Gene annotation
Transcriptome id Sobic.009G180500.1
Synonym Sb09g024090
Functional annotation Myb-like DNA-binding domain containing protein, putative, expressed
UniProt C5Z088
Pfam PF00249 PF14379
Panther DB PTHR31314 PTHR31314:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G01060 : myb-like HTH transcriptional regulator family protein
RAP-DB (Rice) LOC_Os05g41240.2 : Myb-like DNA-binding domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a044074 , Zm00025a018938
Brachypodium PNT71015 , KQK05647 , KQK05648 , KQK05649
Barley HORVU1Hr1G068320.5 , HORVU1Hr1G068320.6 , HORVU0Hr1G025540.2 , HORVU0Hr1G025540.3 , HORVU0Hr1G025540.1 , HORVU0Hr1G025540.6 , HORVU0Hr1G025540.7 , HORVU0Hr1G025540.4 , HORVU0Hr1G025540.5 , HORVU0Hr1G025540.8 , HORVU1Hr1G068320.3 , HORVU1Hr1G068320.4 , HORVU1Hr1G068320.1 , HORVU1Hr1G068320.2
Wheat TraesCS1A02G309200 , TraesCS1A02G309200 , TraesCS1A02G309200 , TraesCS1D02G308600 , TraesCS1D02G308600 , TraesCS1B02G320000 , TraesCS1B02G320000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G309200 expressed protein K12617: PATL1, DNA topoisomerase 2-associated protein PAT1
2 Sobic.009G231200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein of unknown function DUF1421 domain containing protein, expressed -
3 Sobic.002G293300 octicosapeptide/Phox/Bem1p, putative, expressed -
4 Sobic.009G200800 protein kinase domain containing protein, expressed -
5 Sobic.003G002400 dnaJ domain containing protein, expressed K09510: DnaJ homolog subfamily B member 4
6 Sobic.001G426800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA recognition motif containing protein, expressed -
7 Sobic.001G031600 calmodulin binding protein, putative, expressed -
8 Sobic.003G238000 ras-related protein, putative, expressed K07936: GTP-binding nuclear protein Ran
9 Sobic.001G358300 SNARE associated Golgi protein, putative, expressed -
10 Sobic.006G033200 Sec1 family transport protein, putative, expressed K15292: STXBP1, syntaxin-binding protein 1
11 Sobic.001G434900 serine palmitoyltransferase 1, putative, expressed K00654: serine palmitoyltransferase
12 Sobic.008G152600 LIM domain-containing protein, putative, expressed -
13 Sobic.003G367300 actin, putative, expressed K10355: actin, other eukaryote
14 Sobic.009G066900 DnaK family protein, putative, expressed K09489: heat shock 70kDa protein 4
15 Sobic.008G047400 OsFBT14 - F-box and tubby domain containing protein, expressed -
16 Sobic.001G516100 protein kinase family protein, putative, expressed K14500: BR-signaling kinase
17 Sobic.001G333600 membrane-anchored ubiquitin-fold protein, putative, expressed -
18 Sobic.009G258100 early-responsive to dehydration protein-related, putative, expressed -
19 Sobic.004G271700 ADP-ribosylation factor, putative, expressed K07977: Arf/Sar family, other
20 Sobic.009G183101 - -


Gene co-expression network
sample Sobic009G180500 Sobic009G180500 Sobic003G309200 Sobic003G309200 Sobic009G180500--Sobic003G309200 Sobic009G231200 Sobic009G231200 Sobic009G180500--Sobic009G231200 Sobic002G293300 Sobic002G293300 Sobic009G180500--Sobic002G293300 Sobic009G200800 Sobic009G200800 Sobic009G180500--Sobic009G200800 Sobic003G002400 Sobic003G002400 Sobic009G180500--Sobic003G002400 Sobic001G426800 Sobic001G426800 Sobic009G180500--Sobic001G426800 Sobic001G031600 Sobic001G031600 Sobic009G180500--Sobic001G031600 Sobic003G238000 Sobic003G238000 Sobic009G180500--Sobic003G238000 Sobic001G358300 Sobic001G358300 Sobic009G180500--Sobic001G358300 Sobic010G223700 Sobic010G223700 Sobic003G309200--Sobic010G223700 Sobic002G134600 Sobic002G134600 Sobic003G309200--Sobic002G134600 Sobic001G262700 Sobic001G262700 Sobic003G309200--Sobic001G262700 Sobic008G124900 Sobic008G124900 Sobic003G309200--Sobic008G124900 Sobic003G221900 Sobic003G221900 Sobic003G309200--Sobic003G221900 Sobic006G033200 Sobic006G033200 Sobic003G309200--Sobic006G033200 Sobic002G383600 Sobic002G383600 Sobic003G309200--Sobic002G383600 Sobic010G130000 