Gene annotation
Transcriptome id Sobic.004G238100.1
Synonym NIP4, NLM5, Sb04g028020, 2
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
aquaporin protein, putative, expressed
UniProt A9XG44
Pfam PF00230
Panther DB PTHR19139:SF142 PTHR19139
NCBI CDD KOG0223; Aquaporin (major intrinsic protein family)
KEGG Orthology K09874; aquaporin NIP
Gene Ontology GO:0005215; transporter activity GO:0006810transport GO:0016020membrane


Orthologs (automatic annotation)
TAIR AT5G37820 : NOD26-like intrinsic protein 4;2
RAP-DB (Rice) LOC_Os02g51110.1 : aquaporin protein, putative, expressed
MaizeGDB (Corn) Zm00025a042597 , Zm00025a033207 , Zm00025a022031 , Zm00025a049470
Brachypodium KQJ95420 , KQK18873 , KQK18872 , KQK01944
Barley HORVU7Hr1G038270.1 , HORVU7Hr1G038270.3 , HORVU7Hr1G038270.2 , HORVU0Hr1G017130.2 , HORVU0Hr1G017130.3 , HORVU0Hr1G017130.1 , HORVU0Hr1G017130.4 , HORVU6Hr1G075850.13 , HORVU6Hr1G075850.12 , HORVU6Hr1G075850.11 , HORVU6Hr1G075850.10 , HORVU6Hr1G075850.9 , HORVU6Hr1G075850.8 , HORVU6Hr1G075850.7 , HORVU6Hr1G075850.6 , HORVU6Hr1G075850.5 , HORVU6Hr1G075850.4 , HORVU6Hr1G075850.3 , HORVU6Hr1G075850.2 , HORVU6Hr1G075850.1 , HORVU7Hr1G038220.10 , HORVU7Hr1G038220.11 , HORVU7Hr1G038220.12 , HORVU7Hr1G088900.1 , HORVU7Hr1G038220.6 , HORVU7Hr1G038220.7 , HORVU7Hr1G038220.4 , HORVU7Hr1G038220.5 , HORVU7Hr1G038220.2 , HORVU7Hr1G038220.3 , HORVU7Hr1G038220.1 , HORVU7Hr1G038220.8 , HORVU7Hr1G038220.9
Wheat TraesCS6D02G286400 , TraesCS7D02G188800 , TraesCS7D02G188800 , TraesCS7B02G272700 , TraesCS6A02G307300 , TraesCS7A02G187800 , TraesCS7B02G092900 , TraesCS6B02G335900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G142800 metal cation transporter, putative, expressed K14709: SLC39A1_2_3, solute carrier family 39 (zinc transporter), member 1/2/3
2 Sobic.005G091300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@receptor-like protein kinase 5 precursor, putative, expressed -
3 Sobic.009G003000 methionine S-methyltransferase, putative, expressed K08247: methionine S-methyltransferase
4 Sobic.006G271500 phosphomannomutase, putative, expressed K17497: phosphomannomutase
5 Sobic.008G119800 NB-ARC domain containing disease resistance protein, putative, expressed -
6 Sobic.009G246300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CGMC_MAPKCMGC_2.4 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
7 Sobic.006G259700 methylthioribose kinase, putative, expressed K00899: 5-methylthioribose kinase
8 Sobic.004G113100 "OsSPMS1(Ortholog in rice:Tao et al., 2018)"(PubMedID : 31659881)@spermidine synthase, putative, expressed K00797: speE, SRM, spermidine synthase
9 Sobic.009G176800 DUF567 domain containing protein, putative, expressed -
10 Sobic.002G252300 expressed protein -
11 Sobic.009G016000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 26976818)@soluble inorganic pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
12 Sobic.010G225701 - -
13 Sobic.003G373600 -(PubMedID : 26976818)@serine hydroxymethyltransferase, mitochondrial precursor, putative, expressed K00600: glyA, glycine hydroxymethyltransferase
