Gene annotation
Transcriptome id Sobic.003G371250.1
Synonym -
Functional annotation -
UniProt A0A1W0W0S0
Pfam PF00854
Panther DB PTHR11654 PTHR11654:SF164
NCBI CDD KOG1237; H+/oligopeptide symporter
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0005215transporter activity


Orthologs (automatic annotation)
TAIR AT1G22540 : Major facilitator superfamily protein
RAP-DB (Rice) LOC_Os01g65190.1 : POT domain containing peptide transporter, putative, expressed
MaizeGDB (Corn) Zm00025a043865 , Zm00025a026646 , Zm00025a026638 , Zm00025a026637 , Zm00025a026647
Brachypodium KQK10760 , KQK06085 , KQK06084 , KQK10818 , PNT73275 , PNT73274 , KQK10815
Barley HORVU3Hr1G082490.1 , HORVU3Hr1G082490.2 , HORVU3Hr1G082490.3 , HORVU3Hr1G082490.4 , HORVU3Hr1G082490.5 , HORVU3Hr1G082490.7 , HORVU3Hr1G082490.9 , HORVU3Hr1G082440.3 , HORVU3Hr1G082440.2 , HORVU3Hr1G082440.1 , HORVU3Hr1G082440.6 , HORVU3Hr1G082440.5 , HORVU3Hr1G082440.4 , HORVU3Hr1G082580.10 , HORVU3Hr1G082580.11 , HORVU3Hr1G082580.12 , HORVU3Hr1G082580.13 , HORVU3Hr1G082580.8 , HORVU3Hr1G082580.9 , HORVU3Hr1G082580.2 , HORVU3Hr1G082580.3 , HORVU3Hr1G082580.1 , HORVU3Hr1G082580.6 , HORVU3Hr1G082580.7 , HORVU3Hr1G082580.4 , HORVU3Hr1G082580.5 , HORVU1Hr1G074550.6 , HORVU1Hr1G074550.7 , HORVU1Hr1G074550.4 , HORVU1Hr1G074550.5 , HORVU1Hr1G074550.2 , HORVU1Hr1G074550.3 , HORVU1Hr1G074550.1 , HORVU1Hr1G074550.8 , HORVU1Hr1G074550.9 , HORVU3Hr1G082490.12 , HORVU3Hr1G082490.13 , HORVU3Hr1G082490.10 , HORVU3Hr1G082490.11 , HORVU3Hr1G082490.16 , HORVU3Hr1G082490.14 , HORVU3Hr1G082490.15
Wheat TraesCS3D02G375600 , TraesCS3A02G382300 , TraesCS3B02G415000 , TraesCS1A02G269600 , TraesCS3A02G382600 , TraesCS3B02G415100 , TraesCS1B02G280100 , TraesCS3D02G375500 , TraesCS3B02G415200 , TraesCS3D02G375800 , TraesCS3D02G375700 , TraesCS3B02G415300 , TraesCS3A02G382400 , TraesCS3A02G382100 , TraesCS1D02G269700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G089600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Sucrose phosphate synthase genes(PubMedID : 24456189)@sucrose phosphate synthase(PubMedID : 26616172)@Sugar synthesis(PubMedID : 27330561)@sucrose-phosphate synthase, putative, expressed K00696: sucrose-phosphate synthase
2 Sobic.003G097600 - -
3 Sobic.004G202200 elongation factor Tu, putative, expressed K02358: tuf, elongation factor Tu
4 Sobic.002G306800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@monooxygenase, putative, expressed -
5 Sobic.001G180200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxisomal membrane protein, putative, expressed K13348: protein Mpv17
6 Sobic.003G094100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.007G006400 - -
8 Sobic.008G129900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.001G289500 kinase, pfkB family, putative, expressed -
10 Sobic.003G372400 amidophosphoribosyltransferase, chloroplast precursor, putative, expressed K00764: purF, amidophosphoribosyltransferase
11 Sobic.002G162400 potassium channel protein, putative, expressed K05389: potassium channel subfamily K, other eukaryote
