Gene annotation
Transcriptome id Sobic.003G042900.1
Synonym IAGLU, Sb03g003760
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed
UniProt C5XMP8
Pfam PF00201
Panther DB PTHR11926 PTHR11926:SF216
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016758; transferase activity, transferring hexosyl groups GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT4G15550 : indole-3-acetate beta-D-glucosyltransferase
RAP-DB (Rice) LOC_Os01g08440.1 : UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a007676 , Zm00025a035766 , Zm00025a028297 , Zm00025a015772 , Zm00025a023168 , Zm00025a044282 , Zm00025a008216 , Zm00025a043104
Brachypodium KQK17836 , KQJ88142 , KQK21606 , KQK21605 , PNT63441 , KQK03015 , KQJ93930 , KQK16107
Barley HORVU0Hr1G040210.6 , HORVU0Hr1G040210.5 , HORVU7Hr1G048170.4 , HORVU7Hr1G048170.1 , HORVU1Hr1G025870.2 , HORVU7Hr1G048170.2 , HORVU7Hr1G101710.1 , HORVU7Hr1G048170.3 , HORVU3Hr1G069890.5 , HORVU7Hr1G048200.1 , HORVU5Hr1G119830.1 , HORVU3Hr1G069890.4 , HORVU3Hr1G069890.3 , HORVU3Hr1G069890.2 , HORVU3Hr1G069890.1 , HORVU1Hr1G025870.1 , HORVU2Hr1G108790.1 , HORVU3Hr1G021810.3 , HORVU3Hr1G021810.2 , HORVU3Hr1G021810.1 , HORVU3Hr1G021810.6 , HORVU3Hr1G021810.5 , HORVU3Hr1G021810.4 , HORVU1Hr1G025870.3 , HORVU1Hr1G068800.1
Wheat TraesCS6D02G007500 , TraesCS4A02G279400 , TraesCS4D02G030900 , TraesCS4D02G030900 , TraesCS2B02G027900 , TraesCS3B02G282600 , TraesCS4B02G033000 , TraesCS4D02G031500
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.003G042900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G404800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mitochondrial carrier protein, putative, expressed K14684: solute carrier family 25 (mitochondrial phosphate transporter), member 23/24/25/41
2 Sobic.002G390100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.29 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07198: PRKAA, 5'-AMP-activated protein kinase, catalytic alpha subunit
3 Sobic.001G073300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methyltransferase, putative, expressed -
4 Sobic.009G256100 expressed protein -
5 Sobic.004G165500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.010G104800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@caleosin related protein, putative, expressed K17991: peroxygenase
7 Sobic.004G215800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed K04354: serine/threonine-protein phosphatase 2A regulatory subunit B
8 Sobic.008G033000 CAAX amino terminal protease family protein, putative, expressed K07052: uncharacterized protein
9 Sobic.008G129900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.003G036200 NADP-ME(PubMedID : 19549309)@"SbC4-NADP-ME (L-malate:NADP oxidoreductase, E.C. 1.1.1.40)"(PubMedID : 23228551)@NADP-malic enzyme 4(PubMedID : 26465154)@NADP-malic enzyme(PubMedID : 26904072)@-(PubMedID : 26976818)@NADP-dependent malic enzyme(PubMedID : 27016024)@NADP-dependent malic enzyme, chloroplast precursor, putative, expressed K00029: E1.1.1.40, malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+)
11 Sobic.007G105500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AGC_PVPK_like_kin82y.10 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
12 Sobic.002G219300 ZOS9-13 - C2H2 zinc finger protein, expressed -
13 Sobic.006G093100 ferric-chelate reductase, putative, expressed -
14 Sobic.002G402700 -(PubMedID : 26976818)@ferredoxin-dependent glutamate synthase, chloroplast precursor, putative, expressed K00284: GLU, glutamate synthase (ferredoxin)
15 Sobic.010G173400 down-regulated TF in developmental senescence(PubMedID : 27586543)@GATA zinc finger domain containing protein, expressed -
16 Sobic.002G196600 1-phosphatidylinositol-4-phosphate 5-kinase/ zinc ion binding protein, putative, expressed K00921: PIKFYVE, 1-phosphatidylinositol-3-phosphate 5-kinase
17 Sobic.010G231300 glutamate receptor, putative, expressed K05387: glutamate receptor, ionotropic, plant
18 Sobic.006G161500 elongation factor, putative, expressed K02355: fusA, GFM, elongation factor G
19 Sobic.004G112100 -(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsRhmbd6 - Putative Rhomboid homologue, expressed -
20 Sobic.001G244600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@KIP1, putative, expressed -


