Gene annotation
Transcriptome id Sobic.005G091300.2,Sobic.005G091300.1
Synonym Sb05g007490
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
receptor-like protein kinase 5 precursor, putative, expressed
UniProt C5Y889
Pfam PF08263 PF00560 PF13855 PF00069
Panther DB PTHR27000 PTHR27000:SF135
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0006468protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G72180 : Leucine-rich receptor-like protein kinase family protein
RAP-DB (Rice) LOC_Os11g12530.1 : receptor-like protein kinase 5 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a020124 , Zm00025a016954 , Zm00025a018497 , Zm00025a001429 , Zm00025a030297 , Zm00025a048740 , Zm00025a029517 , Zm00025a030142
Brachypodium PNT63860 , KQJ88871 , KQJ95505
Barley HORVU4Hr1G065620.3 , HORVU4Hr1G065620.2 , HORVU4Hr1G065620.1 , HORVU0Hr1G022670.4 , HORVU0Hr1G022670.1 , HORVU0Hr1G022670.3 , HORVU0Hr1G022670.2 , HORVU4Hr1G015740.2 , HORVU4Hr1G015740.1 , HORVU1Hr1G025040.4 , HORVU1Hr1G025040.5 , HORVU1Hr1G025040.2 , HORVU1Hr1G025040.3 , HORVU1Hr1G025040.1 , HORVU2Hr1G125360.4
Wheat TraesCS4D02G088500 , TraesCS4A02G224700 , TraesCS7D02G318600 , TraesCS7D02G318600 , TraesCS1B02G479300 , TraesCS1B02G479300 , TraesCS1B02G134100 , TraesCS1A02G113800 , TraesCS4B02G091500 , TraesCS4A02G059000
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.005G091300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G073300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methyltransferase, putative, expressed -
2 Sobic.007G140700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aldehyde dehydrogenase, putative, expressed K00131: glyceraldehyde-3-phosphate dehydrogenase (NADP+)
3 Sobic.002G306800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@monooxygenase, putative, expressed -
4 Sobic.001G244600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@KIP1, putative, expressed -
5 Sobic.001G483300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.002G162400 potassium channel protein, putative, expressed K05389: potassium channel subfamily K, other eukaryote
7 Sobic.003G409700 rieske domain containing protein, expressed -
8 Sobic.006G235350 - -
9 Sobic.002G183900 DUF581 domain containing protein, expressed -
10 Sobic.003G005000 expressed protein -
11 Sobic.003G341300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.008G064500 TPR domain protein, putative, expressed -
13 Sobic.001G499100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ABC-2 type transporter domain containing protein, expressed -
14 Sobic.003G228300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450 72A1, putative, expressed -
15 Sobic.007G135800 ATP-dependent Clp protease adaptor protein ClpS containing protein, expressed K06891: ATP-dependent Clp protease adaptor protein ClpS
16 Sobic.002G314300 OsAPRL1 adenosine 5\'-phosphosulfate reductase-like OsAPRL1, expressed K05907: adenylyl-sulfate reductase (glutathione)
17 Sobic.004G238100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09874: aquaporin NIP
18 Sobic.002G402700 -(PubMedID : 26976818)@ferredoxin-dependent glutamate synthase, chloroplast precursor, putative, expressed K00284: GLU, glutamate synthase (ferredoxin)
19 Sobic.001G485100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.009G132000 expressed protein -


Gene co-expression network
sample Sobic005G091300 Sobic005G091300 Sobic001G073300 Sobic001G073300 Sobic005G091300--Sobic001G073300 Sobic007G140700 Sobic007G140700 Sobic005G091300--Sobic007G140700 Sobic002G306800 Sobic002G306800 Sobic005G091300--Sobic002G306800 Sobic001G244600 Sobic001G244600 Sobic005G091300--Sobic001G244600 Sobic001G483300 Sobic001G483300 Sobic005G091300--Sobic001G483300 Sobic002G162400 Sobic002G162400 Sobic005G091300--Sobic002G162400 Sobic003G409700 Sobic003G409700 Sobic005G091300--Sobic003G409700 Sobic006G235350 Sobic006G235350 Sobic005G091300--Sobic006G235350 Sobic002G183900 Sobic002G183900 Sobic005G091300--Sobic002G183900 Sobic010G104800 Sobic010G104800 Sobic001G073300--Sobic010G104800 Sobic006G161500 Sobic006G161500 Sobic001G073300--Sobic006G161500 