Gene annotation
Transcriptome id Sobic.009G258100.1
Synonym Sb09g030770
Functional annotation early-responsive to dehydration protein-related, putative, expressed
UniProt C5YX25
Pfam PF14703 PF13967 PF02714
Panther DB PTHR13018 PTHR13018:SF48
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016020; membrane


Orthologs (automatic annotation)
TAIR AT4G22120 : ERD (early-responsive to dehydration stress) family protein
RAP-DB (Rice) LOC_Os05g51630.1 : early-responsive to dehydration protein-related, putative, expressed
MaizeGDB (Corn) Zm00025a036820
Brachypodium KQK08207 , KQK08048 , KQK08209 , KQK08208 , KQK08047 , KQK08210 , KQK08211
Barley HORVU1Hr1G007290.7 , HORVU1Hr1G007290.6 , HORVU1Hr1G007290.5 , HORVU1Hr1G007290.4 , HORVU1Hr1G007290.3 , HORVU1Hr1G007290.2 , HORVU1Hr1G007290.1 , HORVU1Hr1G007290.9 , HORVU1Hr1G007290.8 , HORVU1Hr1G007290.18 , HORVU1Hr1G007290.17 , HORVU1Hr1G007290.16 , HORVU1Hr1G007290.15 , HORVU1Hr1G007290.14 , HORVU1Hr1G007290.13 , HORVU1Hr1G007290.12 , HORVU1Hr1G007290.11 , HORVU1Hr1G007290.10 , HORVU1Hr1G004230.4 , HORVU1Hr1G004230.5 , HORVU1Hr1G004230.6 , HORVU1Hr1G004230.1 , HORVU1Hr1G004230.2 , HORVU1Hr1G004230.3
Wheat TraesCS1B02G036500 , TraesCS1A02G034100 , TraesCS2A02G486800 , TraesCS1D02G035600 , TraesCS1D02G029500 , TraesCS1A02G029300
Populus -