12 Sobic.007G058001 - K15429: TRM5, tRNA (guanine37-N1)-methyltransferase
13 Sobic.005G217000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Os11bglu36 SFR2 homologue, expressed -
14 Sobic.003G341300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.002G005600 Aldolase-type TIM barrel family protein(PubMedID : 26465154)@SOR/SNZ family protein, putative, expressed K06215: pdxS, pyridoxal 5'-phosphate synthase pdxS subunit
16 Sobic.007G135800 ATP-dependent Clp protease adaptor protein ClpS containing protein, expressed K06891: ATP-dependent Clp protease adaptor protein ClpS
17 Sobic.002G206300 tsi1-interacting protein TSIP1, putative, expressed -
18 Sobic.002G382700 heat shock protein DnaJ, putative, expressed -
19 Sobic.009G133700 expressed protein -
20 Sobic.001G491000 ribulose-phosphate 3-epimerase, chloroplast precursor, putative, expressed K01783: rpe, ribulose-phosphate 3-epimerase


Gene co-expression network
sample Sobic003G371250 Sobic003G371250 Sobic005G089600 Sobic005G089600 Sobic003G371250--Sobic005G089600 Sobic003G097600 Sobic003G097600 Sobic003G371250--Sobic003G097600 Sobic004G202200 Sobic004G202200 Sobic003G371250--Sobic004G202200 Sobic002G306800 Sobic002G306800 Sobic003G371250--Sobic002G306800 Sobic001G180200 Sobic001G180200 Sobic003G371250--Sobic001G180200 Sobic003G094100 Sobic003G094100 Sobic003G371250--Sobic003G094100 Sobic007G006400 Sobic007G006400 Sobic003G371250--Sobic007G006400 Sobic008G129900 Sobic008G129900 Sobic003G371250--Sobic008G129900 Sobic001G289500 Sobic001G289500 Sobic003G371250--Sobic001G289500 Sobic003G431700 Sobic003G431700 Sobic005G089600--Sobic003G431700 Sobic003G367500 Sobic003G367500 Sobic005G089600--Sobic003G367500 Sobic008G053200 Sobic008G053200 Sobic005G089600--Sobic008G053200 Sobic003G398800 Sobic003G398800 Sobic005G089600--Sobic003G398800 Sobic002G324500 Sobic002G324500 Sobic005G089600--Sobic002G324500 Sobic003G431900 Sobic003G431900 Sobic005G089600--Sobic003G431900 Sobic001G519800 Sobic001G519800 Sobic005G089600--Sobic001G519800 Sobic002G036000 Sobic002G036000 Sobic005G089600--Sobic002G036000 Sobic005G089600--Sobic003G371250 Sobic003G097600--Sobic008G129900 Sobic003G097600--Sobic007G006400 Sobic004G215800 Sobic004G215800 Sobic003G097600--Sobic004G215800 Sobic003G185900 Sobic003G185900 Sobic003G097600--Sobic003G185900 Sobic008G033000 Sobic008G033000 Sobic003G097600--Sobic008G033000 Sobic004G112100 Sobic004G112100 Sobic003G097600--Sobic004G112100 Sobic004G082300 Sobic004G082300 Sobic003G097600--Sobic004G082300 Sobic009G038701 Sobic009G038701 Sobic003G097600--Sobic009G038701 Sobic001G258200 Sobic001G258200 Sobic003G097600--Sobic001G258200 Sobic004G202200--Sobic001G289500 Sobic006G235350 Sobic006G235350 Sobic004G202200--Sobic006G235350 Sobic006G140500 Sobic006G140500 Sobic004G202200--Sobic006G140500 Sobic009G133700 Sobic009G133700 Sobic004G202200--Sobic009G133700 Sobic001G029600 Sobic001G029600 Sobic004G202200--Sobic001G029600 Sobic004G202200--Sobic003G094100 