Gene annotation
Transcriptome id Sobic.006G271500.1
Synonym Sb06g033280, PMM, ATPMM
Functional annotation phosphomannomutase, putative, expressed
UniProt C5YAM6
Pfam PF08282
Panther DB PTHR10466
NCBI CDD KOG3189; Phosphomannomutase
KEGG Orthology K17497; phosphomannomutase
Gene Ontology GO:0009298; GDP-mannose biosynthetic process GO:0005737cytoplasm GO:0004615phosphomannomutase activity


Orthologs (automatic annotation)
TAIR AT2G45790 : phosphomannomutase
RAP-DB (Rice) LOC_Os04g58580.1 : phosphomannomutase, putative, expressed
MaizeGDB (Corn) Zm00025a009252
Brachypodium KQJ85349
Barley HORVU2Hr1G122950.1 , HORVU2Hr1G122950.3 , HORVU2Hr1G122950.2
Wheat TraesCS2B02G599300 , TraesCS2D02G593400 , TraesCS7D02G085300 , TraesCS7A02G089800 , TraesCSU02G037500 , TraesCS4A02G062700 , TraesCS4A02G062700 , TraesCS4B02G239500 , TraesCS4A02G389300
Populus -


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cDNA sequences
Sobic.006G271500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G230600 glucose-6-phosphate isomerase, putative, expressed K01810: GPI, glucose-6-phosphate isomerase
2 Sobic.002G128900 thioesterase family protein, putative, expressed -
3 Sobic.004G238100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09874: aquaporin NIP
4 Sobic.009G155300 solute carrier family 35 member F2, putative, expressed K15287: solute carrier family 35, member F1/2
5 Sobic.004G121300 ATP11 protein, expressed K07555: ATPeAF1, ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1
6 Sobic.001G261545 - K01669: deoxyribodipyrimidine photo-lyase
7 Sobic.010G050800 OsPOP11 - Putative Prolyl Oligopeptidase homologue, expressed -
8 Sobic.001G085600 ABC transporter, ATP-binding protein, putative, expressed -
9 Sobic.008G037800 ACT domain containing protein, expressed -
10 Sobic.006G259700 methylthioribose kinase, putative, expressed K00899: 5-methylthioribose kinase
11 Sobic.009G003000 methionine S-methyltransferase, putative, expressed K08247: methionine S-methyltransferase
12 Sobic.008G004300 outer membrane protein, OMP85 family, putative, expressed K07277: SAM50, TOB55, outer membrane protein insertion porin family
13 Sobic.004G283700 OsFBX58 - F-box domain containing protein, expressed -
14 Sobic.009G162600 OsFtsH8 FtsH protease, homologue of AtFtsH3/10, expressed K08956: AFG3 family protein
15 Sobic.001G462200 mannose-1-phosphate guanyltransferase, putative, expressed K00966: mannose-1-phosphate guanylyltransferase
16 Sobic.005G061801 - -
17 Sobic.003G264200 Ser/Thr protein phosphatase family protein, putative, expressed K15498: serine/threonine-protein phosphatase 6 catalytic subunit
18 Sobic.002G431100 OsAPx2 - Cytosolic Ascorbate Peroxidase encoding gene 4,5,6,8, expressed K00434: L-ascorbate peroxidase
19 Sobic.001G301800 CS domain containing protein, putative, expressed -
20 Sobic.001G203400 phosphatidylinositol-4-phosphate 5-kinase, putative, expressed K00889: 1-phosphatidylinositol-4-phosphate 5-kinase


