Gene annotation
Transcriptome id Sobic.003G010200.1
Synonym Sb03g001070, CYP71A25
Functional annotation cytochrome P450, putative, expressed
UniProt A0A1B6Q0V1
Pfam PF00067
Panther DB PTHR24298 PTHR24298:SF134
NCBI CDD KOG0156; Cytochrome P450 CYP2 subfamily
KEGG Orthology -
Gene Ontology GO:0016705; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0005506iron ion binding


Orthologs (automatic annotation)
TAIR AT3G48280 : cytochrome P450, family 71, subfamily A, polypeptide 25
RAP-DB (Rice) LOC_Os01g12740.1 : cytochrome P450, putative, expressed
MaizeGDB (Corn) Zm00025a022839 , Zm00025a035971 , Zm00025a035970
Brachypodium KQK03396
Barley HORVU3Hr1G030950.1
Wheat TraesCS3B02G179600 , TraesCS3B02G179500 , TraesCS3D02G160200 , TraesCS3D02G160300
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.003G010200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G258200 Ser/Thr protein phosphatase family protein, putative, expressed -
2 Sobic.008G033000 CAAX amino terminal protease family protein, putative, expressed K07052: uncharacterized protein
3 Sobic.001G504400 expressed protein -
4 Sobic.009G140300 MLO domain containing protein, putative, expressed K08472: mlo protein
5 Sobic.002G220900 expressed protein -
6 Sobic.006G102000 PAP fibrillin family domain containing protein, expressed -
7 Sobic.003G185900 protein phosphatase 2C, putative, expressed -
8 Sobic.009G062400 uvrB/uvrC motif family protein, expressed -
9 Sobic.010G067100 glutathione peroxidase, putative, expressed K00432: gpx, btuE, glutathione peroxidase
10 Sobic.006G158100 tRNA-dihydrouridine synthase, putative, expressed K05543: tRNA-dihydrouridine synthase 2
11 Sobic.010G181300 SOUL heme-binding protein, putative, expressed -
12 Sobic.003G094100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.003G097600 - -
14 Sobic.006G101500 expressed protein -
15 Sobic.007G105500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AGC_PVPK_like_kin82y.10 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
16 Sobic.009G207900 expressed protein -
17 Sobic.009G129300 heat shock protein DnaJ, putative, expressed -
18 Sobic.001G491000 ribulose-phosphate 3-epimerase, chloroplast precursor, putative, expressed K01783: rpe, ribulose-phosphate 3-epimerase
19 Sobic.008G129900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.009G237000 OsDegp9 - Putative Deg protease homologue, expressed -


Gene co-expression network
sample Sobic003G010200 Sobic003G010200 Sobic001G258200 Sobic001G258200 Sobic003G010200--Sobic001G258200 Sobic008G033000 Sobic008G033000 Sobic003G010200--Sobic008G033000 Sobic001G504400 Sobic001G504400 Sobic003G010200--Sobic001G504400 Sobic009G140300 Sobic009G140300 Sobic003G010200--Sobic009G140300 Sobic002G220900 Sobic002G220900 Sobic003G010200--Sobic002G220900 Sobic006G102000 Sobic006G102000 Sobic003G010200--Sobic006G102000 Sobic003G185900 Sobic003G185900 Sobic003G010200--Sobic003G185900 Sobic009G062400 Sobic009G062400 Sobic003G010200--Sobic009G062400 Sobic010G067100 Sobic010G067100 Sobic003G010200--Sobic010G067100 Sobic001G258200--Sobic003G185900 Sobic002G382700 Sobic002G382700 Sobic001G258200--Sobic002G382700 Sobic008G129900 Sobic008G129900 Sobic001G258200--Sobic008G129900 Sobic001G258200--Sobic001G504400 Sobic004G189800 Sobic004G189800 Sobic001G258200--Sobic004G189800 Sobic001G258200--Sobic008G033000 Sobic002G206300 Sobic002G206300 Sobic001G258200--Sobic002G206300 Sobic001G359300 Sobic001G359300 Sobic001G258200--Sobic001G359300 Sobic005G068700 Sobic005G068700 Sobic001G258200--Sobic005G068700 Sobic008G033000--Sobic003G185900 