--Sobic010G101500 Sobic008G115500 Sobic008G115500 Sobic004G271700--Sobic008G115500 Sobic004G271700--Sobic001G516100 Sobic004G271700--Sobic003G002400 Sobic004G271700--Sobic009G219900 Sobic001G158500 Sobic001G158500 Sobic004G271700--Sobic001G158500 Sobic004G271700--Sobic001G103200 Sobic010G188100 Sobic010G188100 Sobic004G271700--Sobic010G188100 Sobic001G220400 Sobic001G220400 Sobic004G271700--Sobic001G220400 Sobic004G271700--Sobic002G293300 Sobic004G350300--Sobic003G002400 Sobic004G350300--Sobic001G434900 Sobic003G248600 Sobic003G248600 Sobic004G350300--Sobic003G248600 Sobic004G321900 Sobic004G321900 Sobic004G350300--Sobic004G321900 Sobic004G183400 Sobic004G183400 Sobic004G350300--Sobic004G183400 Sobic004G350300--Sobic001G122500 Sobic004G350300--Sobic002G045300 Sobic001G433400 Sobic001G433400 Sobic004G350300--Sobic001G433400 Sobic004G350300--Sobic004G274400 Sobic004G058200--Sobic010G188100 Sobic009G135900 Sobic009G135900 Sobic004G058200--Sobic009G135900 Sobic007G114200 Sobic007G114200 Sobic004G058200--Sobic007G114200 Sobic004G058200--Sobic001G358300 Sobic009G217900 Sobic009G217900 Sobic004G058200--Sobic009G217900 Sobic002G363100 Sobic002G363100 Sobic004G058200--Sobic002G363100 Sobic001G301800 Sobic001G301800 Sobic004G058200--Sobic001G301800 Sobic003G395100 Sobic003G395100 Sobic004G058200--Sobic003G395100 Sobic001G328200 Sobic001G328200 Sobic004G058200--Sobic001G328200 Sobic002G122700 Sobic002G122700 Sobic001G434900--Sobic002G122700 Sobic001G434900--Sobic004G350300 Sobic001G434900--Sobic003G002400 Sobic003G367300 Sobic003G367300 Sobic001G434900--Sobic003G367300 Sobic006G225600 Sobic006G225600 Sobic001G434900--Sobic006G225600 Sobic005G176000 Sobic005G176000 Sobic001G434900--Sobic005G176000 Sobic001G434900--Sobic003G248600 Sobic001G162100 Sobic001G162100 Sobic001G434900--Sobic001G162100 Sobic001G434900--Sobic004G274400 Sobic003G238000--Sobic002G293300 Sobic003G238000--Sobic004G059900 Sobic001G436000 Sobic001G436000 Sobic003G238000--Sobic001G436000 Sobic001G523200 Sobic001G523200 Sobic003G238000--Sobic001G523200 Sobic003G032900 Sobic003G032900 Sobic003G238000--Sobic003G032900 Sobic003G238000--Sobic001G358300 Sobic009G180500 Sobic009G180500 Sobic003G238000--Sobic009G180500 Sobic007G140900 Sobic007G140900 Sobic003G238000--Sobic007G140900 Sobic002G379400 Sobic002G379400 Sobic003G238000--Sobic002G379400
Octagon: transcription factors


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