Gene annotation
Transcriptome id Sobic.008G119800.2
Synonym
Functional annotation NB-ARC domain containing disease resistance protein, putative, expressed
UniProt A0A1Z5R656
Pfam PF00931
Panther DB PTHR23155 PTHR23155:SF629
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G14470 : NB-ARC domain-containing disease resistance protein
RAP-DB (Rice) LOC_Os12g25170.1 : NB-ARC domain containing disease resistance protein, putative, expressed
MaizeGDB (Corn) Zm00025a025530 , Zm00025a025527
Brachypodium KQJ86818
Barley HORVU7Hr1G021940.1 , HORVU7Hr1G021830.11 , HORVU7Hr1G021830.10 , HORVU7Hr1G021830.5 , HORVU7Hr1G021830.4 , HORVU7Hr1G021830.6 , HORVU7Hr1G021830.9 , HORVU7Hr1G021830.8
Wheat TraesCS4A02G402100 , TraesCS4A02G402100 , TraesCS4A02G402100 , TraesCS4A02G402100 , TraesCS7D02G097500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G225701 - -
2 Sobic.001G411400 response regulator receiver domain containing protein, expressed K12129: pseudo-response regulator 7
3 Sobic.007G135800 ATP-dependent Clp protease adaptor protein ClpS containing protein, expressed K06891: ATP-dependent Clp protease adaptor protein ClpS
4 Sobic.001G509200 "similar to 9,10-9',10' carotenoid cleavage dioxygenase 1"(PubMedID : 29862293)@carotenoid cleavage dioxygenase, putative, expressed K11159: carotenoid cleavage oxygenase
5 Sobic.001G261545 - K01669: deoxyribodipyrimidine photo-lyase
6 Sobic.005G091300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@receptor-like protein kinase 5 precursor, putative, expressed -
7 Sobic.005G028800 astaxanthin synthase KC28, putative, expressed -
8 Sobic.007G166300 PPDK(PubMedID : 19549309)@lactate/malate dehydrogenase family protein(PubMedID : 26465154)@NADP-malete dehydrogenase(PubMedID : 26904072)@-(PubMedID : 26976818)@"enzyme exhibits extensions at both the N- and C-termini, Chloroplast Enzyme"(PubMedID : 2373367)@lactate/malate dehydrogenase, putative, expressed K00051: malate dehydrogenase (NADP+)
9 Sobic.001G276300 peptide transporter PTR2, putative, expressed -
10 Sobic.007G087100 pentatricopeptide, putative, expressed -
11 Sobic.010G171600 STE_MEKK_ste11_MAP3K.12 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K04733: interleukin-1 receptor-associated kinase 4
12 Sobic.001G368600 NAD dependent epimerase/dehydratase family protein, putative, expressed -
13 Sobic.010G231500 glutamate receptor, putative, expressed K05387: glutamate receptor, ionotropic, plant
14 Sobic.006G026100 expressed protein -
15 Sobic.001G393300 HAD-superfamily hydrolase, subfamily IA, variant 3 containing protein, expressed -
16 Sobic.006G212800 expressed protein -
17 Sobic.006G232600 amine oxidase, flavin-containing, domain containing protein, expressed K02293: PDS, 15-cis-phytoene desaturase
18 Sobic.008G077500 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed -
19 Sobic.004G103300 Complex I intermediate-associated protein 30 domain containing protein, putative, expressed -
20 Sobic.002G072500 expressed protein -


Gene co-expression network
sample Sobic008G119800 Sobic008G119800 Sobic010G225701 Sobic010G225701 Sobic008G119800--Sobic010G225701 Sobic001G411400 Sobic001G411400 Sobic008G119800--Sobic001G411400 Sobic007G135800 Sobic007G135800 Sobic008G119800--Sobic007G135800 Sobic001G509200 Sobic001G509200 Sobic008G119800--Sobic001G509200 Sobic001G261545 Sobic001G261545 Sobic008G119800--Sobic001G261545 Sobic005G091300 Sobic005G091300 Sobic008G119800--Sobic005G091300 Sobic005G028800 Sobic005G028800 Sobic008G119800--Sobic005G028800 Sobic007G166300 Sobic007G166300 Sobic008G119800--Sobic007G166300 Sobic001G276300 Sobic001G276300 Sobic008G119800--Sobic001G276300 Sobic007G006200 Sobic007G006200 Sobic010G225701--Sobic007G006200 Sobic002G162400 Sobic002G162400 Sobic010G225701--Sobic002G162400 Sobic009G194500 Sobic009G194500 Sobic010G225701--Sobic009G194500 Sobic001G244600 Sobic001G244600 Sobic010G225701--Sobic001G244600 Sobic001G243200 Sobic001G243200 Sobic010G225701--Sobic001G243200 