Gene annotation
Transcriptome id Sobic.002G217700.1
Synonym Sb02g025960
Functional annotation growth regulator related protein, putative, expressed
UniProt C5XDR8
Pfam PF10250
Panther DB PTHR31741 PTHR31741:SF8
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G35570 : O-fucosyltransferase family protein
RAP-DB (Rice) LOC_Os09g27080.1 : growth regulator related protein, putative, expressed
MaizeGDB (Corn) Zm00025a047181
Brachypodium KQJ90434 , PNT64688 , PNT64689 , KQJ90435
Barley HORVU5Hr1G061540.11 , HORVU5Hr1G061540.10 , HORVU5Hr1G061540.3 , HORVU5Hr1G061540.2 , HORVU5Hr1G061540.1 , HORVU5Hr1G061540.7 , HORVU5Hr1G061540.6 , HORVU5Hr1G061540.4 , HORVU5Hr1G061540.9 , HORVU5Hr1G061540.8 , HORVU5Hr1G061540.5
Wheat TraesCS5A02G209100 , TraesCS5D02G215300 , TraesCS5D02G215300 , TraesCS5D02G215300 , TraesCS5B02G207300 , TraesCS5B02G207300
Populus -


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cDNA sequences
Sobic.002G217700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G043300 early fruit mRNA, putative, expressed -
2 Sobic.002G358800 interferon-related developmental regulator, putative, expressed -
3 Sobic.010G251300 OsSBeL1 - Putative Serine Beta-Lactamase homologue, expressed K08869: ADCK, aarF domain-containing kinase
4 Sobic.003G221900 helix-loop-helix DNA-binding domain containing protein, expressed -
5 Sobic.003G220800 RNA recognition motif containing protein, putative, expressed K12741: heterogeneous nuclear ribonucleoprotein A1/A3
6 Sobic.003G373500 phosphatidylinositol-4-phosphate 5-Kinase, putative, expressed K00921: PIKFYVE, 1-phosphatidylinositol-3-phosphate 5-kinase
7 Sobic.001G333600 membrane-anchored ubiquitin-fold protein, putative, expressed -
8 Sobic.006G011300 membrane related protein CP5, putative, expressed -
9 Sobic.009G066900 DnaK family protein, putative, expressed K09489: heat shock 70kDa protein 4
10 Sobic.001G049500 - K11594: DDX3X, ATP-dependent RNA helicase DDX3X
11 Sobic.006G092400 calmodulin binding protein, putative, expressed -
12 Sobic.001G122832 - K13414: mitogen-activated protein kinase kinase kinase 1
13 Sobic.008G077500 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed -
14 Sobic.002G431600 protein kinase APK1B, chloroplast precursor, putative, expressed -
15 Sobic.003G224100 "domain confirmed by Pfam database, expressed in leaf and root"(PubMedID : 20499123)@OsGH3.5 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
16 Sobic.003G309200 expressed protein K12617: PATL1, DNA topoisomerase 2-associated protein PAT1
17 Sobic.010G074300 smr domain containing protein, expressed -
18 Sobic.010G013200 CPuORF21 - conserved peptide uORF-containing transcript, expressed K08829: male germ cell-associated kinase
19 Sobic.003G350800 SLT1 protein, putative, expressed -
20 Sobic.001G251800 OsFBK23 - F-box domain and kelch repeat containing protein, expressed -


