Gene annotation
Transcriptome id Sobic.002G219300.1
Synonym ZFP8, Sb02g026075
Functional annotation ZOS9-13 - C2H2 zinc finger protein, expressed
UniProt A0A1W0W5I0
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G41940 : zinc finger protein 8
RAP-DB (Rice) LOC_Os09g27320.1 : ZOS9-13 - C2H2 zinc finger protein, expressed
MaizeGDB (Corn) Zm00025a007430 , Zm00025a030753 , Zm00025a047195 , Zm00025a017316 , Zm00025a033046 , Zm00025a004392 , Zm00025a025172 , Zm00025a042483 , Zm00025a049619 , Zm00025a001503 , Zm00025a022299 , Zm00025a014022 , Zm00025a052932
Brachypodium KQJ98574 , KQJ90446 , KQK01658
Barley HORVU5Hr1G066750.1 , HORVU6Hr1G080870.1 , HORVU6Hr1G080870.2 , HORVU4Hr1G064150.2 , HORVU4Hr1G064150.3 , HORVU4Hr1G064150.1 , HORVU4Hr1G013330.1 , HORVU7Hr1G034930.2
Wheat TraesCS4D02G230300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G042900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
2 Sobic.006G093100 ferric-chelate reductase, putative, expressed -
3 Sobic.002G196600 1-phosphatidylinositol-4-phosphate 5-kinase/ zinc ion binding protein, putative, expressed K00921: PIKFYVE, 1-phosphatidylinositol-3-phosphate 5-kinase
4 Sobic.004G215800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed K04354: serine/threonine-protein phosphatase 2A regulatory subunit B
5 Sobic.010G173400 down-regulated TF in developmental senescence(PubMedID : 27586543)@GATA zinc finger domain containing protein, expressed -
6 Sobic.002G404800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mitochondrial carrier protein, putative, expressed K14684: solute carrier family 25 (mitochondrial phosphate transporter), member 23/24/25/41
7 Sobic.002G390100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.29 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07198: PRKAA, 5'-AMP-activated protein kinase, catalytic alpha subunit
8 Sobic.004G165500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.005G039700 rhoGAP domain containing protein, expressed -
10 Sobic.002G402700 -(PubMedID : 26976818)@ferredoxin-dependent glutamate synthase, chloroplast precursor, putative, expressed K00284: GLU, glutamate synthase (ferredoxin)
11 Sobic.007G105500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AGC_PVPK_like_kin82y.10 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
12 Sobic.001G073300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methyltransferase, putative, expressed -
13 Sobic.008G033000 CAAX amino terminal protease family protein, putative, expressed K07052: uncharacterized protein
14 Sobic.003G036200 NADP-ME(PubMedID : 19549309)@"SbC4-NADP-ME (L-malate:NADP oxidoreductase, E.C. 1.1.1.40)"(PubMedID : 23228551)@NADP-malic enzyme 4(PubMedID : 26465154)@NADP-malic enzyme(PubMedID : 26904072)@-(PubMedID : 26976818)@NADP-dependent malic enzyme(PubMedID : 27016024)@NADP-dependent malic enzyme, chloroplast precursor, putative, expressed K00029: E1.1.1.40, malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+)
15 Sobic.001G011400 CRAL/TRIO domain containing protein, expressed -
16 Sobic.003G372400 amidophosphoribosyltransferase, chloroplast precursor, putative, expressed K00764: purF, amidophosphoribosyltransferase
17 Sobic.010G104800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@caleosin related protein, putative, expressed K17991: peroxygenase
18 Sobic.008G129900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.009G256100 expressed protein -
20 Sobic.010G231300 glutamate receptor, putative, expressed K05387: glutamate receptor, ionotropic, plant


Gene co-expression network
