Gene annotation
Transcriptome id Sobic.008G064500.1
Synonym Sb08g005390
Functional annotation TPR domain protein, putative, expressed
UniProt C5YTA0
Pfam -
Panther DB PTHR37910
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os12g08790.1 : TPR domain protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQJ91950
Barley HORVU3Hr1G017000.1 , HORVU3Hr1G017000.2
Wheat -
Populus -


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cDNA sequences
Sobic.008G064500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G235350 - -
2 Sobic.009G210200 Acid phosphatase/vanadium-dependent haloperoxidase-related protein(PubMedID : 26465154)@Divergent PAP2 family domain containing protein, expressed -
3 Sobic.006G140500 photosystem-II repair protein, putative, expressed -
4 Sobic.003G370000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chlorophyll A-B binding protein, putative, expressed K03542: photosystem II 22kDa protein
5 Sobic.002G314300 OsAPRL1 adenosine 5\'-phosphosulfate reductase-like OsAPRL1, expressed K05907: adenylyl-sulfate reductase (glutathione)
6 Sobic.001G289500 kinase, pfkB family, putative, expressed -
7 Sobic.003G005000 expressed protein -
8 Sobic.004G303200 cytochrome b561, putative, expressed K08360: cytochrome b-561
9 Sobic.002G047400 "protein containing PDZ domain, a K-box domain, and a TPR region"(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@SHOOT1 protein, putative, expressed -
10 Sobic.006G063900 NAD dependent epimerase/dehydratase family protein, putative, expressed -
11 Sobic.004G028300 expressed protein -
12 Sobic.004G202200 elongation factor Tu, putative, expressed K02358: tuf, elongation factor Tu
13 Sobic.002G306800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@monooxygenase, putative, expressed -
14 Sobic.006G102000 PAP fibrillin family domain containing protein, expressed -
15 Sobic.001G015200 Unnamed(PubMedID : 24676859)@S1 RNA binding domain containing protein, expressed -
16 Sobic.006G067400 Ser/Thr protein phosphatase family protein, putative, expressed -
17 Sobic.002G223700 OsRhmbd15 - Putative Rhomboid homologue, expressed -
18 Sobic.009G132000 expressed protein -
19 Sobic.008G088821 - K05356: SPS, all-trans-nonaprenyl-diphosphate synthase
20 Sobic.010G181300 SOUL heme-binding protein, putative, expressed -