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cDNA sequences
Sobic.009G258100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G358800 interferon-related developmental regulator, putative, expressed -
2 Sobic.010G230500 expressed protein -
3 Sobic.008G077600 diacylglycerol kinase 1, putative, expressed K00901: dgkA, diacylglycerol kinase (ATP)
4 Sobic.003G425300 Phycoerythrobilin ferredoxin oxidoreductase(PubMedID : 24906815)@phycoerythrobilin ferredoxin oxidoreductase, putative, expressed K08101: phytochromobilin:ferredoxin oxidoreductase
5 Sobic.003G373600 -(PubMedID : 26976818)@serine hydroxymethyltransferase, mitochondrial precursor, putative, expressed K00600: glyA, glycine hydroxymethyltransferase
6 Sobic.009G129800 endo-1,3@1,4-beta-D-glucanase precursor, putative, expressed -
7 Sobic.002G290400 Protein kinase superfamily protein(PubMedID : 26465154)@serine/threonine-protein kinase SRPK1, putative, expressed -
8 Sobic.003G350800 SLT1 protein, putative, expressed -
9 Sobic.009G180500 Myb-like DNA-binding domain containing protein, putative, expressed -
10 Sobic.003G295900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
11 Sobic.002G217700 growth regulator related protein, putative, expressed -
12 Sobic.010G251300 OsSBeL1 - Putative Serine Beta-Lactamase homologue, expressed K08869: ADCK, aarF domain-containing kinase
13 Sobic.001G143000 Phosphatase(PubMedID : 30367619)@BTBA4 - Bric-a-Brac,Tramtrack, Broad Complex BTB domain with Ankyrin repeat region, expressed K14508: regulatory protein NPR1
14 Sobic.002G291200 UDP-glucose Pyrophosphorylase(PubMedID : 26616172)@UTP--glucose-1-phosphate uridylyltransferase, putative, expressed K00963: UGP2, galU, UTP--glucose-1-phosphate uridylyltransferase
15 Sobic.001G031600 calmodulin binding protein, putative, expressed -
16 Sobic.001G406100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@mitochondrial carrier protein, putative, expressed K15100: SLC25A1, solute carrier family 25 (mitochondrial citrate transporter), member 1
17 Sobic.002G417300 Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.31 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
18 Sobic.008G047400 OsFBT14 - F-box and tubby domain containing protein, expressed -
19 Sobic.001G082000 zinc finger family protein, putative, expressed K06874: zinc finger protein
20 Sobic.008G110300 OsFBX448 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic009G258100 Sobic009G258100 Sobic002G358800 Sobic002G358800 Sobic009G258100--Sobic002G358800 Sobic010G230500 Sobic010G230500 Sobic009G258100--Sobic010G230500 Sobic008G077600 Sobic008G077600 Sobic009G258100--Sobic008G077600 Sobic003G425300 Sobic003G425300 Sobic009G258100--Sobic003G425300 Sobic003G373600 Sobic003G373600 Sobic009G258100--Sobic003G373600 Sobic009G129800 Sobic009G129800 Sobic009G258100--Sobic009G129800 Sobic002G290400 Sobic002G290400 Sobic009G258100--Sobic002G290400 Sobic003G350800 Sobic003G350800 Sobic009G258100--Sobic003G350800 Sobic009G180500 Sobic009G180500 Sobic009G258100--Sobic009G180500 Sobic001G333600 Sobic001G333600 Sobic002G358800--Sobic001G333600 Sobic001G328200 Sobic001G328200 Sobic002G358800--Sobic001G328200 Sobic002G217700 Sobic002G217700 Sobic002G358800--Sobic002G217700 Sobic002G358800--Sobic009G258100 Sobic002G358800--Sobic010G230500 Sobic002G358800--Sobic003G350800 Sobic001G031600 Sobic001G031600 Sobic002G358800--Sobic001G031600 Sobic002G358400 Sobic002G358400 Sobic002G358800--Sobic002G358400 Sobic006G092400 Sobic006G092400 Sobic002G358800--Sobic006G092400 Sobic010G074300 Sobic010G074300 Sobic010G230500--Sobic010G074300 Sobic003G295900 Sobic003G295900 Sobic010G230500--Sobic003G295900 Sobic004G189200 Sobic004G189200 Sobic010G230500--Sobic004G189200 Sobic008G089900 Sobic008G089900 Sobic010G230500--Sobic008G089900 Sobic004G103000 Sobic004G103000 Sobic010G230500--Sobic004G103000 Sobic010G230500--Sobic002G358800 Sobic008G077500 Sobic008G077500 Sobic010G230500--Sobic008G077500 Sobic007G090900 Sobic007G090900 Sobic010G230500--Sobic007G090900 Sobic010G230500--Sobic002G290400 Sobic010G165500 Sobic010G165500 Sobic008G077600--Sobic010G165500 Sobic010G232100 Sobic010G232100 Sobic008G077600--Sobic010G232100 Sobic008G077600--Sobic009G258100 Sobic006G099700 Sobic006G099700 Sobic008G077600--Sobic006G099700 Sobic001G143000 Sobic001G143000 Sobic008G077600--Sobic001G143000 Sobic001G450700 Sobic001G450700 Sobic008G077600--Sobic001G450700 Sobic003G238000 Sobic003G238000 Sobic008G077600--Sobic003G238000 Sobic006G178000 Sobic006G178000 Sobic008G077600--Sobic006G178000 Sobic006G261300 Sobic006G261300 Sobic008G077600--Sobic006G261300 Sobic004G323400 Sobic004G323400 Sobic003G425300--Sobic004G323400 Sobic002G417300 Sobic002G417300 Sobic003G425300--Sobic002G417300 Sobic002G295100 Sobic002G295100 Sobic003G425300--Sobic002G295100 Sobic003G425300--Sobic003G373600 Sobic005G132000 Sobic005G132000 Sobic003G425300--Sobic005G132000 Sobic003G277400 Sobic003G277400 Sobic003G425300--Sobic003G277400 Sobic003G426900 Sobic003G426900 Sobic003G425300--Sobic003G426900 Sobic003G428600 Sobic003G428600 Sobic003G425300--Sobic003G428600 Sobic003G440300 Sobic003G440300 Sobic003G425300--Sobic003G440300 Sobic003G157900 Sobic003G157900 Sobic003G373600--Sobic003G157900 Sobic005G062700 Sobic005G062700 Sobic003G373600--Sobic005G062700 Sobic003G373600--Sobic003G425300 Sobic003G381700 Sobic003G381700 Sobic003G373600--Sobic003G381700 Sobic005G172400 Sobic005G172400 Sobic003G373600--Sobic005G172400 Sobic001G276300 Sobic001G276300 Sobic003G373600--Sobic001G276300 Sobic007G079400 Sobic007G079400 Sobic003G373600--Sobic007G079400 Sobic003G373600--Sobic008G077500 Sobic008G187100 Sobic008G187100 Sobic003G373600--Sobic008G187100 Sobic001G292000 Sobic001G292000 Sobic009G129800--Sobic001G292000 Sobic009G129800--Sobic009G258100 Sobic009G129800--Sobic003G425300 Sobic009G129800--Sobic010G165500 Sobic004G057200 Sobic004G057200 Sobic009G129800--Sobic004G057200 Sobic001G412800 Sobic001G412800 Sobic009G129800--Sobic001G412800 Sobic009G129800--Sobic006G261300 Sobic002G204200 Sobic002G204200 Sobic009G129800--Sobic002G204200 Sobic009G129800--Sobic008G089900 Sobic006G209400 Sobic006G209400 Sobic002G290400--Sobic006G209400 Sobic003G076500 Sobic003G076500 Sobic002G290400--Sobic003G076500 Sobic010G251300 Sobic010G251300 Sobic002G290400--Sobic010G251300 Sobic003G309200 Sobic003G309200 Sobic002G290400--Sobic003G309200 Sobic001G414500 Sobic001G414500 Sobic002G290400--Sobic001G414500 Sobic002G290400--Sobic008G089900 Sobic002G290400--Sobic006G092400 Sobic004G118200 Sobic004G118200 Sobic002G290400--Sobic004G118200 Sobic002G290400--Sobic010G230500 Sobic009G246300 Sobic009G246300 Sobic003G350800--Sobic009G246300 Sobic003G350800--Sobic001G333600 Sobic003G350800--Sobic010G251300 Sobic003G043300 Sobic003G043300 Sobic003G350800--Sobic003G043300 Sobic003G350800--Sobic002G358800 Sobic001G221800 Sobic001G221800 Sobic003G350800--Sobic001G221800 Sobic003G350800--Sobic002G290400 Sobic003G350800--Sobic010G230500 Sobic003G350800--Sobic008G077500 Sobic009G180500--Sobic003G309200 Sobic009G231200 Sobic009G231200 Sobic009G180500--Sobic009G231200 Sobic002G293300 Sobic002G293300 Sobic009G180500--Sobic002G293300 Sobic009G200800 Sobic009G200800 Sobic009G180500--Sobic009G200800 Sobic003G002400 Sobic003G002400 Sobic009G180500--Sobic003G002400 Sobic001G426800 Sobic001G426800 Sobic009G180500--Sobic001G426800 Sobic009G180500--Sobic001G031600 Sobic009G180500--Sobic003G238000 Sobic001G358300 Sobic001G358300 Sobic009G180500--Sobic001G358300
Octagon: transcription factors


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