Sobic003G005000 Sobic003G005000 Sobic004G202200--Sobic003G005000 Sobic001G015200 Sobic001G015200 Sobic004G202200--Sobic001G015200 Sobic007G181400 Sobic007G181400 Sobic004G202200--Sobic007G181400 Sobic002G306800--Sobic003G005000 Sobic002G306800--Sobic001G289500 Sobic003G341300 Sobic003G341300 Sobic002G306800--Sobic003G341300 Sobic007G157300 Sobic007G157300 Sobic002G306800--Sobic007G157300 Sobic002G382700 Sobic002G382700 Sobic002G306800--Sobic002G382700 Sobic002G306800--Sobic003G094100 Sobic001G283100 Sobic001G283100 Sobic002G306800--Sobic001G283100 Sobic004G035900 Sobic004G035900 Sobic002G306800--Sobic004G035900 Sobic002G306800--Sobic004G202200 Sobic001G180200--Sobic003G341300 Sobic002G206300 Sobic002G206300 Sobic001G180200--Sobic002G206300 Sobic007G135800 Sobic007G135800 Sobic001G180200--Sobic007G135800 Sobic001G180200--Sobic009G038701 Sobic009G207900 Sobic009G207900 Sobic001G180200--Sobic009G207900 Sobic001G180200--Sobic003G094100 Sobic001G504400 Sobic001G504400 Sobic001G180200--Sobic001G504400 Sobic001G263100 Sobic001G263100 Sobic001G180200--Sobic001G263100 Sobic002G162400 Sobic002G162400 Sobic001G180200--Sobic002G162400 Sobic007G108900 Sobic007G108900 Sobic003G094100--Sobic007G108900 Sobic001G509200 Sobic001G509200 Sobic003G094100--Sobic001G509200 Sobic003G094100--Sobic007G135800 Sobic001G393300 Sobic001G393300 Sobic003G094100--Sobic001G393300 Sobic003G094100--Sobic001G283100 Sobic003G094100--Sobic007G157300 Sobic004G103300 Sobic004G103300 Sobic003G094100--Sobic004G103300 Sobic003G094100--Sobic001G180200 Sobic002G298800 Sobic002G298800 Sobic003G094100--Sobic002G298800 Sobic007G006400--Sobic003G097600 Sobic010G104800 Sobic010G104800 Sobic007G006400--Sobic010G104800 Sobic006G153400 Sobic006G153400 Sobic007G006400--Sobic006G153400 Sobic007G006400--Sobic008G129900 Sobic007G006400--Sobic004G112100 Sobic007G006400--Sobic004G082300 Sobic009G256100 Sobic009G256100 Sobic007G006400--Sobic009G256100 Sobic004G059800 Sobic004G059800 Sobic007G006400--Sobic004G059800 Sobic003G127800 Sobic003G127800 Sobic007G006400--Sobic003G127800 Sobic010G231300 Sobic010G231300 Sobic008G129900--Sobic010G231300 Sobic008G129900--Sobic008G033000 Sobic008G129900--Sobic001G258200 Sobic001G217900 Sobic001G217900 Sobic008G129900--Sobic001G217900 Sobic006G235400 Sobic006G235400 Sobic008G129900--Sobic006G235400 Sobic008G129900--Sobic003G097600 Sobic008G129900--Sobic001G263100 Sobic008G129900--Sobic002G206300 Sobic008G129900--Sobic003G341300 Sobic001G289500--Sobic003G005000 Sobic001G491000 Sobic001G491000 Sobic001G289500--Sobic001G491000 Sobic001G289500--Sobic004G202200 Sobic006G238200 Sobic006G238200 Sobic001G289500--Sobic006G238200 Sobic006G102000 Sobic006G102000 Sobic001G289500--Sobic006G102000 Sobic010G181300 Sobic010G181300 Sobic001G289500--Sobic010G181300 Sobic001G289500--Sobic007G108900 Sobic001G289500--Sobic003G094100 Sobic002G275300 Sobic002G275300 Sobic001G289500--Sobic002G275300
Octagon: transcription factors


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