Gene annotation
Transcriptome id Sobic.009G135900.1
Synonym CYSB, Sb09g020170, ATCYSB, ATCYS6
Functional annotation cysteine proteinase inhibitor precursor protein, putative, expressed
UniProt C5YXT0
Pfam PF16845
Panther DB PTHR11413 PTHR11413:SF62
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0004869; cysteine-type endopeptidase inhibitor activity


Orthologs (automatic annotation)
TAIR AT3G12490 : cystatin B
RAP-DB (Rice) LOC_Os05g33880.1 : cysteine proteinase inhibitor precursor protein, putative, expressed
MaizeGDB (Corn) Zm00025a043676 , Zm00025a037450
Brachypodium -
Barley HORVU1Hr1G063320.1 , HORVU1Hr1G063320.3 , HORVU1Hr1G063320.5 , HORVU1Hr1G063320.4 , HORVU1Hr1G063320.6
Wheat TraesCS1A02G256400 , TraesCS1B02G267100 , TraesCS1D02G255800 , TraesCS1A02G256400
Populus -


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cDNA sequences
Sobic.009G135900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G058200 cytidylyltransferase domain containing protein, expressed K00968: choline-phosphate cytidylyltransferase
2 Sobic.004G255700 sucrase-related, putative, expressed -
3 Sobic.005G033200 expressed protein -
4 Sobic.003G350800 SLT1 protein, putative, expressed -
5 Sobic.009G217900 expressed protein K06875: PDCD5, programmed cell death protein 5
6 Sobic.009G219900 peptidyl-tRNA hydrolase, mitochondrial precursor protein, putative, expressed K01056: PTH1, pth, peptidyl-tRNA hydrolase, PTH1 family
7 Sobic.004G247000 -(PubMedID : 26976818)@"Gln-4(Ortholog in maize:Martin et al., 2006)"(PubMedID : 31659887)@glutamine synthetase, catalytic domain containing protein, expressed K01915: glnA, glutamine synthetase
8 Sobic.003G369500 NPL4, putative, expressed K14015: NPLOC4, nuclear protein localization protein 4 homolog
9 Sobic.001G328200 interferon-related developmental regulator, putative, expressed -
10 Sobic.004G133400 eukaryotic translation initiation factor 1A, putative, expressed K03236: translation initiation factor 1A
11 Sobic.001G301800 CS domain containing protein, putative, expressed -
12 Sobic.001G082000 zinc finger family protein, putative, expressed K06874: zinc finger protein
13 Sobic.002G358800 interferon-related developmental regulator, putative, expressed -
14 Sobic.003G243600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ubiquitin-conjugating enzyme, putative, expressed K06689: UBE2D, UBC4, ubiquitin-conjugating enzyme E2 D
15 Sobic.010G019300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydrolase, NUDIX family, domain containing protein, expressed K18447: ADP-sugar diphosphatase
16 Sobic.001G070000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@actin-depolymerizing factor, putative, expressed K05765: cofilin
17 Sobic.005G026100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydroxymethylglutaryl-CoA lyase, putative, expressed K01640: E4.1.3.4, HMGCL, hydroxymethylglutaryl-CoA lyase
18 Sobic.010G267500 bZIP orthologous(PubMedID : 28671251)@E2F-related protein, putative, expressed -
19 Sobic.001G417900 RNA recognition motif containing protein, putative, expressed K12881: THOC4, THO complex subunit 4
20 Sobic.002G343300 zinc finger family protein, putative, expressed -


