Gene annotation
Transcriptome id Sobic.003G350800.1
Synonym SLT1, Sb03g039370
Functional annotation SLT1 protein, putative, expressed
UniProt A0A1B6Q6X5
Pfam -
Panther DB PTHR33981 PTHR33981:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G37570 : HSP20-like chaperones superfamily protein
RAP-DB (Rice) LOC_Os01g62300.1 : SLT1 protein, putative, expressed
MaizeGDB (Corn) Zm00025a052748 , Zm00025a001867 , Zm00025a026919
Brachypodium KQK22322 , KQK10508
Barley HORVU3Hr1G086480.3 , HORVU3Hr1G086480.1 , HORVU3Hr1G086480.7 , HORVU3Hr1G086480.6 , HORVU3Hr1G086480.5 , HORVU3Hr1G086480.4 , HORVU3Hr1G086480.9 , HORVU3Hr1G086480.8 , HORVU3Hr1G086480.13 , HORVU3Hr1G086480.12 , HORVU3Hr1G086480.11 , HORVU3Hr1G086480.10 , HORVU3Hr1G086480.17 , HORVU3Hr1G086480.16 , HORVU3Hr1G086480.15 , HORVU3Hr1G086480.14 , HORVU4Hr1G059250.1 , HORVU4Hr1G059250.3 , HORVU4Hr1G059250.2 , HORVU4Hr1G059250.5 , HORVU4Hr1G059250.4
Wheat -
Populus PNT22901 , PNT17747 , PNT17746


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cDNA sequences
Sobic.003G350800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G246300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CGMC_MAPKCMGC_2.4 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
2 Sobic.001G333600 membrane-anchored ubiquitin-fold protein, putative, expressed -
3 Sobic.010G251300 OsSBeL1 - Putative Serine Beta-Lactamase homologue, expressed K08869: ADCK, aarF domain-containing kinase
4 Sobic.003G043300 early fruit mRNA, putative, expressed -
5 Sobic.002G358800 interferon-related developmental regulator, putative, expressed -
6 Sobic.001G221800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@non-lysosomal glucosylceramidase, putative, expressed K17108: non-lysosomal glucosylceramidase
7 Sobic.002G290400 Protein kinase superfamily protein(PubMedID : 26465154)@serine/threonine-protein kinase SRPK1, putative, expressed -
8 Sobic.010G230500 expressed protein -
9 Sobic.008G077500 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed -
10 Sobic.008G047400 OsFBT14 - F-box and tubby domain containing protein, expressed -
11 Sobic.004G103000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@spotted leaf 11, putative, expressed -
12 Sobic.009G135900 cysteine proteinase inhibitor precursor protein, putative, expressed -
13 Sobic.003G139500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CDPK - CBL-interacting protein kinase 1(PubMedID : 31721651)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.9 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07198: PRKAA, 5'-AMP-activated protein kinase, catalytic alpha subunit
14 Sobic.001G352400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.010G074300 smr domain containing protein, expressed -
16 Sobic.001G244700 RIO1 family protein, expressed K08851: TP53RK, PRPK, TP53 regulating kinase and related kinases
17 Sobic.003G339700 Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.12 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
18 Sobic.001G406100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@mitochondrial carrier protein, putative, expressed K15100: SLC25A1, solute carrier family 25 (mitochondrial citrate transporter), member 1
19 Sobic.004G322700 - -
20 Sobic.003G373600 -(PubMedID : 26976818)@serine hydroxymethyltransferase, mitochondrial precursor, putative, expressed K00600: glyA, glycine hydroxymethyltransferase