Sobic001G077300 Sobic001G077300 Sobic010G225701--Sobic001G077300 Sobic001G263100 Sobic001G263100 Sobic010G225701--Sobic001G263100 Sobic006G235300 Sobic006G235300 Sobic010G225701--Sobic006G235300 Sobic008G038500 Sobic008G038500 Sobic010G225701--Sobic008G038500 Sobic002G225100 Sobic002G225100 Sobic001G411400--Sobic002G225100 Sobic002G198300 Sobic002G198300 Sobic001G411400--Sobic002G198300 Sobic001G411400--Sobic001G276300 Sobic003G327000 Sobic003G327000 Sobic001G411400--Sobic003G327000 Sobic004G207400 Sobic004G207400 Sobic001G411400--Sobic004G207400 Sobic001G436400 Sobic001G436400 Sobic001G411400--Sobic001G436400 Sobic009G207900 Sobic009G207900 Sobic001G411400--Sobic009G207900 Sobic001G368600 Sobic001G368600 Sobic001G411400--Sobic001G368600 Sobic002G298800 Sobic002G298800 Sobic001G411400--Sobic002G298800 Sobic007G135800--Sobic001G509200 Sobic003G094100 Sobic003G094100 Sobic007G135800--Sobic003G094100 Sobic001G393300 Sobic001G393300 Sobic007G135800--Sobic001G393300 Sobic001G180200 Sobic001G180200 Sobic007G135800--Sobic001G180200 Sobic004G103300 Sobic004G103300 Sobic007G135800--Sobic004G103300 Sobic006G213700 Sobic006G213700 Sobic007G135800--Sobic006G213700 Sobic007G135800--Sobic007G166300 Sobic003G409700 Sobic003G409700 Sobic007G135800--Sobic003G409700 Sobic003G341300 Sobic003G341300 Sobic007G135800--Sobic003G341300 Sobic001G509200--Sobic007G135800 Sobic001G509200--Sobic004G103300 Sobic001G509200--Sobic001G393300 Sobic007G108900 Sobic007G108900 Sobic001G509200--Sobic007G108900 Sobic001G509200--Sobic007G166300 Sobic001G509200--Sobic003G094100 Sobic001G509200--Sobic006G213700 Sobic006G090100 Sobic006G090100 Sobic001G509200--Sobic006G090100 Sobic009G073900 Sobic009G073900 Sobic001G509200--Sobic009G073900 Sobic007G136200 Sobic007G136200 Sobic001G261545--Sobic007G136200 Sobic010G171600 Sobic010G171600 Sobic001G261545--Sobic010G171600 Sobic005G100600 Sobic005G100600 Sobic001G261545--Sobic005G100600 Sobic009G103000 Sobic009G103000 Sobic001G261545--Sobic009G103000 Sobic003G264800 Sobic003G264800 Sobic001G261545--Sobic003G264800 Sobic007G058001 Sobic007G058001 Sobic001G261545--Sobic007G058001 Sobic001G085600 Sobic001G085600 Sobic001G261545--Sobic001G085600 Sobic006G232600 Sobic006G232600 Sobic001G261545--Sobic006G232600 Sobic001G261545--Sobic001G436400 Sobic001G073300 Sobic001G073300 Sobic005G091300--Sobic001G073300 Sobic007G140700 Sobic007G140700 Sobic005G091300--Sobic007G140700 Sobic002G306800 Sobic002G306800 Sobic005G091300--Sobic002G306800 Sobic005G091300--Sobic001G244600 Sobic001G483300 Sobic001G483300 Sobic005G091300--Sobic001G483300 Sobic005G091300--Sobic002G162400 Sobic005G091300--Sobic003G409700 Sobic006G235350 Sobic006G235350 Sobic005G091300--Sobic006G235350 Sobic002G183900 Sobic002G183900 Sobic005G091300--Sobic002G183900 Sobic005G028800--Sobic007G166300 Sobic005G028800--Sobic004G103300 Sobic005G028800--Sobic001G509200 Sobic004G124400 Sobic004G124400 Sobic005G028800--Sobic004G124400 Sobic001G015200 Sobic001G015200 Sobic005G028800--Sobic001G015200 Sobic005G028800--Sobic007G135800 Sobic010G231500 Sobic010G231500 Sobic005G028800--Sobic010G231500 Sobic005G028800--Sobic001G393300 Sobic007G124500 Sobic007G124500 Sobic005G028800--Sobic007G124500 Sobic007G166300--Sobic005G028800 Sobic007G166300--Sobic001G393300 Sobic007G166300--Sobic004G103300 Sobic007G166300--Sobic001G509200 Sobic007G166300--Sobic001G015200 Sobic007G166300--Sobic007G124500 Sobic007G166300--Sobic007G135800 Sobic007G166300--Sobic007G108900 Sobic007G166300--Sobic002G298800 Sobic001G276300--Sobic007G135800 Sobic001G276300--Sobic001G509200 Sobic001G276300--Sobic005G028800 Sobic001G276300--Sobic006G213700 Sobic003G380200 Sobic003G380200 Sobic001G276300--Sobic003G380200 Sobic006G226601 Sobic006G226601 Sobic001G276300--Sobic006G226601 Sobic001G276300--Sobic010G231500 Sobic007G169100 Sobic007G169100 Sobic001G276300--Sobic007G169100 Sobic001G276300--Sobic002G225100
Octagon: transcription factors


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