Gene co-expression network
sample Sobic003G042900 Sobic003G042900 Sobic002G404800 Sobic002G404800 Sobic003G042900--Sobic002G404800 Sobic002G390100 Sobic002G390100 Sobic003G042900--Sobic002G390100 Sobic001G073300 Sobic001G073300 Sobic003G042900--Sobic001G073300 Sobic009G256100 Sobic009G256100 Sobic003G042900--Sobic009G256100 Sobic004G165500 Sobic004G165500 Sobic003G042900--Sobic004G165500 Sobic010G104800 Sobic010G104800 Sobic003G042900--Sobic010G104800 Sobic004G215800 Sobic004G215800 Sobic003G042900--Sobic004G215800 Sobic008G033000 Sobic008G033000 Sobic003G042900--Sobic008G033000 Sobic008G129900 Sobic008G129900 Sobic003G042900--Sobic008G129900 Sobic007G105500 Sobic007G105500 Sobic002G404800--Sobic007G105500 Sobic003G036200 Sobic003G036200 Sobic002G404800--Sobic003G036200 Sobic002G404800--Sobic004G215800 Sobic005G101200 Sobic005G101200 Sobic002G404800--Sobic005G101200 Sobic002G404800--Sobic002G390100 Sobic002G404800--Sobic009G256100 Sobic003G185900 Sobic003G185900 Sobic002G404800--Sobic003G185900 Sobic002G404800--Sobic008G033000 Sobic004G112100 Sobic004G112100 Sobic002G404800--Sobic004G112100 Sobic002G390100--Sobic003G036200 Sobic002G390100--Sobic002G404800 Sobic002G390100--Sobic009G256100 Sobic005G068700 Sobic005G068700 Sobic002G390100--Sobic005G068700 Sobic002G390100--Sobic004G215800 Sobic002G390100--Sobic007G105500 Sobic002G390100--Sobic003G042900 Sobic002G390100--Sobic010G104800 Sobic002G390100--Sobic001G073300 Sobic001G073300--Sobic010G104800 Sobic006G161500 Sobic006G161500 Sobic001G073300--Sobic006G161500 Sobic001G073300--Sobic009G256100 Sobic001G244600 Sobic001G244600 Sobic001G073300--Sobic001G244600 Sobic003G409700 Sobic003G409700 Sobic001G073300--Sobic003G409700 Sobic001G073300--Sobic002G390100 Sobic010G231300 Sobic010G231300 Sobic001G073300--Sobic010G231300 Sobic001G073300--Sobic003G042900 Sobic001G073300--Sobic008G129900 Sobic009G256100--Sobic010G104800 Sobic006G153400 Sobic006G153400 Sobic009G256100--Sobic006G153400 Sobic009G256100--Sobic002G390100 Sobic007G058100 Sobic007G058100 Sobic009G256100--Sobic007G058100 Sobic009G256100--Sobic007G105500 Sobic009G256100--Sobic002G404800 Sobic009G256100--Sobic003G185900 Sobic009G256100--Sobic004G215800 Sobic009G256100--Sobic008G129900 Sobic004G165500--Sobic003G042900 Sobic004G165500--Sobic001G073300 Sobic004G165500--Sobic002G390100 Sobic004G165500--Sobic009G256100 Sobic004G165500--Sobic007G105500 Sobic006G093100 Sobic006G093100 Sobic004G165500--Sobic006G093100 Sobic004G165500--Sobic002G404800 Sobic004G165500--Sobic004G215800 Sobic004G165500--Sobic010G104800 Sobic010G104800--Sobic001G073300 Sobic010G104800--Sobic006G153400 Sobic010G104800--Sobic009G256100 Sobic007G006400 Sobic007G006400 Sobic010G104800--Sobic007G006400 Sobic010G104800--Sobic008G129900 Sobic010G104800--Sobic004G112100 Sobic010G104800--Sobic001G244600 Sobic010G104800--Sobic006G161500 Sobic010G104800--Sobic002G390100 Sobic004G215800--Sobic007G105500 Sobic004G215800--Sobic003G036200 Sobic004G215800--Sobic003G185900 Sobic003G367500 Sobic003G367500 Sobic004G215800--Sobic003G367500 Sobic004G215800--Sobic002G404800 Sobic004G215800--Sobic008G033000 Sobic004G215800--Sobic009G256100 Sobic003G097600 Sobic003G097600 Sobic004G215800--Sobic003G097600 Sobic004G215800--Sobic004G112100 Sobic008G033000--Sobic003G185900 Sobic008G033000--Sobic008G129900 Sobic001G258200 Sobic001G258200 Sobic008G033000--Sobic001G258200 Sobic001G504400 Sobic001G504400 Sobic008G033000--Sobic001G504400 Sobic001G217900 Sobic001G217900 Sobic008G033000--Sobic001G217900 Sobic010G125833 Sobic010G125833 Sobic008G033000--Sobic010G125833 Sobic002G206300 Sobic002G206300 Sobic008G033000--Sobic002G206300 Sobic008G033000--Sobic004G215800 Sobic009G038701 Sobic009G038701 Sobic008G033000--Sobic009G038701 Sobic008G129900--Sobic010G231300 Sobic008G129900--Sobic008G033000 Sobic008G129900--Sobic001G258200 Sobic008G129900--Sobic001G217900 Sobic006G235400 Sobic006G235400 Sobic008G129900--Sobic006G235400 Sobic008G129900--Sobic003G097600 Sobic001G263100 Sobic001G263100 Sobic008G129900--Sobic001G263100 Sobic008G129900--Sobic002G206300 Sobic003G341300 Sobic003G341300 Sobic008G129900--Sobic003G341300
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.