Gene annotation
Transcriptome id Sobic.002G056500.3,Sobic.002G056500.2,Sobic.002G056500.4
Synonym ZIK4, Sb02g004750, ATWNK1, WNK1
Functional annotation with no lysine (K) kinase 1 (PubMedID : 26465154)
SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
STE_PAK_Ste20_Slob_Wnk.1 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed
UniProt A0A1W0W2F8 , A0A1B6Q9E1
Pfam PF00069
Panther DB PTHR13902 PTHR13902:SF59
NCBI CDD KOG0584; Serine/threonine protein kinase
KEGG Orthology K08867; WNK, WNK lysine deficient protein kinase
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT3G04910 : with no lysine (K) kinase 1
RAP-DB (Rice) LOC_Os07g38530.1 : STE_PAK_Ste20_Slob_Wnk.4 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed
MaizeGDB (Corn) Zm00025a045208 , Zm00025a033301
Brachypodium KQJ92553
Barley HORVU5Hr1G046590.6 , HORVU5Hr1G046590.5 , HORVU5Hr1G046590.3 , HORVU5Hr1G046590.7 , HORVU5Hr1G046590.4 , HORVU5Hr1G046590.2 , HORVU5Hr1G046590.1
Wheat TraesCS5D02G145100 , TraesCS2A02G195900 , TraesCS5B02G146100 , TraesCS2A02G195900 , TraesCS5A02G147500 , TraesCS2D02G203900 , TraesCS2D02G203900
Populus -


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cDNA sequences
Sobic.002G056500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G068700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NAD kinase, putative, expressed K00858: ppnK, NAD+ kinase
2 Sobic.008G129900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.005G101200 ELMO/CED-12 family protein, putative, expressed -
4 Sobic.001G258200 Ser/Thr protein phosphatase family protein, putative, expressed -
5 Sobic.003G314000 jacalin-like lectin domain containing protein, expressed -
6 Sobic.001G359300 cytochrome P450, putative, expressed -
7 Sobic.010G231300 glutamate receptor, putative, expressed K05387: glutamate receptor, ionotropic, plant
8 Sobic.007G105500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AGC_PVPK_like_kin82y.10 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
9 Sobic.003G036200 NADP-ME(PubMedID : 19549309)@"SbC4-NADP-ME (L-malate:NADP oxidoreductase, E.C. 1.1.1.40)"(PubMedID : 23228551)@NADP-malic enzyme 4(PubMedID : 26465154)@NADP-malic enzyme(PubMedID : 26904072)@-(PubMedID : 26976818)@NADP-dependent malic enzyme(PubMedID : 27016024)@NADP-dependent malic enzyme, chloroplast precursor, putative, expressed K00029: E1.1.1.40, malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+)
10 Sobic.009G194500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.002G404800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mitochondrial carrier protein, putative, expressed K14684: solute carrier family 25 (mitochondrial phosphate transporter), member 23/24/25/41
12 Sobic.003G047700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytokinin-O-glucosyltransferase 3, putative, expressed -
13 Sobic.003G185900 protein phosphatase 2C, putative, expressed -
14 Sobic.008G033000 CAAX amino terminal protease family protein, putative, expressed K07052: uncharacterized protein
15 Sobic.002G206300 tsi1-interacting protein TSIP1, putative, expressed -
16 Sobic.002G390100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.29 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07198: PRKAA, 5'-AMP-activated protein kinase, catalytic alpha subunit
17 Sobic.001G217900 PPR repeat domain containing protein, putative, expressed -
18 Sobic.002G162400 potassium channel protein, putative, expressed K05389: potassium channel subfamily K, other eukaryote
19 Sobic.009G038900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@CGMC_MAPKCGMC_2.1 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
20 Sobic.005G118400 expressed protein -