Sobic008G033000--Sobic008G129900 Sobic008G033000--Sobic001G258200 Sobic008G033000--Sobic001G504400 Sobic001G217900 Sobic001G217900 Sobic008G033000--Sobic001G217900 Sobic010G125833 Sobic010G125833 Sobic008G033000--Sobic010G125833 Sobic008G033000--Sobic002G206300 Sobic004G215800 Sobic004G215800 Sobic008G033000--Sobic004G215800 Sobic009G038701 Sobic009G038701 Sobic008G033000--Sobic009G038701 Sobic001G504400--Sobic002G206300 Sobic007G103400 Sobic007G103400 Sobic001G504400--Sobic007G103400 Sobic001G504400--Sobic009G038701 Sobic001G504400--Sobic003G185900 Sobic001G504400--Sobic001G258200 Sobic001G504400--Sobic010G125833 Sobic001G504400--Sobic008G033000 Sobic001G180200 Sobic001G180200 Sobic001G504400--Sobic001G180200 Sobic001G378100 Sobic001G378100 Sobic001G504400--Sobic001G378100 Sobic010G181300 Sobic010G181300 Sobic009G140300--Sobic010G181300 Sobic003G431700 Sobic003G431700 Sobic009G140300--Sobic003G431700 Sobic004G303200 Sobic004G303200 Sobic009G140300--Sobic004G303200 Sobic007G225500 Sobic007G225500 Sobic009G140300--Sobic007G225500 Sobic009G140300--Sobic006G102000 Sobic006G207800 Sobic006G207800 Sobic009G140300--Sobic006G207800 Sobic002G233700 Sobic002G233700 Sobic009G140300--Sobic002G233700 Sobic001G491000 Sobic001G491000 Sobic009G140300--Sobic001G491000 Sobic001G289500 Sobic001G289500 Sobic009G140300--Sobic001G289500 Sobic003G398800 Sobic003G398800 Sobic002G220900--Sobic003G398800 Sobic002G220900--Sobic008G033000 Sobic002G220900--Sobic007G103400 Sobic002G220900--Sobic001G504400 Sobic007G009200 Sobic007G009200 Sobic002G220900--Sobic007G009200 Sobic009G237100 Sobic009G237100 Sobic002G220900--Sobic009G237100 Sobic002G220900--Sobic003G185900 Sobic005G204200 Sobic005G204200 Sobic002G220900--Sobic005G204200 Sobic010G035400 Sobic010G035400 Sobic002G220900--Sobic010G035400 Sobic007G108900 Sobic007G108900 Sobic006G102000--Sobic007G108900 Sobic009G237000 Sobic009G237000 Sobic006G102000--Sobic009G237000 Sobic006G102000--Sobic001G289500 Sobic003G094100 Sobic003G094100 Sobic006G102000--Sobic003G094100 Sobic006G102000--Sobic010G181300 Sobic002G275300 Sobic002G275300 Sobic006G102000--Sobic002G275300 Sobic006G102000--Sobic001G491000 Sobic006G102000--Sobic006G207800 Sobic006G102000--Sobic004G303200 Sobic003G185900--Sobic008G033000 Sobic003G185900--Sobic001G504400 Sobic003G185900--Sobic001G258200 Sobic003G185900--Sobic010G067100 Sobic007G105500 Sobic007G105500 Sobic003G185900--Sobic007G105500 Sobic003G185900--Sobic004G215800 Sobic003G185900--Sobic005G068700 Sobic003G185900--Sobic009G038701 Sobic003G036200 Sobic003G036200 Sobic003G185900--Sobic003G036200 Sobic008G006100 Sobic008G006100 Sobic009G062400--Sobic008G006100 Sobic002G112400 Sobic002G112400 Sobic009G062400--Sobic002G112400 Sobic009G207900 Sobic009G207900 Sobic009G062400--Sobic009G207900 Sobic009G219100 Sobic009G219100 Sobic009G062400--Sobic009G219100 Sobic003G037300 Sobic003G037300 Sobic009G062400--Sobic003G037300 Sobic004G154400 Sobic004G154400 Sobic009G062400--Sobic004G154400 Sobic001G286600 Sobic001G286600 Sobic009G062400--Sobic001G286600 Sobic003G345500 Sobic003G345500 Sobic009G062400--Sobic003G345500 Sobic003G284800 Sobic003G284800 Sobic009G062400--Sobic003G284800 Sobic010G067100--Sobic003G185900 Sobic010G067100--Sobic001G504400 Sobic010G067100--Sobic003G398800 Sobic010G067100--Sobic001G258200 Sobic010G067100--Sobic007G105500 Sobic006G158100 Sobic006G158100 Sobic010G067100--Sobic006G158100 Sobic010G067100--Sobic002G206300 Sobic010G067100--Sobic009G038701 Sobic010G067100--Sobic008G033000
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.