Sobic010G130000 Sobic003G309200--Sobic010G130000 Sobic001G389100 Sobic001G389100 Sobic003G309200--Sobic001G389100 Sobic004G031600 Sobic004G031600 Sobic009G231200--Sobic004G031600 Sobic009G231200--Sobic002G293300 Sobic010G052800 Sobic010G052800 Sobic009G231200--Sobic010G052800 Sobic009G231200--Sobic009G180500 Sobic001G082900 Sobic001G082900 Sobic009G231200--Sobic001G082900 Sobic009G231200--Sobic009G200800 Sobic001G333600 Sobic001G333600 Sobic009G231200--Sobic001G333600 Sobic005G026100 Sobic005G026100 Sobic009G231200--Sobic005G026100 Sobic009G231200--Sobic001G031600 Sobic003G367300 Sobic003G367300 Sobic002G293300--Sobic003G367300 Sobic001G436000 Sobic001G436000 Sobic002G293300--Sobic001G436000 Sobic002G379400 Sobic002G379400 Sobic002G293300--Sobic002G379400 Sobic002G293300--Sobic010G052800 Sobic002G293300--Sobic009G231200 Sobic002G330300 Sobic002G330300 Sobic002G293300--Sobic002G330300 Sobic002G293300--Sobic001G082900 Sobic004G025000 Sobic004G025000 Sobic002G293300--Sobic004G025000 Sobic001G516100 Sobic001G516100 Sobic002G293300--Sobic001G516100 Sobic008G152600 Sobic008G152600 Sobic009G200800--Sobic008G152600 Sobic010G251300 Sobic010G251300 Sobic009G200800--Sobic010G251300 Sobic009G200800--Sobic003G309200 Sobic009G200800--Sobic008G124900 Sobic009G200800--Sobic009G231200 Sobic009G200800--Sobic001G333600 Sobic009G200800--Sobic009G180500 Sobic008G047400 Sobic008G047400 Sobic009G200800--Sobic008G047400 Sobic010G249100 Sobic010G249100 Sobic009G200800--Sobic010G249100 Sobic004G350300 Sobic004G350300 Sobic003G002400--Sobic004G350300 Sobic004G274400 Sobic004G274400 Sobic003G002400--Sobic004G274400 Sobic001G434900 Sobic001G434900 Sobic003G002400--Sobic001G434900 Sobic002G045300 Sobic002G045300 Sobic003G002400--Sobic002G045300 Sobic003G220600 Sobic003G220600 Sobic003G002400--Sobic003G220600 Sobic004G271700 Sobic004G271700 Sobic003G002400--Sobic004G271700 Sobic001G122500 Sobic001G122500 Sobic003G002400--Sobic001G122500 Sobic003G002400--Sobic006G033200 Sobic010G101500 Sobic010G101500 Sobic003G002400--Sobic010G101500 Sobic009G183101 Sobic009G183101 Sobic001G426800--Sobic009G183101 Sobic009G069300 Sobic009G069300 Sobic001G426800--Sobic009G069300 Sobic003G339700 Sobic003G339700 Sobic001G426800--Sobic003G339700 Sobic001G426800--Sobic009G180500 Sobic004G276200 Sobic004G276200 Sobic001G426800--Sobic004G276200 Sobic001G426800--Sobic009G200800 Sobic006G150400 Sobic006G150400 Sobic001G426800--Sobic006G150400 Sobic004G323400 Sobic004G323400 Sobic001G426800--Sobic004G323400 Sobic003G313900 Sobic003G313900 Sobic001G426800--Sobic003G313900 Sobic001G105500 Sobic001G105500 Sobic001G031600--Sobic001G105500 Sobic002G413000 Sobic002G413000 Sobic001G031600--Sobic002G413000 Sobic006G209400 Sobic006G209400 Sobic001G031600--Sobic006G209400 Sobic009G193400 Sobic009G193400 Sobic001G031600--Sobic009G193400 Sobic001G031600--Sobic003G002400 Sobic001G031600--Sobic003G309200 Sobic007G019800 Sobic007G019800 Sobic001G031600--Sobic007G019800 Sobic001G031600--Sobic004G031600 Sobic001G541100 Sobic001G541100 Sobic001G031600--Sobic001G541100 Sobic003G238000--Sobic002G293300 Sobic004G059900 Sobic004G059900 Sobic003G238000--Sobic004G059900 Sobic003G238000--Sobic001G436000 Sobic001G523200 Sobic001G523200 Sobic003G238000--Sobic001G523200 Sobic003G032900 Sobic003G032900 Sobic003G238000--Sobic003G032900 Sobic003G238000--Sobic001G358300 Sobic003G238000--Sobic009G180500 Sobic007G140900 Sobic007G140900 Sobic003G238000--Sobic007G140900 Sobic003G238000--Sobic002G379400 Sobic001G103200 Sobic001G103200 Sobic001G358300--Sobic001G103200 Sobic001G415000 Sobic001G415000 Sobic001G358300--Sobic001G415000 Sobic001G358300--Sobic004G059900 Sobic001G358300--Sobic003G002400 Sobic001G358300--Sobic004G271700 Sobic001G358300--Sobic004G350300 Sobic004G058200 Sobic004G058200 Sobic001G358300--Sobic004G058200 Sobic001G358300--Sobic001G434900 Sobic001G358300--Sobic003G238000
Octagon: transcription factors


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