Gene co-expression network
sample Sobic003G350800 Sobic003G350800 Sobic009G246300 Sobic009G246300 Sobic003G350800--Sobic009G246300 Sobic001G333600 Sobic001G333600 Sobic003G350800--Sobic001G333600 Sobic010G251300 Sobic010G251300 Sobic003G350800--Sobic010G251300 Sobic003G043300 Sobic003G043300 Sobic003G350800--Sobic003G043300 Sobic002G358800 Sobic002G358800 Sobic003G350800--Sobic002G358800 Sobic001G221800 Sobic001G221800 Sobic003G350800--Sobic001G221800 Sobic002G290400 Sobic002G290400 Sobic003G350800--Sobic002G290400 Sobic010G230500 Sobic010G230500 Sobic003G350800--Sobic010G230500 Sobic008G077500 Sobic008G077500 Sobic003G350800--Sobic008G077500 Sobic004G322700 Sobic004G322700 Sobic009G246300--Sobic004G322700 Sobic009G246300--Sobic001G221800 Sobic003G139500 Sobic003G139500 Sobic009G246300--Sobic003G139500 Sobic003G277600 Sobic003G277600 Sobic009G246300--Sobic003G277600 Sobic004G322600 Sobic004G322600 Sobic009G246300--Sobic004G322600 Sobic009G016000 Sobic009G016000 Sobic009G246300--Sobic009G016000 Sobic001G073300 Sobic001G073300 Sobic009G246300--Sobic001G073300 Sobic001G244600 Sobic001G244600 Sobic009G246300--Sobic001G244600 Sobic001G244700 Sobic001G244700 Sobic009G246300--Sobic001G244700 Sobic001G333600--Sobic002G358800 Sobic001G333600--Sobic003G350800 Sobic008G047400 Sobic008G047400 Sobic001G333600--Sobic008G047400 Sobic001G333600--Sobic010G251300 Sobic009G200800 Sobic009G200800 Sobic001G333600--Sobic009G200800 Sobic009G231200 Sobic009G231200 Sobic001G333600--Sobic009G231200 Sobic009G066900 Sobic009G066900 Sobic001G333600--Sobic009G066900 Sobic002G217700 Sobic002G217700 Sobic001G333600--Sobic002G217700 Sobic003G309200 Sobic003G309200 Sobic001G333600--Sobic003G309200 Sobic010G251300--Sobic002G290400 Sobic010G251300--Sobic009G200800 Sobic010G251300--Sobic003G043300 Sobic001G064200 Sobic001G064200 Sobic010G251300--Sobic001G064200 Sobic002G383600 Sobic002G383600 Sobic010G251300--Sobic002G383600 Sobic010G251300--Sobic003G350800 Sobic007G146400 Sobic007G146400 Sobic010G251300--Sobic007G146400 Sobic010G251300--Sobic001G333600 Sobic001G057700 Sobic001G057700 Sobic010G251300--Sobic001G057700 Sobic003G220800 Sobic003G220800 Sobic003G043300--Sobic003G220800 Sobic010G074300 Sobic010G074300 Sobic003G043300--Sobic010G074300 Sobic006G175800 Sobic006G175800 Sobic003G043300--Sobic006G175800 Sobic003G043300--Sobic010G251300 Sobic001G136800 Sobic001G136800 Sobic003G043300--Sobic001G136800 Sobic001G257700 Sobic001G257700 Sobic003G043300--Sobic001G257700 Sobic003G043300--Sobic008G077500 Sobic004G040900 Sobic004G040900 Sobic003G043300--Sobic004G040900 Sobic003G051000 Sobic003G051000 Sobic003G043300--Sobic003G051000 Sobic002G358800--Sobic001G333600 Sobic001G328200 Sobic001G328200 Sobic002G358800--Sobic001G328200 Sobic002G358800--Sobic002G217700 Sobic009G258100 Sobic009G258100 Sobic002G358800--Sobic009G258100 Sobic002G358800--Sobic010G230500 Sobic002G358800--Sobic003G350800 Sobic001G031600 Sobic001G031600 Sobic002G358800--Sobic001G031600 Sobic002G358400 Sobic002G358400 Sobic002G358800--Sobic002G358400 Sobic006G092400 Sobic006G092400 Sobic002G358800--Sobic006G092400 Sobic003G355200 Sobic003G355200 Sobic001G221800--Sobic003G355200 Sobic001G221800--Sobic009G246300 Sobic001G221800--Sobic001G244700 Sobic001G221800--Sobic004G322700 Sobic006G214300 Sobic006G214300 Sobic001G221800--Sobic006G214300 Sobic010G059000 Sobic010G059000 Sobic001G221800--Sobic010G059000 Sobic003G282000 Sobic003G282000 Sobic001G221800--Sobic003G282000 Sobic001G221800--Sobic004G322600 Sobic001G221800--Sobic003G139500 Sobic006G209400 Sobic006G209400 Sobic002G290400--Sobic006G209400 Sobic003G076500 Sobic003G076500 Sobic002G290400--Sobic003G076500 Sobic002G290400--Sobic010G251300 Sobic002G290400--Sobic003G309200 Sobic001G414500 Sobic001G414500 Sobic002G290400--Sobic001G414500 Sobic008G089900 Sobic008G089900 Sobic002G290400--Sobic008G089900 Sobic002G290400--Sobic006G092400 Sobic004G118200 Sobic004G118200 Sobic002G290400--Sobic004G118200 Sobic002G290400--Sobic010G230500 Sobic010G230500--Sobic010G074300 Sobic003G295900 Sobic003G295900 Sobic010G230500--Sobic003G295900 Sobic004G189200 Sobic004G189200 Sobic010G230500--Sobic004G189200 Sobic010G230500--Sobic008G089900 Sobic004G103000 Sobic004G103000 Sobic010G230500--Sobic004G103000 Sobic010G230500--Sobic002G358800 Sobic010G230500--Sobic008G077500 Sobic007G090900 Sobic007G090900 Sobic010G230500--Sobic007G090900 Sobic010G230500--Sobic002G290400 Sobic008G077500--Sobic007G090900 Sobic004G268300 Sobic004G268300 Sobic008G077500--Sobic004G268300 Sobic001G243200 Sobic001G243200 Sobic008G077500--Sobic001G243200 Sobic008G052900 Sobic008G052900 Sobic008G077500--Sobic008G052900 Sobic009G103000 Sobic009G103000 Sobic008G077500--Sobic009G103000 Sobic006G212800 Sobic006G212800 Sobic008G077500--Sobic006G212800 Sobic003G157900 Sobic003G157900 Sobic008G077500--Sobic003G157900 Sobic003G260100 Sobic003G260100 Sobic008G077500--Sobic003G260100 Sobic002G162400 Sobic002G162400 Sobic008G077500--Sobic002G162400
Octagon: transcription factors


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