sample Sobic002G219300 Sobic002G219300 Sobic003G042900 Sobic003G042900 Sobic002G219300--Sobic003G042900 Sobic006G093100 Sobic006G093100 Sobic002G219300--Sobic006G093100 Sobic002G196600 Sobic002G196600 Sobic002G219300--Sobic002G196600 Sobic004G215800 Sobic004G215800 Sobic002G219300--Sobic004G215800 Sobic010G173400 Sobic010G173400 Sobic002G219300--Sobic010G173400 Sobic002G404800 Sobic002G404800 Sobic002G219300--Sobic002G404800 Sobic002G390100 Sobic002G390100 Sobic002G219300--Sobic002G390100 Sobic004G165500 Sobic004G165500 Sobic002G219300--Sobic004G165500 Sobic005G039700 Sobic005G039700 Sobic002G219300--Sobic005G039700 Sobic003G042900--Sobic002G404800 Sobic003G042900--Sobic002G390100 Sobic001G073300 Sobic001G073300 Sobic003G042900--Sobic001G073300 Sobic009G256100 Sobic009G256100 Sobic003G042900--Sobic009G256100 Sobic003G042900--Sobic004G165500 Sobic010G104800 Sobic010G104800 Sobic003G042900--Sobic010G104800 Sobic003G042900--Sobic004G215800 Sobic008G033000 Sobic008G033000 Sobic003G042900--Sobic008G033000 Sobic008G129900 Sobic008G129900 Sobic003G042900--Sobic008G129900 Sobic006G093100--Sobic004G215800 Sobic006G093100--Sobic002G390100 Sobic003G036200 Sobic003G036200 Sobic006G093100--Sobic003G036200 Sobic006G093100--Sobic002G196600 Sobic007G105500 Sobic007G105500 Sobic006G093100--Sobic007G105500 Sobic008G033200 Sobic008G033200 Sobic006G093100--Sobic008G033200 Sobic006G093100--Sobic003G042900 Sobic006G093100--Sobic008G033000 Sobic006G093100--Sobic002G404800 Sobic002G196600--Sobic002G390100 Sobic002G196600--Sobic006G093100 Sobic010G231300 Sobic010G231300 Sobic002G196600--Sobic010G231300 Sobic002G196600--Sobic003G042900 Sobic002G196600--Sobic002G219300 Sobic002G196600--Sobic001G073300 Sobic001G244700 Sobic001G244700 Sobic002G196600--Sobic001G244700 Sobic002G196600--Sobic002G404800 Sobic006G161500 Sobic006G161500 Sobic002G196600--Sobic006G161500 Sobic004G215800--Sobic007G105500 Sobic004G215800--Sobic003G036200 Sobic003G185900 Sobic003G185900 Sobic004G215800--Sobic003G185900 Sobic003G367500 Sobic003G367500 Sobic004G215800--Sobic003G367500 Sobic004G215800--Sobic002G404800 Sobic004G215800--Sobic008G033000 Sobic004G215800--Sobic009G256100 Sobic003G097600 Sobic003G097600 Sobic004G215800--Sobic003G097600 Sobic004G112100 Sobic004G112100 Sobic004G215800--Sobic004G112100 Sobic010G173400--Sobic003G042900 Sobic001G011400 Sobic001G011400 Sobic010G173400--Sobic001G011400 Sobic003G409700 Sobic003G409700 Sobic010G173400--Sobic003G409700 Sobic010G173400--Sobic008G129900 Sobic010G173400--Sobic008G033000 Sobic010G173400--Sobic002G404800 Sobic002G402700 Sobic002G402700 Sobic010G173400--Sobic002G402700 Sobic010G173400--Sobic002G219300 Sobic010G173400--Sobic001G073300 Sobic002G404800--Sobic007G105500 Sobic002G404800--Sobic003G036200 Sobic002G404800--Sobic004G215800 Sobic005G101200 Sobic005G101200 Sobic002G404800--Sobic005G101200 Sobic002G404800--Sobic002G390100 Sobic002G404800--Sobic009G256100 Sobic002G404800--Sobic003G185900 Sobic002G404800--Sobic008G033000 Sobic002G404800--Sobic004G112100 Sobic002G390100--Sobic003G036200 Sobic002G390100--Sobic002G404800 Sobic002G390100--Sobic009G256100 Sobic005G068700 Sobic005G068700 Sobic002G390100--Sobic005G068700 Sobic002G390100--Sobic004G215800 Sobic002G390100--Sobic007G105500 Sobic002G390100--Sobic003G042900 Sobic002G390100--Sobic010G104800 Sobic002G390100--Sobic001G073300 Sobic004G165500--Sobic003G042900 Sobic004G165500--Sobic001G073300 Sobic004G165500--Sobic002G390100 Sobic004G165500--Sobic009G256100 Sobic004G165500--Sobic007G105500 Sobic004G165500--Sobic006G093100 Sobic004G165500--Sobic002G404800 Sobic004G165500--Sobic004G215800 Sobic004G165500--Sobic010G104800 Sobic005G039700--Sobic002G219300 Sobic004G312800 Sobic004G312800 Sobic005G039700--Sobic004G312800 Sobic005G039700--Sobic002G402700 Sobic003G391600 Sobic003G391600 Sobic005G039700--Sobic003G391600 Sobic005G039700--Sobic003G042900 Sobic005G039700--Sobic010G173400 Sobic002G314400 Sobic002G314400 Sobic005G039700--Sobic002G314400 Sobic002G183900 Sobic002G183900 Sobic005G039700--Sobic002G183900 Sobic005G039700--Sobic001G011400
Octagon: transcription factors


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