Gene annotation
Transcriptome id Sobic.003G154300.1
Synonym Sb03g013470, scpl33
Functional annotation OsSCP3 - Putative Serine Carboxypeptidase homologue, expressed
UniProt C5XJS0
Pfam PF00450
Panther DB PTHR11802 PTHR11802:SF55
NCBI CDD -
KEGG Orthology K16297; serine carboxypeptidase-like clade II
Gene Ontology GO:0006508; proteolysis GO:0004185serine-type carboxypeptidase activity


Orthologs (automatic annotation)
TAIR AT3G17180 : serine carboxypeptidase-like 33
RAP-DB (Rice) LOC_Os01g22980.1 : OsSCP3 - Putative Serine Carboxypeptidase homologue, expressed
MaizeGDB (Corn) Zm00025a024441 , Zm00025a036160
Brachypodium PNT70462 , KQK04225 , KQK04224 , PNT71740 , KQK07372 , KQK07370 , KQK07371
Barley HORVU3Hr1G087470.24 , HORVU3Hr1G087470.25 , HORVU3Hr1G087470.20 , HORVU3Hr1G087470.21 , HORVU3Hr1G087470.22 , HORVU3Hr1G033550.1 , HORVU3Hr1G033550.3 , HORVU3Hr1G033550.2 , HORVU3Hr1G033550.5 , HORVU3Hr1G033550.4 , HORVU3Hr1G033550.7 , HORVU3Hr1G033550.6 , HORVU3Hr1G033550.9 , HORVU3Hr1G033550.8 , HORVU3Hr1G033550.18 , HORVU3Hr1G087470.11 , HORVU3Hr1G087470.10 , HORVU3Hr1G087470.13 , HORVU3Hr1G087470.12 , HORVU3Hr1G087470.17 , HORVU3Hr1G087470.19 , HORVU3Hr1G087470.18 , HORVU3Hr1G033550.15 , HORVU3Hr1G033550.14 , HORVU3Hr1G033550.17 , HORVU3Hr1G033550.16 , HORVU3Hr1G033550.11 , HORVU3Hr1G033550.10 , HORVU3Hr1G033550.13 , HORVU3Hr1G033550.12 , HORVU3Hr1G087470.5 , HORVU3Hr1G087470.4 , HORVU3Hr1G087470.7 , HORVU3Hr1G087470.6 , HORVU3Hr1G087470.2 , HORVU3Hr1G087470.8
Wheat TraesCS3A02G352200 , TraesCS3D02G172900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G056500 with no lysine (K) kinase 1(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@STE_PAK_Ste20_Slob_Wnk.1 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08867: WNK, WNK lysine deficient protein kinase
2 Sobic.006G093100 ferric-chelate reductase, putative, expressed -
3 Sobic.008G129900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.002G402700 -(PubMedID : 26976818)@ferredoxin-dependent glutamate synthase, chloroplast precursor, putative, expressed K00284: GLU, glutamate synthase (ferredoxin)
5 Sobic.010G173400 down-regulated TF in developmental senescence(PubMedID : 27586543)@GATA zinc finger domain containing protein, expressed -
6 Sobic.010G231300 glutamate receptor, putative, expressed K05387: glutamate receptor, ionotropic, plant
7 Sobic.008G033000 CAAX amino terminal protease family protein, putative, expressed K07052: uncharacterized protein
8 Sobic.001G483300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.004G215800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed K04354: serine/threonine-protein phosphatase 2A regulatory subunit B
10 Sobic.003G372400 amidophosphoribosyltransferase, chloroplast precursor, putative, expressed K00764: purF, amidophosphoribosyltransferase
11 Sobic.003G097600 - -
12 Sobic.007G105500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AGC_PVPK_like_kin82y.10 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
13 Sobic.003G042900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
14 Sobic.003G010200 cytochrome P450, putative, expressed -
15 Sobic.007G006400 - -
16 Sobic.003G371250 - -
17 Sobic.010G104800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@caleosin related protein, putative, expressed K17991: peroxygenase
18 Sobic.003G314000 jacalin-like lectin domain containing protein, expressed -
19 Sobic.001G073300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methyltransferase, putative, expressed -
20 Sobic.002G404800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mitochondrial carrier protein, putative, expressed K14684: solute carrier family 25 (mitochondrial phosphate transporter), member 23/24/25/41


