Gene annotation
Transcriptome id Sobic.003G043300.1
Synonym Sb03g003810
Functional annotation early fruit mRNA, putative, expressed
UniProt C5XMQ3
Pfam -
Panther DB PTHR31365 PTHR31365:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G25670 : -
RAP-DB (Rice) LOC_Os01g08410.1 : early fruit mRNA, putative, expressed
MaizeGDB (Corn) Zm00025a035762 , Zm00025a005394 , Zm00025a023182
Brachypodium KQK03010
Barley HORVU3Hr1G022020.3 , HORVU3Hr1G022020.2 , HORVU3Hr1G022020.1 , HORVU3Hr1G022020.5 , HORVU3Hr1G022020.4
Wheat TraesCS3A02G119000 , TraesCS3D02G120900 , TraesCS3B02G138000
Populus -


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cDNA sequences
Sobic.003G043300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G220800 RNA recognition motif containing protein, putative, expressed K12741: heterogeneous nuclear ribonucleoprotein A1/A3
2 Sobic.010G074300 smr domain containing protein, expressed -
3 Sobic.006G175800 acyl-CoA thioesterase 2, putative, expressed K01068: acyl-coenzyme A thioesterase 1/2/4
4 Sobic.010G251300 OsSBeL1 - Putative Serine Beta-Lactamase homologue, expressed K08869: ADCK, aarF domain-containing kinase
5 Sobic.001G136800 dual specificity protein phosphatase, putative, expressed -
6 Sobic.001G257700 ribosomal protein S18 containing protein, expressed -
7 Sobic.008G077500 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed -
8 Sobic.004G040900 CPuORF14 - conserved peptide uORF-containing transcript, expressed K03262: translation initiation factor 5
9 Sobic.003G051000 expressed protein -
10 Sobic.002G217700 growth regulator related protein, putative, expressed -
11 Sobic.001G049500 - K11594: DDX3X, ATP-dependent RNA helicase DDX3X
12 Sobic.002G305000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@small G protein family protein, putative, expressed -
13 Sobic.001G122832 - K13414: mitogen-activated protein kinase kinase kinase 1
14 Sobic.003G350800 SLT1 protein, putative, expressed -
15 Sobic.001G241100 DNA-binding protein-like, putative, expressed K10624: E3 ubiquitin-protein ligase RBBP6
16 Sobic.006G092400 calmodulin binding protein, putative, expressed -
17 Sobic.004G042200 OsFBO8 - F-box and other domain containing protein, expressed K12115: clock-associated PAS protein ZTL
18 Sobic.010G013200 CPuORF21 - conserved peptide uORF-containing transcript, expressed K08829: male germ cell-associated kinase
19 Sobic.003G354600 csAtPR5, putative, expressed -
20 Sobic.009G068500 expressed protein -


