Gene annotation
Transcriptome id Sobic.001G411400.1
Synonym PRR7, Sb01g038820, APRR7
Functional annotation response regulator receiver domain containing protein, expressed
UniProt A0A059PU57 , G4XFK7 , A0A059PTM0 , G4XFK2 , G4XFK3 , C5WNM8 , G4XFK6 , A0A2U9QI43 , G4XFK1 , A0A059PTL4 , A0A059PU67 , G4XFK5 , A0A059PU36 , A0A059PT02
Pfam PF06203 PF00072
Panther DB PTHR26402 PTHR26402:SF525
NCBI CDD -
KEGG Orthology K12129; pseudo-response regulator 7
Gene Ontology GO:0005515; protein binding GO:0000160phosphorelay signal transduction system


Orthologs (automatic annotation)
TAIR AT5G02810 : pseudo-response regulator 7
RAP-DB (Rice) LOC_Os03g17570.2 : response regulator receiver domain containing protein, expressed
MaizeGDB (Corn) Zm00025a052710
Brachypodium KQK22216 , KQK22217 , KQK22218 , KQK22219 , KQK22220
Barley -
Wheat -
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.001G411400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G225100 bZIP transcription factor, putative, expressed K14432: ABA responsive element binding factor
2 Sobic.002G198300 zinc finger, C3HC4 type domain containing protein, expressed -
3 Sobic.001G276300 peptide transporter PTR2, putative, expressed -
4 Sobic.003G327000 bZIP transcription factor domain containing protein, expressed -
5 Sobic.004G207400 hydroxymethylbutenyl 4-diphosphate synthase, putative, expressed K03526: gcpE, (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase
6 Sobic.001G436400 immature colon carcinoma transcript 1 protein precursor, putative, expressed K15033: peptidyl-tRNA hydrolase ICT1
7 Sobic.009G207900 expressed protein -
8 Sobic.001G368600 NAD dependent epimerase/dehydratase family protein, putative, expressed -
9 Sobic.002G298800 PAP fibrillin family domain containing protein, expressed -
10 Sobic.003G073800 phosphatidate cytidylyltransferase, putative, expressed K00981: E2.7.7.41, CDS1, CDS2, phosphatidate cytidylyltransferase
11 Sobic.001G393300 HAD-superfamily hydrolase, subfamily IA, variant 3 containing protein, expressed -
12 Sobic.005G005400 MATE efflux family protein(PubMedID : 26465154)@MATE efflux protein, putative, expressed -
13 Sobic.001G509200 "similar to 9,10-9',10' carotenoid cleavage dioxygenase 1"(PubMedID : 29862293)@carotenoid cleavage dioxygenase, putative, expressed K11159: carotenoid cleavage oxygenase
14 Sobic.008G039900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 26976818)@glycine dehydrogenase, putative, expressed K00281: GLDC, glycine dehydrogenase
15 Sobic.006G097500 zeaxanthin epoxidase, chloroplast precursor, putative, expressed K09838: ZEP, zeaxanthin epoxidase
16 Sobic.003G264800 expressed protein -
17 Sobic.001G217900 PPR repeat domain containing protein, putative, expressed -
18 Sobic.003G203300 stress regulated protein, putative, expressed -
19 Sobic.001G536700 expressed protein -
20 Sobic.004G103300 Complex I intermediate-associated protein 30 domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic001G411400 Sobic001G411400 Sobic002G225100 Sobic002G225100 Sobic001G411400--Sobic002G225100 Sobic002G198300 Sobic002G198300 Sobic001G411400--Sobic002G198300 Sobic001G276300 Sobic001G276300 Sobic001G411400--Sobic001G276300 Sobic003G327000 Sobic003G327000 Sobic001G411400--Sobic003G327000 Sobic004G207400 Sobic004G207400 Sobic001G411400--Sobic004G207400 Sobic001G436400 Sobic001G436400 Sobic001G411400--Sobic001G436400 Sobic009G207900 Sobic009G207900 Sobic001G411400--Sobic009G207900 Sobic001G368600 Sobic001G368600 Sobic001G411400--Sobic001G368600 Sobic002G298800 Sobic002G298800 Sobic001G411400--Sobic002G298800 Sobic006G212800 Sobic006G212800 Sobic002G225100--Sobic006G212800 Sobic002G225100--Sobic004G207400 Sobic002G225100--Sobic009G207900 Sobic009G170200 Sobic009G170200 Sobic002G225100--Sobic009G170200 Sobic002G225100--Sobic001G276300 Sobic002G225100--Sobic001G411400 