14 Sobic.002G041200 similar to LOC Os02g20360: tyrosine aminotransferase(PubMedID : 24655390)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@similar to LOC.Os02g20360:tyrosine aminotranferase(PubMedID : 24655390)@tyrosine aminotransferase, putative, expressed K00815: tyrosine aminotransferase
15 Sobic.008G077500 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed -
16 Sobic.004G283700 OsFBX58 - F-box domain containing protein, expressed -
17 Sobic.001G357300 cystathionine gamma-synthase, putative, expressed K01739: cystathionine gamma-synthase
18 Sobic.003G101000 phosphate transporter 1, putative, expressed -
19 Sobic.009G155300 solute carrier family 35 member F2, putative, expressed K15287: solute carrier family 35, member F1/2
20 Sobic.010G019300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydrolase, NUDIX family, domain containing protein, expressed K18447: ADP-sugar diphosphatase


Gene co-expression network
sample Sobic004G238100 Sobic004G238100 Sobic001G142800 Sobic001G142800 Sobic004G238100--Sobic001G142800 Sobic005G091300 Sobic005G091300 Sobic004G238100--Sobic005G091300 Sobic009G003000 Sobic009G003000 Sobic004G238100--Sobic009G003000 Sobic006G271500 Sobic006G271500 Sobic004G238100--Sobic006G271500 Sobic008G119800 Sobic008G119800 Sobic004G238100--Sobic008G119800 Sobic009G246300 Sobic009G246300 Sobic004G238100--Sobic009G246300 Sobic006G259700 Sobic006G259700 Sobic004G238100--Sobic006G259700 Sobic004G113100 Sobic004G113100 Sobic004G238100--Sobic004G113100 Sobic009G176800 Sobic009G176800 Sobic004G238100--Sobic009G176800 Sobic002G041200 Sobic002G041200 Sobic001G142800--Sobic002G041200 Sobic001G142800--Sobic004G238100 Sobic001G142800--Sobic009G003000 Sobic002G041100 Sobic002G041100 Sobic001G142800--Sobic002G041100 Sobic001G142800--Sobic006G259700 Sobic003G134600 Sobic003G134600 Sobic001G142800--Sobic003G134600 Sobic001G142800--Sobic009G176800 Sobic006G024600 Sobic006G024600 Sobic001G142800--Sobic006G024600 Sobic010G225701 Sobic010G225701 Sobic001G142800--Sobic010G225701 Sobic001G073300 Sobic001G073300 Sobic005G091300--Sobic001G073300 Sobic007G140700 Sobic007G140700 Sobic005G091300--Sobic007G140700 Sobic002G306800 Sobic002G306800 Sobic005G091300--Sobic002G306800 Sobic001G244600 Sobic001G244600 Sobic005G091300--Sobic001G244600 Sobic001G483300 Sobic001G483300 Sobic005G091300--Sobic001G483300 Sobic002G162400 Sobic002G162400 Sobic005G091300--Sobic002G162400 Sobic003G409700 Sobic003G409700 Sobic005G091300--Sobic003G409700 Sobic006G235350 Sobic006G235350 Sobic005G091300--Sobic006G235350 Sobic002G183900 Sobic002G183900 Sobic005G091300--Sobic002G183900 Sobic009G003000--Sobic002G041200 Sobic009G003000--Sobic001G142800 Sobic009G003000--Sobic006G259700 Sobic009G003000--Sobic004G238100 Sobic009G003000--Sobic010G225701 Sobic009G003000--Sobic006G271500 Sobic009G003000--Sobic006G024600 Sobic009G003000--Sobic009G246300 Sobic001G261545 Sobic001G261545 Sobic009G003000--Sobic001G261545 Sobic002G230600 Sobic002G230600 Sobic006G271500--Sobic002G230600 