Gene co-expression network
sample Sobic006G271500 Sobic006G271500 Sobic002G230600 Sobic002G230600 Sobic006G271500--Sobic002G230600 Sobic002G128900 Sobic002G128900 Sobic006G271500--Sobic002G128900 Sobic004G238100 Sobic004G238100 Sobic006G271500--Sobic004G238100 Sobic009G155300 Sobic009G155300 Sobic006G271500--Sobic009G155300 Sobic004G121300 Sobic004G121300 Sobic006G271500--Sobic004G121300 Sobic001G261545 Sobic001G261545 Sobic006G271500--Sobic001G261545 Sobic010G050800 Sobic010G050800 Sobic006G271500--Sobic010G050800 Sobic001G085600 Sobic001G085600 Sobic006G271500--Sobic001G085600 Sobic008G037800 Sobic008G037800 Sobic006G271500--Sobic008G037800 Sobic010G062500 Sobic010G062500 Sobic002G230600--Sobic010G062500 Sobic004G113100 Sobic004G113100 Sobic002G230600--Sobic004G113100 Sobic002G230600--Sobic008G037800 Sobic001G167900 Sobic001G167900 Sobic002G230600--Sobic001G167900 Sobic004G124400 Sobic004G124400 Sobic002G230600--Sobic004G124400 Sobic004G154800 Sobic004G154800 Sobic002G230600--Sobic004G154800 Sobic006G265900 Sobic006G265900 Sobic002G230600--Sobic006G265900 Sobic002G351600 Sobic002G351600 Sobic002G230600--Sobic002G351600 Sobic004G305900 Sobic004G305900 Sobic002G230600--Sobic004G305900 Sobic010G140600 Sobic010G140600 Sobic002G128900--Sobic010G140600 Sobic002G279700 Sobic002G279700 Sobic002G128900--Sobic002G279700 Sobic001G295300 Sobic001G295300 Sobic002G128900--Sobic001G295300 Sobic002G200900 Sobic002G200900 Sobic002G128900--Sobic002G200900 Sobic004G281900 Sobic004G281900 Sobic002G128900--Sobic004G281900 Sobic002G072400 Sobic002G072400 Sobic002G128900--Sobic002G072400 Sobic008G096800 Sobic008G096800 Sobic002G128900--Sobic008G096800 Sobic010G269400 Sobic010G269400 Sobic002G128900--Sobic010G269400 Sobic008G144800 Sobic008G144800 Sobic002G128900--Sobic008G144800 Sobic001G142800 Sobic001G142800 Sobic004G238100--Sobic001G142800 Sobic005G091300 Sobic005G091300 Sobic004G238100--Sobic005G091300 Sobic009G003000 Sobic009G003000 Sobic004G238100--Sobic009G003000 Sobic004G238100--Sobic006G271500 Sobic008G119800 Sobic008G119800 Sobic004G238100--Sobic008G119800 Sobic009G246300 Sobic009G246300 Sobic004G238100--Sobic009G246300 Sobic006G259700 Sobic006G259700 Sobic004G238100--Sobic006G259700 Sobic004G238100--Sobic004G113100 Sobic009G176800 Sobic009G176800 Sobic004G238100--Sobic009G176800 Sobic009G155300--Sobic006G271500 Sobic009G155300--Sobic002G128900 Sobic009G207300 Sobic009G207300 Sobic009G155300--Sobic009G207300 Sobic009G155300--Sobic004G113100 Sobic010G049100 Sobic010G049100 Sobic009G155300--Sobic010G049100 Sobic009G155300--Sobic004G121300 Sobic009G155300--Sobic002G230600 Sobic001G048200 Sobic001G048200 Sobic009G155300--Sobic001G048200 Sobic009G155300--Sobic002G279700 Sobic001G014800 Sobic001G014800 Sobic004G121300--Sobic001G014800 Sobic004G121300--Sobic010G049100 Sobic001G333100 Sobic001G333100 Sobic004G121300--Sobic001G333100 Sobic001G434200 Sobic001G434200 Sobic004G121300--Sobic001G434200 Sobic008G033500 Sobic008G033500 Sobic004G121300--Sobic008G033500 Sobic002G131500 Sobic002G131500 Sobic004G121300--Sobic002G131500 Sobic006G274800 Sobic006G274800 Sobic004G121300--Sobic006G274800 Sobic005G111900 Sobic005G111900 Sobic004G121300--Sobic005G111900 Sobic010G131900 Sobic010G131900 Sobic004G121300--Sobic010G131900 Sobic007G136200 Sobic007G136200 Sobic001G261545--Sobic007G136200 Sobic010G171600 Sobic010G171600 Sobic001G261545--Sobic010G171600 Sobic005G100600 Sobic005G100600 Sobic001G261545--Sobic005G100600 Sobic009G103000 Sobic009G103000 Sobic001G261545--Sobic009G103000 Sobic003G264800 Sobic003G264800 Sobic001G261545--Sobic003G264800 Sobic007G058001 Sobic007G058001 Sobic001G261545--Sobic007G058001 Sobic001G261545--Sobic001G085600 Sobic006G232600 Sobic006G232600 Sobic001G261545--Sobic006G232600 Sobic001G436400 Sobic001G436400 Sobic001G261545--Sobic001G436400 Sobic010G083500 Sobic010G083500 Sobic010G050800--Sobic010G083500 Sobic010G050800--Sobic006G271500 Sobic010G262433 Sobic010G262433 Sobic010G050800--Sobic010G262433 Sobic007G100425 Sobic007G100425 Sobic010G050800--Sobic007G100425 Sobic004G216400 Sobic004G216400 Sobic010G050800--Sobic004G216400 Sobic001G219300 Sobic001G219300 Sobic010G050800--Sobic001G219300 Sobic010G012800 Sobic010G012800 Sobic010G050800--Sobic010G012800 Sobic001G013500 Sobic001G013500 Sobic010G050800--Sobic001G013500 Sobic002G431100 Sobic002G431100 Sobic010G050800--Sobic002G431100 Sobic001G085600--Sobic005G100600 Sobic004G193700 Sobic004G193700 Sobic001G085600--Sobic004G193700 Sobic001G085600--Sobic001G261545 Sobic006G092000 Sobic006G092000 Sobic001G085600--Sobic006G092000 Sobic002G309900 Sobic002G309900 Sobic001G085600--Sobic002G309900 Sobic001G203400 Sobic001G203400 Sobic001G085600--Sobic001G203400 Sobic002G218500 Sobic002G218500 Sobic001G085600--Sobic002G218500 Sobic005G198000 Sobic005G198000 Sobic001G085600--Sobic005G198000 Sobic003G319800 Sobic003G319800 Sobic001G085600--Sobic003G319800 Sobic008G037800--Sobic002G072400 Sobic004G252500 Sobic004G252500 Sobic008G037800--Sobic004G252500 Sobic004G165900 Sobic004G165900 Sobic008G037800--Sobic004G165900 Sobic006G155500 Sobic006G155500 Sobic008G037800--Sobic006G155500 Sobic008G037800--Sobic010G062500 Sobic004G300100 Sobic004G300100 Sobic008G037800--Sobic004G300100 Sobic004G324100 Sobic004G324100 Sobic008G037800--Sobic004G324100 Sobic003G108900 Sobic003G108900 Sobic008G037800--Sobic003G108900 Sobic004G307100 Sobic004G307100 Sobic008G037800--Sobic004G307100
Octagon: transcription factors


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