Gene co-expression network
sample Sobic003G154300 Sobic003G154300 Sobic002G056500 Sobic002G056500 Sobic003G154300--Sobic002G056500 Sobic006G093100 Sobic006G093100 Sobic003G154300--Sobic006G093100 Sobic008G129900 Sobic008G129900 Sobic003G154300--Sobic008G129900 Sobic002G402700 Sobic002G402700 Sobic003G154300--Sobic002G402700 Sobic010G173400 Sobic010G173400 Sobic003G154300--Sobic010G173400 Sobic010G231300 Sobic010G231300 Sobic003G154300--Sobic010G231300 Sobic008G033000 Sobic008G033000 Sobic003G154300--Sobic008G033000 Sobic001G483300 Sobic001G483300 Sobic003G154300--Sobic001G483300 Sobic004G215800 Sobic004G215800 Sobic003G154300--Sobic004G215800 Sobic005G068700 Sobic005G068700 Sobic002G056500--Sobic005G068700 Sobic002G056500--Sobic008G129900 Sobic005G101200 Sobic005G101200 Sobic002G056500--Sobic005G101200 Sobic001G258200 Sobic001G258200 Sobic002G056500--Sobic001G258200 Sobic003G314000 Sobic003G314000 Sobic002G056500--Sobic003G314000 Sobic001G359300 Sobic001G359300 Sobic002G056500--Sobic001G359300 Sobic002G056500--Sobic010G231300 Sobic007G105500 Sobic007G105500 Sobic002G056500--Sobic007G105500 Sobic003G036200 Sobic003G036200 Sobic002G056500--Sobic003G036200 Sobic006G093100--Sobic004G215800 Sobic002G390100 Sobic002G390100 Sobic006G093100--Sobic002G390100 Sobic006G093100--Sobic003G036200 Sobic002G196600 Sobic002G196600 Sobic006G093100--Sobic002G196600 Sobic006G093100--Sobic007G105500 Sobic008G033200 Sobic008G033200 Sobic006G093100--Sobic008G033200 Sobic003G042900 Sobic003G042900 Sobic006G093100--Sobic003G042900 Sobic006G093100--Sobic008G033000 Sobic002G404800 Sobic002G404800 Sobic006G093100--Sobic002G404800 Sobic008G129900--Sobic010G231300 Sobic008G129900--Sobic008G033000 Sobic008G129900--Sobic001G258200 Sobic001G217900 Sobic001G217900 Sobic008G129900--Sobic001G217900 Sobic006G235400 Sobic006G235400 Sobic008G129900--Sobic006G235400 Sobic003G097600 Sobic003G097600 Sobic008G129900--Sobic003G097600 Sobic001G263100 Sobic001G263100 Sobic008G129900--Sobic001G263100 Sobic002G206300 Sobic002G206300 Sobic008G129900--Sobic002G206300 Sobic003G341300 Sobic003G341300 Sobic008G129900--Sobic003G341300 Sobic002G402700--Sobic008G033000 Sobic002G402700--Sobic008G129900 Sobic002G402700--Sobic001G217900 Sobic002G402700--Sobic002G206300 Sobic001G504400 Sobic001G504400 Sobic002G402700--Sobic001G504400 Sobic005G001700 Sobic005G001700 Sobic002G402700--Sobic005G001700 Sobic001G540600 Sobic001G540600 Sobic002G402700--Sobic001G540600 Sobic002G402700--Sobic010G231300 Sobic001G378100 Sobic001G378100 Sobic002G402700--Sobic001G378100 Sobic010G173400--Sobic003G042900 Sobic001G011400 Sobic001G011400 Sobic010G173400--Sobic001G011400 Sobic003G409700 Sobic003G409700 Sobic010G173400--Sobic003G409700 Sobic010G173400--Sobic008G129900 Sobic010G173400--Sobic008G033000 Sobic010G173400--Sobic002G404800 Sobic010G173400--Sobic002G402700 Sobic002G219300 Sobic002G219300 Sobic010G173400--Sobic002G219300 Sobic001G073300 Sobic001G073300 Sobic010G173400--Sobic001G073300 Sobic010G231300--Sobic008G129900 Sobic010G231300--Sobic006G235400 Sobic010G231300--Sobic001G217900 Sobic010G231300--Sobic001G263100 Sobic006G161500 Sobic006G161500 Sobic010G231300--Sobic006G161500 Sobic007G133000 Sobic007G133000 Sobic010G231300--Sobic007G133000 Sobic010G231300--Sobic003G341300 Sobic001G180200 Sobic001G180200 Sobic010G231300--Sobic001G180200 Sobic002G162400 Sobic002G162400 Sobic010G231300--Sobic002G162400 Sobic003G185900 Sobic003G185900 Sobic008G033000--Sobic003G185900 Sobic008G033000--Sobic008G129900 Sobic008G033000--Sobic001G258200 Sobic008G033000--Sobic001G504400 Sobic008G033000--Sobic001G217900 Sobic010G125833 Sobic010G125833 Sobic008G033000--Sobic010G125833 Sobic008G033000--Sobic002G206300 Sobic008G033000--Sobic004G215800 Sobic009G038701 Sobic009G038701 Sobic008G033000--Sobic009G038701 Sobic002G183900 Sobic002G183900 Sobic001G483300--Sobic002G183900 Sobic001G483300--Sobic002G402700 Sobic001G483300--Sobic010G173400 Sobic001G483300--Sobic003G154300 Sobic001G483300--Sobic002G404800 Sobic001G483300--Sobic003G042900 Sobic001G483300--Sobic007G105500 Sobic001G483300--Sobic002G056500 Sobic003G355200 Sobic003G355200 Sobic001G483300--Sobic003G355200 Sobic004G215800--Sobic007G105500 Sobic004G215800--Sobic003G036200 Sobic004G215800--Sobic003G185900 Sobic003G367500 Sobic003G367500 Sobic004G215800--Sobic003G367500 Sobic004G215800--Sobic002G404800 Sobic004G215800--Sobic008G033000 Sobic009G256100 Sobic009G256100 Sobic004G215800--Sobic009G256100 Sobic004G215800--Sobic003G097600 Sobic004G112100 Sobic004G112100 Sobic004G215800--Sobic004G112100
Octagon: transcription factors


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