Gene annotation
Transcriptome id Sobic.001G301800.1
Synonym Sb01g029360
Functional annotation CS domain containing protein, putative, expressed
UniProt C5WSG2
Pfam PF04969
Panther DB PTHR12356 PTHR12356:SF18
NCBI CDD KOG2265; Nuclear distribution protein NUDC
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G58740 : HSP20-like chaperones superfamily protein
RAP-DB (Rice) LOC_Os01g47770.1 : CS domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a019133 , Zm00025a015334
Brachypodium KQJ82203
Barley HORVU2Hr1G068470.3 , HORVU2Hr1G068470.2 , HORVU2Hr1G068470.1
Wheat TraesCS2A02G279900 , TraesCS2A02G279900 , TraesCS2D02G278900 , TraesCS2B02G296900 , TraesCS2B02G296900
Populus -


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cDNA sequences
Sobic.001G301800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G017800 glutathione S-transferase, N-terminal domain containing protein, expressed -
2 Sobic.004G058200 cytidylyltransferase domain containing protein, expressed K00968: choline-phosphate cytidylyltransferase
3 Sobic.009G217900 expressed protein K06875: PDCD5, programmed cell death protein 5
4 Sobic.009G135900 cysteine proteinase inhibitor precursor protein, putative, expressed -
5 Sobic.010G027000 enolase, putative, expressed K01689: ENO, enolase
6 Sobic.010G026925 - K01689: ENO, enolase
7 Sobic.005G033200 expressed protein -
8 Sobic.003G336000 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, putative, expressed K15633: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
9 Sobic.010G019300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydrolase, NUDIX family, domain containing protein, expressed K18447: ADP-sugar diphosphatase
10 Sobic.002G358400 eukaryotic peptide chain release factor subunit 1-1, putative, expressed K03265: ETF1, peptide chain release factor subunit 1
11 Sobic.003G316700 katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed K18643: katanin p80 WD40 repeat-containing subunit B1
12 Sobic.001G357300 cystathionine gamma-synthase, putative, expressed K01739: cystathionine gamma-synthase
13 Sobic.001G496300 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase protein, putative, expressed K08967: mtnD, mtnZ, 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase
14 Sobic.006G271500 phosphomannomutase, putative, expressed K17497: phosphomannomutase
15 Sobic.006G261700 DJ-1 family protein, putative, expressed K18881: D-lactate dehydratase
16 Sobic.004G130100 ubiquitin-conjugating enzyme, putative, expressed K10704: ubiquitin-conjugating enzyme E2 variant
17 Sobic.009G207300 ubiquitin domain-containing protein 1, putative, expressed -
18 Sobic.007G033800 basic helix-loop-helix DND-binding domain containing protein, expressed -
19 Sobic.004G133400 eukaryotic translation initiation factor 1A, putative, expressed K03236: translation initiation factor 1A
20 Sobic.002G431100 OsAPx2 - Cytosolic Ascorbate Peroxidase encoding gene 4,5,6,8, expressed K00434: L-ascorbate peroxidase