Sobic002G128900 Sobic002G128900 Sobic006G271500--Sobic002G128900 Sobic006G271500--Sobic004G238100 Sobic009G155300 Sobic009G155300 Sobic006G271500--Sobic009G155300 Sobic004G121300 Sobic004G121300 Sobic006G271500--Sobic004G121300 Sobic006G271500--Sobic001G261545 Sobic010G050800 Sobic010G050800 Sobic006G271500--Sobic010G050800 Sobic001G085600 Sobic001G085600 Sobic006G271500--Sobic001G085600 Sobic008G037800 Sobic008G037800 Sobic006G271500--Sobic008G037800 Sobic008G119800--Sobic010G225701 Sobic001G411400 Sobic001G411400 Sobic008G119800--Sobic001G411400 Sobic007G135800 Sobic007G135800 Sobic008G119800--Sobic007G135800 Sobic001G509200 Sobic001G509200 Sobic008G119800--Sobic001G509200 Sobic008G119800--Sobic001G261545 Sobic008G119800--Sobic005G091300 Sobic005G028800 Sobic005G028800 Sobic008G119800--Sobic005G028800 Sobic007G166300 Sobic007G166300 Sobic008G119800--Sobic007G166300 Sobic001G276300 Sobic001G276300 Sobic008G119800--Sobic001G276300 Sobic004G322700 Sobic004G322700 Sobic009G246300--Sobic004G322700 Sobic001G221800 Sobic001G221800 Sobic009G246300--Sobic001G221800 Sobic003G139500 Sobic003G139500 Sobic009G246300--Sobic003G139500 Sobic003G277600 Sobic003G277600 Sobic009G246300--Sobic003G277600 Sobic004G322600 Sobic004G322600 Sobic009G246300--Sobic004G322600 Sobic009G016000 Sobic009G016000 Sobic009G246300--Sobic009G016000 Sobic009G246300--Sobic001G073300 Sobic009G246300--Sobic001G244600 Sobic001G244700 Sobic001G244700 Sobic009G246300--Sobic001G244700 Sobic006G259700--Sobic002G041200 Sobic006G259700--Sobic009G003000 Sobic008G150100 Sobic008G150100 Sobic006G259700--Sobic008G150100 Sobic006G259700--Sobic001G142800 Sobic006G259700--Sobic006G271500 Sobic009G139900 Sobic009G139900 Sobic006G259700--Sobic009G139900 Sobic001G243100 Sobic001G243100 Sobic006G259700--Sobic001G243100 Sobic010G115500 Sobic010G115500 Sobic006G259700--Sobic010G115500 Sobic001G203400 Sobic001G203400 Sobic006G259700--Sobic001G203400 Sobic003G103300 Sobic003G103300 Sobic004G113100--Sobic003G103300 Sobic004G125800 Sobic004G125800 Sobic004G113100--Sobic004G125800 Sobic001G015200 Sobic001G015200 Sobic004G113100--Sobic001G015200 Sobic007G046950 Sobic007G046950 Sobic004G113100--Sobic007G046950 Sobic010G101000 Sobic010G101000 Sobic004G113100--Sobic010G101000 Sobic009G225600 Sobic009G225600 Sobic004G113100--Sobic009G225600 Sobic005G062700 Sobic005G062700 Sobic004G113100--Sobic005G062700 Sobic002G030900 Sobic002G030900 Sobic004G113100--Sobic002G030900 Sobic001G104700 Sobic001G104700 Sobic004G113100--Sobic001G104700 Sobic004G059600 Sobic004G059600 Sobic009G176800--Sobic004G059600 Sobic009G176800--Sobic003G134600 Sobic005G115600 Sobic005G115600 Sobic009G176800--Sobic005G115600 Sobic004G323900 Sobic004G323900 Sobic009G176800--Sobic004G323900 Sobic004G106300 Sobic004G106300 Sobic009G176800--Sobic004G106300 Sobic009G176800--Sobic006G271500 Sobic009G176800--Sobic004G238100 Sobic009G176800--Sobic009G003000 Sobic009G176800--Sobic001G142800
Octagon: transcription factors


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