Gene co-expression network
sample Sobic002G217700 Sobic002G217700 Sobic003G043300 Sobic003G043300 Sobic002G217700--Sobic003G043300 Sobic002G358800 Sobic002G358800 Sobic002G217700--Sobic002G358800 Sobic010G251300 Sobic010G251300 Sobic002G217700--Sobic010G251300 Sobic003G221900 Sobic003G221900 Sobic002G217700--Sobic003G221900 Sobic003G220800 Sobic003G220800 Sobic002G217700--Sobic003G220800 Sobic003G373500 Sobic003G373500 Sobic002G217700--Sobic003G373500 Sobic001G333600 Sobic001G333600 Sobic002G217700--Sobic001G333600 Sobic006G011300 Sobic006G011300 Sobic002G217700--Sobic006G011300 Sobic009G066900 Sobic009G066900 Sobic002G217700--Sobic009G066900 Sobic003G043300--Sobic003G220800 Sobic010G074300 Sobic010G074300 Sobic003G043300--Sobic010G074300 Sobic006G175800 Sobic006G175800 Sobic003G043300--Sobic006G175800 Sobic003G043300--Sobic010G251300 Sobic001G136800 Sobic001G136800 Sobic003G043300--Sobic001G136800 Sobic001G257700 Sobic001G257700 Sobic003G043300--Sobic001G257700 Sobic008G077500 Sobic008G077500 Sobic003G043300--Sobic008G077500 Sobic004G040900 Sobic004G040900 Sobic003G043300--Sobic004G040900 Sobic003G051000 Sobic003G051000 Sobic003G043300--Sobic003G051000 Sobic002G358800--Sobic001G333600 Sobic001G328200 Sobic001G328200 Sobic002G358800--Sobic001G328200 Sobic002G358800--Sobic002G217700 Sobic009G258100 Sobic009G258100 Sobic002G358800--Sobic009G258100 Sobic010G230500 Sobic010G230500 Sobic002G358800--Sobic010G230500 Sobic003G350800 Sobic003G350800 Sobic002G358800--Sobic003G350800 Sobic001G031600 Sobic001G031600 Sobic002G358800--Sobic001G031600 Sobic002G358400 Sobic002G358400 Sobic002G358800--Sobic002G358400 Sobic006G092400 Sobic006G092400 Sobic002G358800--Sobic006G092400 Sobic002G290400 Sobic002G290400 Sobic010G251300--Sobic002G290400 Sobic009G200800 Sobic009G200800 Sobic010G251300--Sobic009G200800 Sobic010G251300--Sobic003G043300 Sobic001G064200 Sobic001G064200 Sobic010G251300--Sobic001G064200 Sobic002G383600 Sobic002G383600 Sobic010G251300--Sobic002G383600 Sobic010G251300--Sobic003G350800 Sobic007G146400 Sobic007G146400 Sobic010G251300--Sobic007G146400 Sobic010G251300--Sobic001G333600 Sobic001G057700 Sobic001G057700 Sobic010G251300--Sobic001G057700 Sobic001G122832 Sobic001G122832 Sobic003G221900--Sobic001G122832 Sobic003G316500 Sobic003G316500 Sobic003G221900--Sobic003G316500 Sobic003G340600 Sobic003G340600 Sobic003G221900--Sobic003G340600 Sobic001G389100 Sobic001G389100 Sobic003G221900--Sobic001G389100 Sobic010G021500 Sobic010G021500 Sobic003G221900--Sobic010G021500 Sobic006G133900 Sobic006G133900 Sobic003G221900--Sobic006G133900 Sobic010G147100 Sobic010G147100 Sobic003G221900--Sobic010G147100 Sobic001G332500 Sobic001G332500 Sobic003G221900--Sobic001G332500 Sobic003G029700 Sobic003G029700 Sobic003G221900--Sobic003G029700 Sobic009G084000 Sobic009G084000 Sobic003G220800--Sobic009G084000 Sobic001G100900 Sobic001G100900 Sobic003G220800--Sobic001G100900 Sobic003G220800--Sobic003G043300 Sobic003G220800--Sobic010G074300 Sobic001G241100 Sobic001G241100 Sobic003G220800--Sobic001G241100 Sobic002G359400 Sobic002G359400 Sobic003G220800--Sobic002G359400 Sobic002G047700 Sobic002G047700 Sobic003G220800--Sobic002G047700 Sobic003G220800--Sobic006G092400 Sobic010G147000 Sobic010G147000 Sobic003G220800--Sobic010G147000 Sobic003G264100 Sobic003G264100 Sobic003G373500--Sobic003G264100 Sobic003G107500 Sobic003G107500 Sobic003G373500--Sobic003G107500 Sobic002G335000 Sobic002G335000 Sobic003G373500--Sobic002G335000 Sobic001G333100 Sobic001G333100 Sobic003G373500--Sobic001G333100 Sobic004G252900 Sobic004G252900 Sobic003G373500--Sobic004G252900 Sobic003G311900 Sobic003G311900 Sobic003G373500--Sobic003G311900 Sobic010G239900 Sobic010G239900 Sobic003G373500--Sobic010G239900 Sobic002G311100 Sobic002G311100 Sobic003G373500--Sobic002G311100 Sobic010G226000 Sobic010G226000 Sobic003G373500--Sobic010G226000 Sobic001G333600--Sobic002G358800 Sobic001G333600--Sobic003G350800 Sobic008G047400 Sobic008G047400 Sobic001G333600--Sobic008G047400 Sobic001G333600--Sobic010G251300 Sobic001G333600--Sobic009G200800 Sobic009G231200 Sobic009G231200 Sobic001G333600--Sobic009G231200 Sobic001G333600--Sobic009G066900 Sobic001G333600--Sobic002G217700 Sobic003G309200 Sobic003G309200 Sobic001G333600--Sobic003G309200 Sobic003G224100 Sobic003G224100 Sobic006G011300--Sobic003G224100 Sobic001G251800 Sobic001G251800 Sobic006G011300--Sobic001G251800 Sobic001G339500 Sobic001G339500 Sobic006G011300--Sobic001G339500 Sobic006G011300--Sobic003G043300 Sobic006G011300--Sobic006G175800 Sobic002G200700 Sobic002G200700 Sobic006G011300--Sobic002G200700 Sobic006G064200 Sobic006G064200 Sobic006G011300--Sobic006G064200 Sobic004G169000 Sobic004G169000 Sobic006G011300--Sobic004G169000 Sobic003G349200 Sobic003G349200 Sobic006G011300--Sobic003G349200 Sobic009G066900--Sobic003G309200 Sobic008G124900 Sobic008G124900 Sobic009G066900--Sobic008G124900 Sobic003G119700 Sobic003G119700 Sobic009G066900--Sobic003G119700 Sobic002G134600 Sobic002G134600 Sobic009G066900--Sobic002G134600 Sobic006G033200 Sobic006G033200 Sobic009G066900--Sobic006G033200 Sobic009G066900--Sobic001G333600 Sobic009G108700 Sobic009G108700 Sobic009G066900--Sobic009G108700 Sobic009G066900--Sobic008G047400 Sobic007G006900 Sobic007G006900 Sobic009G066900--Sobic007G006900
Octagon: transcription factors


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