Gene co-expression network
sample Sobic001G301800 Sobic001G301800 Sobic009G017800 Sobic009G017800 Sobic001G301800--Sobic009G017800 Sobic004G058200 Sobic004G058200 Sobic001G301800--Sobic004G058200 Sobic009G217900 Sobic009G217900 Sobic001G301800--Sobic009G217900 Sobic009G135900 Sobic009G135900 Sobic001G301800--Sobic009G135900 Sobic010G027000 Sobic010G027000 Sobic001G301800--Sobic010G027000 Sobic010G026925 Sobic010G026925 Sobic001G301800--Sobic010G026925 Sobic005G033200 Sobic005G033200 Sobic001G301800--Sobic005G033200 Sobic003G336000 Sobic003G336000 Sobic001G301800--Sobic003G336000 Sobic010G019300 Sobic010G019300 Sobic001G301800--Sobic010G019300 Sobic009G015700 Sobic009G015700 Sobic009G017800--Sobic009G015700 Sobic009G017800--Sobic001G301800 Sobic001G496300 Sobic001G496300 Sobic009G017800--Sobic001G496300 Sobic001G020100 Sobic001G020100 Sobic009G017800--Sobic001G020100 Sobic001G447600 Sobic001G447600 Sobic009G017800--Sobic001G447600 Sobic006G097200 Sobic006G097200 Sobic009G017800--Sobic006G097200 Sobic003G380600 Sobic003G380600 Sobic009G017800--Sobic003G380600 Sobic009G017800--Sobic010G026925 Sobic001G407600 Sobic001G407600 Sobic009G017800--Sobic001G407600 Sobic010G188100 Sobic010G188100 Sobic004G058200--Sobic010G188100 Sobic004G058200--Sobic009G135900 Sobic007G114200 Sobic007G114200 Sobic004G058200--Sobic007G114200 Sobic001G358300 Sobic001G358300 Sobic004G058200--Sobic001G358300 Sobic004G058200--Sobic009G217900 Sobic002G363100 Sobic002G363100 Sobic004G058200--Sobic002G363100 Sobic004G058200--Sobic001G301800 Sobic003G395100 Sobic003G395100 Sobic004G058200--Sobic003G395100 Sobic001G328200 Sobic001G328200 Sobic004G058200--Sobic001G328200 Sobic004G130100 Sobic004G130100 Sobic009G217900--Sobic004G130100 Sobic009G217900--Sobic002G363100 Sobic001G501200 Sobic001G501200 Sobic009G217900--Sobic001G501200 Sobic010G205300 Sobic010G205300 Sobic009G217900--Sobic010G205300 Sobic009G217900--Sobic005G033200 Sobic010G042100 Sobic010G042100 Sobic009G217900--Sobic010G042100 Sobic001G314500 Sobic001G314500 Sobic009G217900--Sobic001G314500 Sobic003G440800 Sobic003G440800 Sobic009G217900--Sobic003G440800 Sobic009G198500 Sobic009G198500 Sobic009G217900--Sobic009G198500 Sobic009G135900--Sobic004G058200 Sobic004G255700 Sobic004G255700 Sobic009G135900--Sobic004G255700 Sobic009G135900--Sobic005G033200 Sobic003G350800 Sobic003G350800 Sobic009G135900--Sobic003G350800 Sobic009G135900--Sobic009G217900 Sobic009G219900 Sobic009G219900 Sobic009G135900--Sobic009G219900 Sobic004G247000 Sobic004G247000 Sobic009G135900--Sobic004G247000 Sobic003G369500 Sobic003G369500 Sobic009G135900--Sobic003G369500 Sobic009G135900--Sobic001G328200 Sobic010G027000--Sobic003G336000 Sobic002G291200 Sobic002G291200 Sobic010G027000--Sobic002G291200 Sobic010G277800 Sobic010G277800 Sobic010G027000--Sobic010G277800 Sobic010G027000--Sobic009G217900 Sobic002G358800 Sobic002G358800 Sobic010G027000--Sobic002G358800 Sobic010G027000--Sobic004G058200 Sobic003G243600 Sobic003G243600 Sobic010G027000--Sobic003G243600 Sobic001G406100 Sobic001G406100 Sobic010G027000--Sobic001G406100 Sobic002G358400 Sobic002G358400 Sobic010G027000--Sobic002G358400 Sobic010G026925--Sobic003G336000 Sobic010G026925--Sobic005G033200 Sobic006G276700 Sobic006G276700 Sobic010G026925--Sobic006G276700 Sobic010G026925--Sobic001G301800 Sobic001G290700 Sobic001G290700 Sobic010G026925--Sobic001G290700 Sobic006G178000 Sobic006G178000 Sobic010G026925--Sobic006G178000 Sobic003G216500 Sobic003G216500 Sobic010G026925--Sobic003G216500 Sobic010G026925--Sobic010G027000 Sobic010G026925--Sobic009G017800 Sobic003G264200 Sobic003G264200 Sobic005G033200--Sobic003G264200 Sobic005G033200--Sobic001G314500 Sobic001G428100 Sobic001G428100 Sobic005G033200--Sobic001G428100 Sobic005G033200--Sobic004G130100 Sobic005G111900 Sobic005G111900 Sobic005G033200--Sobic005G111900 Sobic003G349300 Sobic003G349300 Sobic005G033200--Sobic003G349300 Sobic005G033200--Sobic009G217900 Sobic005G033200--Sobic003G440800 Sobic006G049700 Sobic006G049700 Sobic005G033200--Sobic006G049700 Sobic003G336000--Sobic010G027000 Sobic002G355300 Sobic002G355300 Sobic003G336000--Sobic002G355300 Sobic001G503500 Sobic001G503500 Sobic003G336000--Sobic001G503500 Sobic003G336000--Sobic009G217900 Sobic003G336000--Sobic004G058200 Sobic003G336000--Sobic010G026925 Sobic003G336000--Sobic007G114200 Sobic004G352500 Sobic004G352500 Sobic003G336000--Sobic004G352500 Sobic003G336000--Sobic001G301800 Sobic001G357300 Sobic001G357300 Sobic010G019300--Sobic001G357300 Sobic003G410100 Sobic003G410100 Sobic010G019300--Sobic003G410100 Sobic010G019300--Sobic009G135900 Sobic010G019300--Sobic001G301800 Sobic010G019300--Sobic001G407600 Sobic002G339600 Sobic002G339600 Sobic010G019300--Sobic002G339600 Sobic005G026100 Sobic005G026100 Sobic010G019300--Sobic005G026100 Sobic001G339500 Sobic001G339500 Sobic010G019300--Sobic001G339500 Sobic010G019300--Sobic003G369500
Octagon: transcription factors


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