Gene annotation
Transcriptome id Sobic.002G183900.1
Synonym Sb02g023170
Functional annotation DUF581 domain containing protein, expressed
UniProt C5XBA2
Pfam PF04570
Panther DB PTHR33059 PTHR33059:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G78020 : Protein of unknown function (DUF581)
RAP-DB (Rice) LOC_Os09g20240.1 : DUF581 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a006060 , Zm00025a013815 , Zm00025a046706 , Zm00025a031016
Brachypodium KQJ90014 , KQJ98219
Barley HORVU5Hr1G057840.3 , HORVU5Hr1G057840.2 , HORVU5Hr1G057840.1 , HORVU5Hr1G057840.6 , HORVU5Hr1G057840.5 , HORVU7Hr1G037410.4 , HORVU7Hr1G037410.5 , HORVU7Hr1G037410.6 , HORVU7Hr1G037410.1 , HORVU7Hr1G037410.2 , HORVU7Hr1G037410.3
Wheat TraesCS7D02G183500 , TraesCS7B02G086900 , TraesCS7A02G182100 , TraesCS5A02G191000 , TraesCS5D02G200000
Populus -


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cDNA sequences
Sobic.002G183900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G483300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.004G312800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tyrosine phosphatase family protein, putative, expressed K18045: SIW14, tyrosine-protein phosphatase SIW14
3 Sobic.001G011400 CRAL/TRIO domain containing protein, expressed -
4 Sobic.002G306800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@monooxygenase, putative, expressed -
5 Sobic.010G173400 down-regulated TF in developmental senescence(PubMedID : 27586543)@GATA zinc finger domain containing protein, expressed -
6 Sobic.003G042900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
7 Sobic.002G219300 ZOS9-13 - C2H2 zinc finger protein, expressed -
8 Sobic.002G404800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mitochondrial carrier protein, putative, expressed K14684: solute carrier family 25 (mitochondrial phosphate transporter), member 23/24/25/41
9 Sobic.007G105500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AGC_PVPK_like_kin82y.10 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
10 Sobic.003G154300 OsSCP3 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
11 Sobic.002G402700 -(PubMedID : 26976818)@ferredoxin-dependent glutamate synthase, chloroplast precursor, putative, expressed K00284: GLU, glutamate synthase (ferredoxin)
12 Sobic.005G039700 rhoGAP domain containing protein, expressed -
13 Sobic.007G140700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aldehyde dehydrogenase, putative, expressed K00131: glyceraldehyde-3-phosphate dehydrogenase (NADP+)
14 Sobic.008G140200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.001G073300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methyltransferase, putative, expressed -
16 Sobic.005G091300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@receptor-like protein kinase 5 precursor, putative, expressed -
17 Sobic.004G215800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed K04354: serine/threonine-protein phosphatase 2A regulatory subunit B
18 Sobic.006G077400 PAP fibrillin family domain containing protein, expressed -
19 Sobic.009G140300 MLO domain containing protein, putative, expressed K08472: mlo protein
20 Sobic.008G064500 TPR domain protein, putative, expressed -


