Gene annotation
Transcriptome id Sobic.002G196600.1
Synonym Sb02g024300, FAB1C
Functional annotation 1-phosphatidylinositol-4-phosphate 5-kinase/ zinc ion binding protein, putative, expressed
UniProt A0A1W0W508
Pfam PF00118 PF01504
Panther DB PTHR11353 PTHR11353:SF86
NCBI CDD -
KEGG Orthology K00921; PIKFYVE, 1-phosphatidylinositol-3-phosphate 5-kinase
Gene Ontology GO:0005524; ATP binding GO:0016307phosphatidylinositol phosphate kinase activity


Orthologs (automatic annotation)
TAIR AT1G71010 : FORMS APLOID AND BINUCLEATE CELLS 1C
RAP-DB (Rice) LOC_Os09g23740.1 : 1-phosphatidylinositol-4-phosphate 5-kinase/ zinc ion binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a046916 , Zm00025a005983
Brachypodium KQJ98349 , KQJ98350
Barley HORVU2Hr1G036380.2 , HORVU5Hr1G060810.10 , HORVU5Hr1G060810.11 , HORVU2Hr1G036380.6 , HORVU2Hr1G036380.7 , HORVU2Hr1G036380.4 , HORVU2Hr1G036380.5 , HORVU2Hr1G036380.3 , HORVU2Hr1G036380.1 , HORVU5Hr1G060810.6 , HORVU5Hr1G060810.7 , HORVU5Hr1G060810.4 , HORVU5Hr1G060810.5 , HORVU5Hr1G060810.2 , HORVU5Hr1G060810.3 , HORVU5Hr1G060810.1 , HORVU5Hr1G060810.8 , HORVU5Hr1G060810.9
Wheat TraesCS2A02G189500 , TraesCS2A02G189500 , TraesCS2A02G189500 , TraesCS5D02G211500 , TraesCS2A02G189500 , TraesCS2A02G189500 , TraesCS2B02G217700 , TraesCS2D02G198300 , TraesCS2D02G198300 , TraesCS2D02G198300 , TraesCS5A02G204600 , TraesCS5B02G203700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G390100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.29 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07198: PRKAA, 5'-AMP-activated protein kinase, catalytic alpha subunit
2 Sobic.006G093100 ferric-chelate reductase, putative, expressed -
3 Sobic.010G231300 glutamate receptor, putative, expressed K05387: glutamate receptor, ionotropic, plant
4 Sobic.003G042900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
5 Sobic.002G219300 ZOS9-13 - C2H2 zinc finger protein, expressed -
6 Sobic.001G073300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methyltransferase, putative, expressed -
7 Sobic.001G244700 RIO1 family protein, expressed K08851: TP53RK, PRPK, TP53 regulating kinase and related kinases
8 Sobic.002G404800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mitochondrial carrier protein, putative, expressed K14684: solute carrier family 25 (mitochondrial phosphate transporter), member 23/24/25/41
9 Sobic.006G161500 elongation factor, putative, expressed K02355: fusA, GFM, elongation factor G
10 Sobic.003G314000 jacalin-like lectin domain containing protein, expressed -
11 Sobic.009G194500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.001G244600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@KIP1, putative, expressed -
13 Sobic.004G322600 Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain(PubMedID : 26465154)@protein kinase domain containing protein, expressed -
14 Sobic.010G104800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@caleosin related protein, putative, expressed K17991: peroxygenase
15 Sobic.008G129900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.007G133000 1-phosphatidylinositol-4-phosphate 5-kinase/ zinc ion binding protein, putative, expressed K00921: PIKFYVE, 1-phosphatidylinositol-3-phosphate 5-kinase
17 Sobic.002G056500 with no lysine (K) kinase 1(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@STE_PAK_Ste20_Slob_Wnk.1 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08867: WNK, WNK lysine deficient protein kinase
18 Sobic.001G217900 PPR repeat domain containing protein, putative, expressed -
19 Sobic.006G214300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Putative leucine-rich repeatcontaining protein DDB_G0290503(PubMedID : 31721651)@- -
20 Sobic.005G068700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NAD kinase, putative, expressed K00858: ppnK, NAD+ kinase