Sobic007G135800 Sobic007G135800 Sobic002G225100--Sobic007G135800 Sobic006G232600 Sobic006G232600 Sobic002G225100--Sobic006G232600 Sobic007G107700 Sobic007G107700 Sobic002G225100--Sobic007G107700 Sobic002G198300--Sobic002G298800 Sobic001G393300 Sobic001G393300 Sobic002G198300--Sobic001G393300 Sobic007G103400 Sobic007G103400 Sobic002G198300--Sobic007G103400 Sobic002G198300--Sobic001G368600 Sobic010G125833 Sobic010G125833 Sobic002G198300--Sobic010G125833 Sobic001G504400 Sobic001G504400 Sobic002G198300--Sobic001G504400 Sobic001G378100 Sobic001G378100 Sobic002G198300--Sobic001G378100 Sobic003G306200 Sobic003G306200 Sobic002G198300--Sobic003G306200 Sobic001G536700 Sobic001G536700 Sobic002G198300--Sobic001G536700 Sobic001G276300--Sobic007G135800 Sobic001G509200 Sobic001G509200 Sobic001G276300--Sobic001G509200 Sobic005G028800 Sobic005G028800 Sobic001G276300--Sobic005G028800 Sobic006G213700 Sobic006G213700 Sobic001G276300--Sobic006G213700 Sobic003G380200 Sobic003G380200 Sobic001G276300--Sobic003G380200 Sobic006G226601 Sobic006G226601 Sobic001G276300--Sobic006G226601 Sobic010G231500 Sobic010G231500 Sobic001G276300--Sobic010G231500 Sobic007G169100 Sobic007G169100 Sobic001G276300--Sobic007G169100 Sobic001G276300--Sobic002G225100 Sobic003G327000--Sobic009G207900 Sobic003G094100 Sobic003G094100 Sobic003G327000--Sobic003G094100 Sobic003G327000--Sobic001G504400 Sobic003G327000--Sobic001G393300 Sobic003G327000--Sobic002G298800 Sobic009G038701 Sobic009G038701 Sobic003G327000--Sobic009G038701 Sobic003G327000--Sobic007G135800 Sobic003G327000--Sobic002G198300 Sobic003G327000--Sobic010G125833 Sobic002G072400 Sobic002G072400 Sobic004G207400--Sobic002G072400 Sobic004G207400--Sobic006G232600 Sobic004G238200 Sobic004G238200 Sobic004G207400--Sobic004G238200 Sobic004G207400--Sobic009G170200 Sobic003G203300 Sobic003G203300 Sobic004G207400--Sobic003G203300 Sobic004G207400--Sobic002G225100 Sobic004G300100 Sobic004G300100 Sobic004G207400--Sobic004G300100 Sobic004G281900 Sobic004G281900 Sobic004G207400--Sobic004G281900 Sobic007G166200 Sobic007G166200 Sobic004G207400--Sobic007G166200 Sobic004G103300 Sobic004G103300 Sobic001G436400--Sobic004G103300 Sobic001G436400--Sobic005G028800 Sobic007G166300 Sobic007G166300 Sobic001G436400--Sobic007G166300 Sobic007G108900 Sobic007G108900 Sobic001G436400--Sobic007G108900 Sobic001G436400--Sobic001G509200 Sobic001G015200 Sobic001G015200 Sobic001G436400--Sobic001G015200 Sobic001G436400--Sobic001G393300 Sobic004G124400 Sobic004G124400 Sobic001G436400--Sobic004G124400 Sobic001G436400--Sobic002G298800 Sobic009G207900--Sobic006G212800 Sobic001G180200 Sobic001G180200 Sobic009G207900--Sobic001G180200 Sobic002G206300 Sobic002G206300 Sobic009G207900--Sobic002G206300 Sobic009G207900--Sobic001G504400 Sobic009G219100 Sobic009G219100 Sobic009G207900--Sobic009G219100 Sobic009G207900--Sobic007G135800 Sobic009G207900--Sobic009G038701 Sobic003G073800 Sobic003G073800 Sobic009G207900--Sobic003G073800 Sobic009G062400 Sobic009G062400 Sobic009G207900--Sobic009G062400 Sobic001G368600--Sobic004G103300 Sobic006G097500 Sobic006G097500 Sobic001G368600--Sobic006G097500 Sobic001G368600--Sobic002G298800 Sobic001G368600--Sobic001G393300 Sobic001G368600--Sobic007G135800 Sobic002G072500 Sobic002G072500 Sobic001G368600--Sobic002G072500 Sobic001G368600--Sobic002G198300 Sobic001G368600--Sobic007G166300 Sobic006G025500 Sobic006G025500 Sobic001G368600--Sobic006G025500 Sobic002G298800--Sobic001G393300 Sobic002G298800--Sobic002G198300 Sobic002G298800--Sobic004G103300 Sobic002G298800--Sobic007G103400 Sobic002G298800--Sobic006G097500 Sobic002G298800--Sobic001G368600 Sobic002G298800--Sobic003G094100 Sobic004G353100 Sobic004G353100 Sobic002G298800--Sobic004G353100 Sobic002G275300 Sobic002G275300 Sobic002G298800--Sobic002G275300
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.