Gene co-expression network
sample Sobic009G135900 Sobic009G135900 Sobic004G058200 Sobic004G058200 Sobic009G135900--Sobic004G058200 Sobic004G255700 Sobic004G255700 Sobic009G135900--Sobic004G255700 Sobic005G033200 Sobic005G033200 Sobic009G135900--Sobic005G033200 Sobic003G350800 Sobic003G350800 Sobic009G135900--Sobic003G350800 Sobic009G217900 Sobic009G217900 Sobic009G135900--Sobic009G217900 Sobic009G219900 Sobic009G219900 Sobic009G135900--Sobic009G219900 Sobic004G247000 Sobic004G247000 Sobic009G135900--Sobic004G247000 Sobic003G369500 Sobic003G369500 Sobic009G135900--Sobic003G369500 Sobic001G328200 Sobic001G328200 Sobic009G135900--Sobic001G328200 Sobic010G188100 Sobic010G188100 Sobic004G058200--Sobic010G188100 Sobic004G058200--Sobic009G135900 Sobic007G114200 Sobic007G114200 Sobic004G058200--Sobic007G114200 Sobic001G358300 Sobic001G358300 Sobic004G058200--Sobic001G358300 Sobic004G058200--Sobic009G217900 Sobic002G363100 Sobic002G363100 Sobic004G058200--Sobic002G363100 Sobic001G301800 Sobic001G301800 Sobic004G058200--Sobic001G301800 Sobic003G395100 Sobic003G395100 Sobic004G058200--Sobic003G395100 Sobic004G058200--Sobic001G328200 Sobic008G047400 Sobic008G047400 Sobic004G255700--Sobic008G047400 Sobic002G343300 Sobic002G343300 Sobic004G255700--Sobic002G343300 Sobic001G193300 Sobic001G193300 Sobic004G255700--Sobic001G193300 Sobic004G255700--Sobic009G135900 Sobic001G446200 Sobic001G446200 Sobic004G255700--Sobic001G446200 Sobic006G033200 Sobic006G033200 Sobic004G255700--Sobic006G033200 Sobic004G202500 Sobic004G202500 Sobic004G255700--Sobic004G202500 Sobic006G034500 Sobic006G034500 Sobic004G255700--Sobic006G034500 Sobic004G255700--Sobic009G219900 Sobic003G264200 Sobic003G264200 Sobic005G033200--Sobic003G264200 Sobic001G314500 Sobic001G314500 Sobic005G033200--Sobic001G314500 Sobic001G428100 Sobic001G428100 Sobic005G033200--Sobic001G428100 Sobic004G130100 Sobic004G130100 Sobic005G033200--Sobic004G130100 Sobic005G111900 Sobic005G111900 Sobic005G033200--Sobic005G111900 Sobic003G349300 Sobic003G349300 Sobic005G033200--Sobic003G349300 Sobic005G033200--Sobic009G217900 Sobic003G440800 Sobic003G440800 Sobic005G033200--Sobic003G440800 Sobic006G049700 Sobic006G049700 Sobic005G033200--Sobic006G049700 Sobic009G246300 Sobic009G246300 Sobic003G350800--Sobic009G246300 Sobic001G333600 Sobic001G333600 Sobic003G350800--Sobic001G333600 Sobic010G251300 Sobic010G251300 Sobic003G350800--Sobic010G251300 Sobic003G043300 Sobic003G043300 Sobic003G350800--Sobic003G043300 Sobic002G358800 Sobic002G358800 Sobic003G350800--Sobic002G358800 Sobic001G221800 Sobic001G221800 Sobic003G350800--Sobic001G221800 Sobic002G290400 Sobic002G290400 Sobic003G350800--Sobic002G290400 Sobic010G230500 Sobic010G230500 Sobic003G350800--Sobic010G230500 Sobic008G077500 Sobic008G077500 Sobic003G350800--Sobic008G077500 Sobic009G217900--Sobic004G130100 Sobic009G217900--Sobic002G363100 Sobic001G501200 Sobic001G501200 Sobic009G217900--Sobic001G501200 Sobic010G205300 Sobic010G205300 Sobic009G217900--Sobic010G205300 Sobic009G217900--Sobic005G033200 Sobic010G042100 Sobic010G042100 Sobic009G217900--Sobic010G042100 Sobic009G217900--Sobic001G314500 Sobic009G217900--Sobic003G440800 Sobic009G198500 Sobic009G198500 Sobic009G217900--Sobic009G198500 Sobic009G219900--Sobic010G188100 Sobic001G220400 Sobic001G220400 Sobic009G219900--Sobic001G220400 Sobic003G077900 Sobic003G077900 Sobic009G219900--Sobic003G077900 Sobic001G541100 Sobic001G541100 Sobic009G219900--Sobic001G541100 Sobic009G219900--Sobic001G328200 Sobic006G225600 Sobic006G225600 Sobic009G219900--Sobic006G225600 Sobic010G101500 Sobic010G101500 Sobic009G219900--Sobic010G101500 Sobic001G414500 Sobic001G414500 Sobic009G219900--Sobic001G414500 Sobic002G431600 Sobic002G431600 Sobic009G219900--Sobic002G431600 Sobic004G247000--Sobic003G077900 Sobic004G247000--Sobic001G541100 Sobic009G005900 Sobic009G005900 Sobic004G247000--Sobic009G005900 Sobic003G076500 Sobic003G076500 Sobic004G247000--Sobic003G076500 Sobic004G247000--Sobic009G135900 Sobic001G070000 Sobic001G070000 Sobic004G247000--Sobic001G070000 Sobic002G400000 Sobic002G400000 Sobic004G247000--Sobic002G400000 Sobic004G247000--Sobic010G205300 Sobic004G181900 Sobic004G181900 Sobic004G247000--Sobic004G181900 Sobic004G060600 Sobic004G060600 Sobic003G369500--Sobic004G060600 Sobic003G369500--Sobic003G077900 Sobic009G131100 Sobic009G131100 Sobic003G369500--Sobic009G131100 Sobic001G428200 Sobic001G428200 Sobic003G369500--Sobic001G428200 Sobic007G091000 Sobic007G091000 Sobic003G369500--Sobic007G091000 Sobic003G369500--Sobic001G428100 Sobic007G044300 Sobic007G044300 Sobic003G369500--Sobic007G044300 Sobic010G267500 Sobic010G267500 Sobic003G369500--Sobic010G267500 Sobic003G277000 Sobic003G277000 Sobic003G369500--Sobic003G277000 Sobic001G328200--Sobic010G188100 Sobic001G328200--Sobic009G219900 Sobic006G092400 Sobic006G092400 Sobic001G328200--Sobic006G092400 Sobic001G328200--Sobic010G101500 Sobic003G002400 Sobic003G002400 Sobic001G328200--Sobic003G002400 Sobic003G312200 Sobic003G312200 Sobic001G328200--Sobic003G312200 Sobic001G328200--Sobic002G358800 Sobic007G139700 Sobic007G139700 Sobic001G328200--Sobic007G139700 Sobic002G166900 Sobic002G166900 Sobic001G328200--Sobic002G166900
Octagon: transcription factors


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