Gene co-expression network
sample Sobic002G196600 Sobic002G196600 Sobic002G390100 Sobic002G390100 Sobic002G196600--Sobic002G390100 Sobic006G093100 Sobic006G093100 Sobic002G196600--Sobic006G093100 Sobic010G231300 Sobic010G231300 Sobic002G196600--Sobic010G231300 Sobic003G042900 Sobic003G042900 Sobic002G196600--Sobic003G042900 Sobic002G219300 Sobic002G219300 Sobic002G196600--Sobic002G219300 Sobic001G073300 Sobic001G073300 Sobic002G196600--Sobic001G073300 Sobic001G244700 Sobic001G244700 Sobic002G196600--Sobic001G244700 Sobic002G404800 Sobic002G404800 Sobic002G196600--Sobic002G404800 Sobic006G161500 Sobic006G161500 Sobic002G196600--Sobic006G161500 Sobic003G036200 Sobic003G036200 Sobic002G390100--Sobic003G036200 Sobic002G390100--Sobic002G404800 Sobic009G256100 Sobic009G256100 Sobic002G390100--Sobic009G256100 Sobic005G068700 Sobic005G068700 Sobic002G390100--Sobic005G068700 Sobic004G215800 Sobic004G215800 Sobic002G390100--Sobic004G215800 Sobic007G105500 Sobic007G105500 Sobic002G390100--Sobic007G105500 Sobic002G390100--Sobic003G042900 Sobic010G104800 Sobic010G104800 Sobic002G390100--Sobic010G104800 Sobic002G390100--Sobic001G073300 Sobic006G093100--Sobic004G215800 Sobic006G093100--Sobic002G390100 Sobic006G093100--Sobic003G036200 Sobic006G093100--Sobic002G196600 Sobic006G093100--Sobic007G105500 Sobic008G033200 Sobic008G033200 Sobic006G093100--Sobic008G033200 Sobic006G093100--Sobic003G042900 Sobic008G033000 Sobic008G033000 Sobic006G093100--Sobic008G033000 Sobic006G093100--Sobic002G404800 Sobic008G129900 Sobic008G129900 Sobic010G231300--Sobic008G129900 Sobic006G235400 Sobic006G235400 Sobic010G231300--Sobic006G235400 Sobic001G217900 Sobic001G217900 Sobic010G231300--Sobic001G217900 Sobic001G263100 Sobic001G263100 Sobic010G231300--Sobic001G263100 Sobic010G231300--Sobic006G161500 Sobic007G133000 Sobic007G133000 Sobic010G231300--Sobic007G133000 Sobic003G341300 Sobic003G341300 Sobic010G231300--Sobic003G341300 Sobic001G180200 Sobic001G180200 Sobic010G231300--Sobic001G180200 Sobic002G162400 Sobic002G162400 Sobic010G231300--Sobic002G162400 Sobic003G042900--Sobic002G404800 Sobic003G042900--Sobic002G390100 Sobic003G042900--Sobic001G073300 Sobic003G042900--Sobic009G256100 Sobic004G165500 Sobic004G165500 Sobic003G042900--Sobic004G165500 Sobic003G042900--Sobic010G104800 Sobic003G042900--Sobic004G215800 Sobic003G042900--Sobic008G033000 Sobic003G042900--Sobic008G129900 Sobic002G219300--Sobic003G042900 Sobic002G219300--Sobic006G093100 Sobic002G219300--Sobic002G196600 Sobic002G219300--Sobic004G215800 Sobic010G173400 Sobic010G173400 Sobic002G219300--Sobic010G173400 Sobic002G219300--Sobic002G404800 Sobic002G219300--Sobic002G390100 Sobic002G219300--Sobic004G165500 Sobic005G039700 Sobic005G039700 Sobic002G219300--Sobic005G039700 Sobic001G073300--Sobic010G104800 Sobic001G073300--Sobic006G161500 Sobic001G073300--Sobic009G256100 Sobic001G244600 Sobic001G244600 Sobic001G073300--Sobic001G244600 Sobic003G409700 Sobic003G409700 Sobic001G073300--Sobic003G409700 Sobic001G073300--Sobic002G390100 Sobic001G073300--Sobic010G231300 Sobic001G073300--Sobic003G042900 Sobic001G073300--Sobic008G129900 Sobic001G244700--Sobic002G404800 Sobic001G244700--Sobic002G196600 Sobic009G038900 Sobic009G038900 Sobic001G244700--Sobic009G038900 Sobic001G244700--Sobic001G244600 Sobic001G244700--Sobic001G217900 Sobic010G085100 Sobic010G085100 Sobic001G244700--Sobic010G085100 Sobic006G259800 Sobic006G259800 Sobic001G244700--Sobic006G259800 Sobic003G260100 Sobic003G260100 Sobic001G244700--Sobic003G260100 Sobic001G244700--Sobic008G033000 Sobic002G404800--Sobic007G105500 Sobic002G404800--Sobic003G036200 Sobic002G404800--Sobic004G215800 Sobic005G101200 Sobic005G101200 Sobic002G404800--Sobic005G101200 Sobic002G404800--Sobic002G390100 Sobic002G404800--Sobic009G256100 Sobic003G185900 Sobic003G185900 Sobic002G404800--Sobic003G185900 Sobic002G404800--Sobic008G033000 Sobic004G112100 Sobic004G112100 Sobic002G404800--Sobic004G112100 Sobic004G128900 Sobic004G128900 Sobic006G161500--Sobic004G128900 Sobic006G161500--Sobic010G231300 Sobic006G161500--Sobic003G409700 Sobic006G161500--Sobic006G235400 Sobic004G322600 Sobic004G322600 Sobic006G161500--Sobic004G322600 Sobic004G035100 Sobic004G035100 Sobic006G161500--Sobic004G035100 Sobic006G161500--Sobic001G073300 Sobic002G119100 Sobic002G119100 Sobic006G161500--Sobic002G119100 Sobic009G194500 Sobic009G194500 Sobic006G161500--Sobic009G194500
Octagon: transcription factors


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