Gene co-expression network
sample Sobic002G183900 Sobic002G183900 Sobic001G483300 Sobic001G483300 Sobic002G183900--Sobic001G483300 Sobic004G312800 Sobic004G312800 Sobic002G183900--Sobic004G312800 Sobic001G011400 Sobic001G011400 Sobic002G183900--Sobic001G011400 Sobic002G306800 Sobic002G306800 Sobic002G183900--Sobic002G306800 Sobic010G173400 Sobic010G173400 Sobic002G183900--Sobic010G173400 Sobic003G042900 Sobic003G042900 Sobic002G183900--Sobic003G042900 Sobic002G219300 Sobic002G219300 Sobic002G183900--Sobic002G219300 Sobic002G404800 Sobic002G404800 Sobic002G183900--Sobic002G404800 Sobic007G105500 Sobic007G105500 Sobic002G183900--Sobic007G105500 Sobic001G483300--Sobic002G183900 Sobic002G402700 Sobic002G402700 Sobic001G483300--Sobic002G402700 Sobic001G483300--Sobic010G173400 Sobic003G154300 Sobic003G154300 Sobic001G483300--Sobic003G154300 Sobic001G483300--Sobic002G404800 Sobic001G483300--Sobic003G042900 Sobic001G483300--Sobic007G105500 Sobic002G056500 Sobic002G056500 Sobic001G483300--Sobic002G056500 Sobic003G355200 Sobic003G355200 Sobic001G483300--Sobic003G355200 Sobic004G312800--Sobic002G183900 Sobic009G210200 Sobic009G210200 Sobic004G312800--Sobic009G210200 Sobic004G303200 Sobic004G303200 Sobic004G312800--Sobic004G303200 Sobic006G235350 Sobic006G235350 Sobic004G312800--Sobic006G235350 Sobic005G039700 Sobic005G039700 Sobic004G312800--Sobic005G039700 Sobic002G405100 Sobic002G405100 Sobic004G312800--Sobic002G405100 Sobic002G133900 Sobic002G133900 Sobic004G312800--Sobic002G133900 Sobic009G140300 Sobic009G140300 Sobic004G312800--Sobic009G140300 Sobic004G331700 Sobic004G331700 Sobic004G312800--Sobic004G331700 Sobic001G011400--Sobic010G173400 Sobic003G409700 Sobic003G409700 Sobic001G011400--Sobic003G409700 Sobic007G140700 Sobic007G140700 Sobic001G011400--Sobic007G140700 Sobic002G028400 Sobic002G028400 Sobic001G011400--Sobic002G028400 Sobic001G073300 Sobic001G073300 Sobic001G011400--Sobic001G073300 Sobic001G540600 Sobic001G540600 Sobic001G011400--Sobic001G540600 Sobic001G011400--Sobic003G042900 Sobic006G161500 Sobic006G161500 Sobic001G011400--Sobic006G161500 Sobic003G271400 Sobic003G271400 Sobic001G011400--Sobic003G271400 Sobic003G005000 Sobic003G005000 Sobic002G306800--Sobic003G005000 Sobic001G289500 Sobic001G289500 Sobic002G306800--Sobic001G289500 Sobic003G341300 Sobic003G341300 Sobic002G306800--Sobic003G341300 Sobic007G157300 Sobic007G157300 Sobic002G306800--Sobic007G157300 Sobic002G382700 Sobic002G382700 Sobic002G306800--Sobic002G382700 Sobic003G094100 Sobic003G094100 Sobic002G306800--Sobic003G094100 Sobic001G283100 Sobic001G283100 Sobic002G306800--Sobic001G283100 Sobic004G035900 Sobic004G035900 Sobic002G306800--Sobic004G035900 Sobic004G202200 Sobic004G202200 Sobic002G306800--Sobic004G202200 Sobic010G173400--Sobic003G042900 Sobic010G173400--Sobic001G011400 Sobic010G173400--Sobic003G409700 Sobic008G129900 Sobic008G129900 Sobic010G173400--Sobic008G129900 Sobic008G033000 Sobic008G033000 Sobic010G173400--Sobic008G033000 Sobic010G173400--Sobic002G404800 Sobic010G173400--Sobic002G402700 Sobic010G173400--Sobic002G219300 Sobic010G173400--Sobic001G073300 Sobic003G042900--Sobic002G404800 Sobic002G390100 Sobic002G390100 Sobic003G042900--Sobic002G390100 Sobic003G042900--Sobic001G073300 Sobic009G256100 Sobic009G256100 Sobic003G042900--Sobic009G256100 Sobic004G165500 Sobic004G165500 Sobic003G042900--Sobic004G165500 Sobic010G104800 Sobic010G104800 Sobic003G042900--Sobic010G104800 Sobic004G215800 Sobic004G215800 Sobic003G042900--Sobic004G215800 Sobic003G042900--Sobic008G033000 Sobic003G042900--Sobic008G129900 Sobic002G219300--Sobic003G042900 Sobic006G093100 Sobic006G093100 Sobic002G219300--Sobic006G093100 Sobic002G196600 Sobic002G196600 Sobic002G219300--Sobic002G196600 Sobic002G219300--Sobic004G215800 Sobic002G219300--Sobic010G173400 Sobic002G219300--Sobic002G404800 Sobic002G219300--Sobic002G390100 Sobic002G219300--Sobic004G165500 Sobic002G219300--Sobic005G039700 Sobic002G404800--Sobic007G105500 Sobic003G036200 Sobic003G036200 Sobic002G404800--Sobic003G036200 Sobic002G404800--Sobic004G215800 Sobic005G101200 Sobic005G101200 Sobic002G404800--Sobic005G101200 Sobic002G404800--Sobic002G390100 Sobic002G404800--Sobic009G256100 Sobic003G185900 Sobic003G185900 Sobic002G404800--Sobic003G185900 Sobic002G404800--Sobic008G033000 Sobic004G112100 Sobic004G112100 Sobic002G404800--Sobic004G112100 Sobic007G105500--Sobic004G215800 Sobic007G105500--Sobic003G036200 Sobic007G105500--Sobic002G404800 Sobic007G105500--Sobic003G185900 Sobic003G367500 Sobic003G367500 Sobic007G105500--Sobic003G367500 Sobic007G105500--Sobic005G101200 Sobic007G105500--Sobic009G256100 Sobic007G105500--Sobic008G033000 Sobic010G085100 Sobic010G085100 Sobic007G105500--Sobic010G085100
Octagon: transcription factors


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