Gene co-expression network
sample Sobic008G064500 Sobic008G064500 Sobic006G235350 Sobic006G235350 Sobic008G064500--Sobic006G235350 Sobic009G210200 Sobic009G210200 Sobic008G064500--Sobic009G210200 Sobic006G140500 Sobic006G140500 Sobic008G064500--Sobic006G140500 Sobic003G370000 Sobic003G370000 Sobic008G064500--Sobic003G370000 Sobic002G314300 Sobic002G314300 Sobic008G064500--Sobic002G314300 Sobic001G289500 Sobic001G289500 Sobic008G064500--Sobic001G289500 Sobic003G005000 Sobic003G005000 Sobic008G064500--Sobic003G005000 Sobic004G303200 Sobic004G303200 Sobic008G064500--Sobic004G303200 Sobic002G047400 Sobic002G047400 Sobic008G064500--Sobic002G047400 Sobic006G235350--Sobic006G140500 Sobic004G202200 Sobic004G202200 Sobic006G235350--Sobic004G202200 Sobic007G166300 Sobic007G166300 Sobic006G235350--Sobic007G166300 Sobic005G028800 Sobic005G028800 Sobic006G235350--Sobic005G028800 Sobic006G235350--Sobic003G005000 Sobic006G235350--Sobic001G289500 Sobic002G223700 Sobic002G223700 Sobic006G235350--Sobic002G223700 Sobic001G015200 Sobic001G015200 Sobic006G235350--Sobic001G015200 Sobic009G132000 Sobic009G132000 Sobic006G235350--Sobic009G132000 Sobic009G210200--Sobic008G064500 Sobic009G210200--Sobic004G303200 Sobic004G020300 Sobic004G020300 Sobic009G210200--Sobic004G020300 Sobic006G067400 Sobic006G067400 Sobic009G210200--Sobic006G067400 Sobic010G160700 Sobic010G160700 Sobic009G210200--Sobic010G160700 Sobic008G171300 Sobic008G171300 Sobic009G210200--Sobic008G171300 Sobic002G233700 Sobic002G233700 Sobic009G210200--Sobic002G233700 Sobic009G210200--Sobic006G235350 Sobic002G272100 Sobic002G272100 Sobic009G210200--Sobic002G272100 Sobic008G088821 Sobic008G088821 Sobic006G140500--Sobic008G088821 Sobic006G140500--Sobic006G235350 Sobic006G140500--Sobic001G015200 Sobic001G029600 Sobic001G029600 Sobic006G140500--Sobic001G029600 Sobic009G119300 Sobic009G119300 Sobic006G140500--Sobic009G119300 Sobic004G028300 Sobic004G028300 Sobic006G140500--Sobic004G028300 Sobic006G140500--Sobic004G202200 Sobic006G140500--Sobic005G028800 Sobic006G140500--Sobic007G166300 Sobic007G161500 Sobic007G161500 Sobic003G370000--Sobic007G161500 Sobic003G370000--Sobic001G289500 Sobic005G056400 Sobic005G056400 Sobic003G370000--Sobic005G056400 Sobic002G370600 Sobic002G370600 Sobic003G370000--Sobic002G370600 Sobic003G370000--Sobic002G314300 Sobic004G305800 Sobic004G305800 Sobic003G370000--Sobic004G305800 Sobic001G020100 Sobic001G020100 Sobic003G370000--Sobic001G020100 Sobic004G238600 Sobic004G238600 Sobic003G370000--Sobic004G238600 Sobic001G076900 Sobic001G076900 Sobic003G370000--Sobic001G076900 Sobic002G314300--Sobic007G161500 Sobic002G314300--Sobic003G370000 Sobic002G314300--Sobic001G289500 Sobic002G314300--Sobic008G064500 Sobic002G314300--Sobic005G056400 Sobic002G306800 Sobic002G306800 Sobic002G314300--Sobic002G306800 Sobic002G314300--Sobic001G020100 Sobic009G129300 Sobic009G129300 Sobic002G314300--Sobic009G129300 Sobic001G491000 Sobic001G491000 Sobic002G314300--Sobic001G491000 Sobic001G289500--Sobic003G005000 Sobic001G289500--Sobic001G491000 Sobic001G289500--Sobic004G202200 Sobic006G238200 Sobic006G238200 Sobic001G289500--Sobic006G238200 Sobic006G102000 Sobic006G102000 Sobic001G289500--Sobic006G102000 Sobic010G181300 Sobic010G181300 Sobic001G289500--Sobic010G181300 Sobic007G108900 Sobic007G108900 Sobic001G289500--Sobic007G108900 Sobic003G094100 Sobic003G094100 Sobic001G289500--Sobic003G094100 Sobic002G275300 Sobic002G275300 Sobic001G289500--Sobic002G275300 Sobic003G005000--Sobic001G289500 Sobic003G005000--Sobic003G094100 Sobic003G005000--Sobic009G132000 Sobic003G005000--Sobic002G306800 Sobic003G005000--Sobic007G108900 Sobic010G039500 Sobic010G039500 Sobic003G005000--Sobic010G039500 Sobic009G133700 Sobic009G133700 Sobic003G005000--Sobic009G133700 Sobic007G157300 Sobic007G157300 Sobic003G005000--Sobic007G157300 Sobic004G035900 Sobic004G035900 Sobic003G005000--Sobic004G035900 Sobic004G303200--Sobic002G233700 Sobic007G225500 Sobic007G225500 Sobic004G303200--Sobic007G225500 Sobic004G303200--Sobic006G102000 Sobic004G303200--Sobic010G160700 Sobic010G035400 Sobic010G035400 Sobic004G303200--Sobic010G035400 Sobic007G052400 Sobic007G052400 Sobic004G303200--Sobic007G052400 Sobic009G059300 Sobic009G059300 Sobic004G303200--Sobic009G059300 Sobic001G005200 Sobic001G005200 Sobic004G303200--Sobic001G005200 Sobic006G207800 Sobic006G207800 Sobic004G303200--Sobic006G207800 Sobic009G225600 Sobic009G225600 Sobic002G047400--Sobic009G225600 Sobic008G149100 Sobic008G149100 Sobic002G047400--Sobic008G149100 Sobic003G186800 Sobic003G186800 Sobic002G047400--Sobic003G186800 Sobic001G046000 Sobic001G046000 Sobic002G047400--Sobic001G046000 Sobic003G228300 Sobic003G228300 Sobic002G047400--Sobic003G228300 Sobic002G047400--Sobic001G015200 Sobic010G101000 Sobic010G101000 Sobic002G047400--Sobic010G101000 Sobic001G509200 Sobic001G509200 Sobic002G047400--Sobic001G509200 Sobic001G485100 Sobic001G485100 Sobic002G047400--Sobic001G485100
Octagon: transcription factors


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