Sobic009G256100 Sobic009G256100 Sobic001G073300--Sobic009G256100 Sobic001G073300--Sobic001G244600 Sobic001G073300--Sobic003G409700 Sobic002G390100 Sobic002G390100 Sobic001G073300--Sobic002G390100 Sobic010G231300 Sobic010G231300 Sobic001G073300--Sobic010G231300 Sobic003G042900 Sobic003G042900 Sobic001G073300--Sobic003G042900 Sobic008G129900 Sobic008G129900 Sobic001G073300--Sobic008G129900 Sobic003G341300 Sobic003G341300 Sobic007G140700--Sobic003G341300 Sobic007G140700--Sobic002G162400 Sobic002G382700 Sobic002G382700 Sobic007G140700--Sobic002G382700 Sobic009G194500 Sobic009G194500 Sobic007G140700--Sobic009G194500 Sobic007G140700--Sobic010G231300 Sobic001G258200 Sobic001G258200 Sobic007G140700--Sobic001G258200 Sobic001G077300 Sobic001G077300 Sobic007G140700--Sobic001G077300 Sobic007G140700--Sobic003G409700 Sobic007G140700--Sobic001G244600 Sobic003G005000 Sobic003G005000 Sobic002G306800--Sobic003G005000 Sobic001G289500 Sobic001G289500 Sobic002G306800--Sobic001G289500 Sobic002G306800--Sobic003G341300 Sobic007G157300 Sobic007G157300 Sobic002G306800--Sobic007G157300 Sobic002G306800--Sobic002G382700 Sobic003G094100 Sobic003G094100 Sobic002G306800--Sobic003G094100 Sobic001G283100 Sobic001G283100 Sobic002G306800--Sobic001G283100 Sobic004G035900 Sobic004G035900 Sobic002G306800--Sobic004G035900 Sobic004G202200 Sobic004G202200 Sobic002G306800--Sobic004G202200 Sobic001G244600--Sobic008G129900 Sobic001G244600--Sobic010G104800 Sobic001G244600--Sobic006G161500 Sobic001G244600--Sobic009G256100 Sobic001G244600--Sobic001G073300 Sobic007G058100 Sobic007G058100 Sobic001G244600--Sobic007G058100 Sobic001G217900 Sobic001G217900 Sobic001G244600--Sobic001G217900 Sobic008G038500 Sobic008G038500 Sobic001G244600--Sobic008G038500 Sobic001G244600--Sobic010G231300 Sobic001G483300--Sobic002G183900 Sobic002G402700 Sobic002G402700 Sobic001G483300--Sobic002G402700 Sobic010G173400 Sobic010G173400 Sobic001G483300--Sobic010G173400 Sobic003G154300 Sobic003G154300 Sobic001G483300--Sobic003G154300 Sobic002G404800 Sobic002G404800 Sobic001G483300--Sobic002G404800 Sobic001G483300--Sobic003G042900 Sobic007G105500 Sobic007G105500 Sobic001G483300--Sobic007G105500 Sobic002G056500 Sobic002G056500 Sobic001G483300--Sobic002G056500 Sobic003G355200 Sobic003G355200 Sobic001G483300--Sobic003G355200 Sobic002G162400--Sobic003G341300 Sobic001G263100 Sobic001G263100 Sobic002G162400--Sobic001G263100 Sobic001G180200 Sobic001G180200 Sobic002G162400--Sobic001G180200 Sobic002G206300 Sobic002G206300 Sobic002G162400--Sobic002G206300 Sobic002G162400--Sobic010G231300 Sobic006G235400 Sobic006G235400 Sobic002G162400--Sobic006G235400 Sobic002G162400--Sobic001G077300 Sobic002G162400--Sobic001G258200 Sobic002G162400--Sobic008G129900 Sobic003G409700--Sobic003G341300 Sobic009G133700 Sobic009G133700 Sobic003G409700--Sobic009G133700 Sobic007G135800 Sobic007G135800 Sobic003G409700--Sobic007G135800 Sobic003G409700--Sobic006G235400 Sobic003G409700--Sobic006G161500 Sobic003G380200 Sobic003G380200 Sobic003G409700--Sobic003G380200 Sobic004G128900 Sobic004G128900 Sobic003G409700--Sobic004G128900 Sobic003G409700--Sobic007G157300 Sobic003G228300 Sobic003G228300 Sobic003G409700--Sobic003G228300 Sobic006G140500 Sobic006G140500 Sobic006G235350--Sobic006G140500 Sobic006G235350--Sobic004G202200 Sobic007G166300 Sobic007G166300 Sobic006G235350--Sobic007G166300 Sobic005G028800 Sobic005G028800 Sobic006G235350--Sobic005G028800 Sobic006G235350--Sobic003G005000 Sobic006G235350--Sobic001G289500 Sobic002G223700 Sobic002G223700 Sobic006G235350--Sobic002G223700 Sobic001G015200 Sobic001G015200 Sobic006G235350--Sobic001G015200 Sobic009G132000 Sobic009G132000 Sobic006G235350--Sobic009G132000 Sobic002G183900--Sobic001G483300 Sobic004G312800 Sobic004G312800 Sobic002G183900--Sobic004G312800 Sobic001G011400 Sobic001G011400 Sobic002G183900--Sobic001G011400 Sobic002G183900--Sobic002G306800 Sobic002G183900--Sobic010G173400 Sobic002G183900--Sobic003G042900 Sobic002G219300 Sobic002G219300 Sobic002G183900--Sobic002G219300 Sobic002G183900--Sobic002G404800 Sobic002G183900--Sobic007G105500
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.