Gene co-expression network
sample Sobic002G056500 Sobic002G056500 Sobic005G068700 Sobic005G068700 Sobic002G056500--Sobic005G068700 Sobic008G129900 Sobic008G129900 Sobic002G056500--Sobic008G129900 Sobic005G101200 Sobic005G101200 Sobic002G056500--Sobic005G101200 Sobic001G258200 Sobic001G258200 Sobic002G056500--Sobic001G258200 Sobic003G314000 Sobic003G314000 Sobic002G056500--Sobic003G314000 Sobic001G359300 Sobic001G359300 Sobic002G056500--Sobic001G359300 Sobic010G231300 Sobic010G231300 Sobic002G056500--Sobic010G231300 Sobic007G105500 Sobic007G105500 Sobic002G056500--Sobic007G105500 Sobic003G036200 Sobic003G036200 Sobic002G056500--Sobic003G036200 Sobic005G068700--Sobic001G258200 Sobic005G068700--Sobic005G101200 Sobic003G185900 Sobic003G185900 Sobic005G068700--Sobic003G185900 Sobic005G068700--Sobic002G056500 Sobic005G068700--Sobic008G129900 Sobic008G033000 Sobic008G033000 Sobic005G068700--Sobic008G033000 Sobic001G217900 Sobic001G217900 Sobic005G068700--Sobic001G217900 Sobic002G390100 Sobic002G390100 Sobic005G068700--Sobic002G390100 Sobic002G206300 Sobic002G206300 Sobic005G068700--Sobic002G206300 Sobic008G129900--Sobic010G231300 Sobic008G129900--Sobic008G033000 Sobic008G129900--Sobic001G258200 Sobic008G129900--Sobic001G217900 Sobic006G235400 Sobic006G235400 Sobic008G129900--Sobic006G235400 Sobic003G097600 Sobic003G097600 Sobic008G129900--Sobic003G097600 Sobic001G263100 Sobic001G263100 Sobic008G129900--Sobic001G263100 Sobic008G129900--Sobic002G206300 Sobic003G341300 Sobic003G341300 Sobic008G129900--Sobic003G341300 Sobic004G189800 Sobic004G189800 Sobic005G101200--Sobic004G189800 Sobic005G101200--Sobic005G068700 Sobic002G404800 Sobic002G404800 Sobic005G101200--Sobic002G404800 Sobic005G101200--Sobic001G258200 Sobic009G038900 Sobic009G038900 Sobic005G101200--Sobic009G038900 Sobic005G101200--Sobic007G105500 Sobic005G101200--Sobic003G185900 Sobic010G085100 Sobic010G085100 Sobic005G101200--Sobic010G085100 Sobic004G281800 Sobic004G281800 Sobic005G101200--Sobic004G281800 Sobic001G258200--Sobic003G185900 Sobic002G382700 Sobic002G382700 Sobic001G258200--Sobic002G382700 Sobic001G258200--Sobic008G129900 Sobic001G504400 Sobic001G504400 Sobic001G258200--Sobic001G504400 Sobic001G258200--Sobic004G189800 Sobic001G258200--Sobic008G033000 Sobic001G258200--Sobic002G206300 Sobic001G258200--Sobic001G359300 Sobic001G258200--Sobic005G068700 Sobic009G194500 Sobic009G194500 Sobic003G314000--Sobic009G194500 Sobic003G314000--Sobic010G231300 Sobic003G314000--Sobic002G056500 Sobic003G314000--Sobic008G129900 Sobic002G119100 Sobic002G119100 Sobic003G314000--Sobic002G119100 Sobic001G244600 Sobic001G244600 Sobic003G314000--Sobic001G244600 Sobic004G322600 Sobic004G322600 Sobic003G314000--Sobic004G322600 Sobic010G104800 Sobic010G104800 Sobic003G314000--Sobic010G104800 Sobic006G161500 Sobic006G161500 Sobic003G314000--Sobic006G161500 Sobic001G077300 Sobic001G077300 Sobic001G359300--Sobic001G077300 Sobic001G359300--Sobic001G258200 Sobic009G093100 Sobic009G093100 Sobic001G359300--Sobic009G093100 Sobic001G333800 Sobic001G333800 Sobic001G359300--Sobic001G333800 Sobic001G359300--Sobic002G382700 Sobic009G073900 Sobic009G073900 Sobic001G359300--Sobic009G073900 Sobic003G073800 Sobic003G073800 Sobic001G359300--Sobic003G073800 Sobic006G090100 Sobic006G090100 Sobic001G359300--Sobic006G090100 Sobic001G359300--Sobic005G068700 Sobic010G231300--Sobic008G129900 Sobic010G231300--Sobic006G235400 Sobic010G231300--Sobic001G217900 Sobic010G231300--Sobic001G263100 Sobic010G231300--Sobic006G161500 Sobic007G133000 Sobic007G133000 Sobic010G231300--Sobic007G133000 Sobic010G231300--Sobic003G341300 Sobic001G180200 Sobic001G180200 Sobic010G231300--Sobic001G180200 Sobic002G162400 Sobic002G162400 Sobic010G231300--Sobic002G162400 Sobic004G215800 Sobic004G215800 Sobic007G105500--Sobic004G215800 Sobic007G105500--Sobic003G036200 Sobic007G105500--Sobic002G404800 Sobic007G105500--Sobic003G185900 Sobic003G367500 Sobic003G367500 Sobic007G105500--Sobic003G367500 Sobic007G105500--Sobic005G101200 Sobic009G256100 Sobic009G256100 Sobic007G105500--Sobic009G256100 Sobic007G105500--Sobic008G033000 Sobic007G105500--Sobic010G085100 Sobic003G036200--Sobic007G105500 Sobic003G036200--Sobic004G215800 Sobic003G036200--Sobic002G390100 Sobic003G036200--Sobic002G404800 Sobic003G036200--Sobic003G185900 Sobic003G036200--Sobic005G101200 Sobic003G036200--Sobic010G085100 Sobic003G036200--Sobic009G256100 Sobic008G033200 Sobic008G033200 Sobic003G036200--Sobic008G033200
Octagon: transcription factors


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