Gene co-expression network
sample Sobic003G043300 Sobic003G043300 Sobic003G220800 Sobic003G220800 Sobic003G043300--Sobic003G220800 Sobic010G074300 Sobic010G074300 Sobic003G043300--Sobic010G074300 Sobic006G175800 Sobic006G175800 Sobic003G043300--Sobic006G175800 Sobic010G251300 Sobic010G251300 Sobic003G043300--Sobic010G251300 Sobic001G136800 Sobic001G136800 Sobic003G043300--Sobic001G136800 Sobic001G257700 Sobic001G257700 Sobic003G043300--Sobic001G257700 Sobic008G077500 Sobic008G077500 Sobic003G043300--Sobic008G077500 Sobic004G040900 Sobic004G040900 Sobic003G043300--Sobic004G040900 Sobic003G051000 Sobic003G051000 Sobic003G043300--Sobic003G051000 Sobic009G084000 Sobic009G084000 Sobic003G220800--Sobic009G084000 Sobic001G100900 Sobic001G100900 Sobic003G220800--Sobic001G100900 Sobic003G220800--Sobic003G043300 Sobic003G220800--Sobic010G074300 Sobic001G241100 Sobic001G241100 Sobic003G220800--Sobic001G241100 Sobic002G359400 Sobic002G359400 Sobic003G220800--Sobic002G359400 Sobic002G047700 Sobic002G047700 Sobic003G220800--Sobic002G047700 Sobic006G092400 Sobic006G092400 Sobic003G220800--Sobic006G092400 Sobic010G147000 Sobic010G147000 Sobic003G220800--Sobic010G147000 Sobic010G147100 Sobic010G147100 Sobic010G074300--Sobic010G147100 Sobic004G118200 Sobic004G118200 Sobic010G074300--Sobic004G118200 Sobic007G190000 Sobic007G190000 Sobic010G074300--Sobic007G190000 Sobic001G080700 Sobic001G080700 Sobic010G074300--Sobic001G080700 Sobic002G311100 Sobic002G311100 Sobic010G074300--Sobic002G311100 Sobic010G131900 Sobic010G131900 Sobic010G074300--Sobic010G131900 Sobic009G074400 Sobic009G074400 Sobic010G074300--Sobic009G074400 Sobic003G316500 Sobic003G316500 Sobic010G074300--Sobic003G316500 Sobic001G268200 Sobic001G268200 Sobic010G074300--Sobic001G268200 Sobic010G262500 Sobic010G262500 Sobic006G175800--Sobic010G262500 Sobic004G169000 Sobic004G169000 Sobic006G175800--Sobic004G169000 Sobic002G305000 Sobic002G305000 Sobic006G175800--Sobic002G305000 Sobic002G187700 Sobic002G187700 Sobic006G175800--Sobic002G187700 Sobic001G488700 Sobic001G488700 Sobic006G175800--Sobic001G488700 Sobic003G190400 Sobic003G190400 Sobic006G175800--Sobic003G190400 Sobic006G175800--Sobic003G043300 Sobic001G500800 Sobic001G500800 Sobic006G175800--Sobic001G500800 Sobic010G196500 Sobic010G196500 Sobic006G175800--Sobic010G196500 Sobic002G290400 Sobic002G290400 Sobic010G251300--Sobic002G290400 Sobic009G200800 Sobic009G200800 Sobic010G251300--Sobic009G200800 Sobic010G251300--Sobic003G043300 Sobic001G064200 Sobic001G064200 Sobic010G251300--Sobic001G064200 Sobic002G383600 Sobic002G383600 Sobic010G251300--Sobic002G383600 Sobic003G350800 Sobic003G350800 Sobic010G251300--Sobic003G350800 Sobic007G146400 Sobic007G146400 Sobic010G251300--Sobic007G146400 Sobic001G333600 Sobic001G333600 Sobic010G251300--Sobic001G333600 Sobic001G057700 Sobic001G057700 Sobic010G251300--Sobic001G057700 Sobic003G354600 Sobic003G354600 Sobic001G136800--Sobic003G354600 Sobic005G199400 Sobic005G199400 Sobic001G136800--Sobic005G199400 Sobic010G125500 Sobic010G125500 Sobic001G136800--Sobic010G125500 Sobic003G264800 Sobic003G264800 Sobic001G136800--Sobic003G264800 Sobic004G244900 Sobic004G244900 Sobic001G136800--Sobic004G244900 Sobic009G201300 Sobic009G201300 Sobic001G136800--Sobic009G201300 Sobic005G106600 Sobic005G106600 Sobic001G136800--Sobic005G106600 Sobic003G311900 Sobic003G311900 Sobic001G136800--Sobic003G311900 Sobic002G091600 Sobic002G091600 Sobic001G136800--Sobic002G091600 Sobic006G105800 Sobic006G105800 Sobic001G257700--Sobic006G105800 Sobic008G133600 Sobic008G133600 Sobic001G257700--Sobic008G133600 Sobic001G257700--Sobic003G043300 Sobic001G257700--Sobic003G220800 Sobic002G309900 Sobic002G309900 Sobic001G257700--Sobic002G309900 Sobic007G005400 Sobic007G005400 Sobic001G257700--Sobic007G005400 Sobic001G257700--Sobic002G091600 Sobic001G003100 Sobic001G003100 Sobic001G257700--Sobic001G003100 Sobic001G257700--Sobic001G136800 Sobic007G090900 Sobic007G090900 Sobic008G077500--Sobic007G090900 Sobic004G268300 Sobic004G268300 Sobic008G077500--Sobic004G268300 Sobic001G243200 Sobic001G243200 Sobic008G077500--Sobic001G243200 Sobic008G052900 Sobic008G052900 Sobic008G077500--Sobic008G052900 Sobic009G103000 Sobic009G103000 Sobic008G077500--Sobic009G103000 Sobic006G212800 Sobic006G212800 Sobic008G077500--Sobic006G212800 Sobic003G157900 Sobic003G157900 Sobic008G077500--Sobic003G157900 Sobic003G260100 Sobic003G260100 Sobic008G077500--Sobic003G260100 Sobic002G162400 Sobic002G162400 Sobic008G077500--Sobic002G162400 Sobic004G040900--Sobic002G359400 Sobic002G294800 Sobic002G294800 Sobic004G040900--Sobic002G294800 Sobic010G013200 Sobic010G013200 Sobic004G040900--Sobic010G013200 Sobic001G402500 Sobic001G402500 Sobic004G040900--Sobic001G402500 Sobic008G070800 Sobic008G070800 Sobic004G040900--Sobic008G070800 Sobic001G120500 Sobic001G120500 Sobic004G040900--Sobic001G120500 Sobic008G183700 Sobic008G183700 Sobic004G040900--Sobic008G183700 Sobic004G296400 Sobic004G296400 Sobic004G040900--Sobic004G296400 Sobic003G355900 Sobic003G355900 Sobic004G040900--Sobic003G355900 Sobic007G164000 Sobic007G164000 Sobic003G051000--Sobic007G164000 Sobic003G051000--Sobic001G057700 Sobic003G051000--Sobic004G169000 Sobic005G084800 Sobic005G084800 Sobic003G051000--Sobic005G084800 Sobic010G236300 Sobic010G236300 Sobic003G051000--Sobic010G236300 Sobic001G498000 Sobic001G498000 Sobic003G051000--Sobic001G498000 Sobic003G051000--Sobic003G043300 Sobic003G051000--Sobic002G187700 Sobic003G051000--Sobic003G355900
Octagon: transcription factors


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