Gene annotation
Transcriptome id Sobic.004G283700.1
Synonym PP2-A13, AtPP2-A13, Sb04g032000
Functional annotation OsFBX58 - F-box domain containing protein, expressed
UniProt A0A194YT57
Pfam PF14299
Panther DB PTHR31960 PTHR31960:SF8
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G61060 : phloem protein 2-A13
RAP-DB (Rice) LOC_Os02g45320.1 : OsFBX58 - F-box domain containing protein, expressed
MaizeGDB (Corn) Zm00025a021054 , Zm00025a010160 , Zm00025a032309
Brachypodium KQJ84118 , PNT69228 , KQK00748 , KQK00749 , KQK00750
Barley -
Wheat TraesCS6A02G256100 , TraesCS6D02G237300 , TraesCS6B02G269300
Populus -


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cDNA sequences
Sobic.004G283700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G271500 phosphomannomutase, putative, expressed K17497: phosphomannomutase
2 Sobic.007G137600 NADP-dependent malate dehydrogenase(PubMedID : 26976818)@lactate/malate dehydrogenase, putative, expressed K00026: malate dehydrogenase
3 Sobic.005G133900 TPR repeat region family protein, expressed -
4 Sobic.003G253800 OsFBT1 - F-box and tubby domain containing protein, expressed -
5 Sobic.004G279100 CAMK_CAMK_like.15 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
6 Sobic.002G408300 OsFBT11 - F-box and tubby domain containing protein, expressed -
7 Sobic.003G373600 -(PubMedID : 26976818)@serine hydroxymethyltransferase, mitochondrial precursor, putative, expressed K00600: glyA, glycine hydroxymethyltransferase
8 Sobic.006G178000 coiled-coil domain-containing protein 124, putative, expressed -
9 Sobic.004G238100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09874: aquaporin NIP
10 Sobic.005G036800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@calmodulin-binding protein, putative, expressed -
11 Sobic.009G180500 Myb-like DNA-binding domain containing protein, putative, expressed -
12 Sobic.003G112900 expressed protein -
13 Sobic.003G369500 NPL4, putative, expressed K14015: NPLOC4, nuclear protein localization protein 4 homolog
14 Sobic.009G250900 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
15 Sobic.002G257200 uridine/cytidine kinase-like 1, putative, expressed K00876: udk, uridine kinase
16 Sobic.010G165200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.001G357300 cystathionine gamma-synthase, putative, expressed K01739: cystathionine gamma-synthase
18 Sobic.004G058200 cytidylyltransferase domain containing protein, expressed K00968: choline-phosphate cytidylyltransferase
19 Sobic.010G019300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydrolase, NUDIX family, domain containing protein, expressed K18447: ADP-sugar diphosphatase
20 Sobic.009G200800 protein kinase domain containing protein, expressed -


Gene co-expression network
sample Sobic004G283700 Sobic004G283700 Sobic006G271500 Sobic006G271500 Sobic004G283700--Sobic006G271500 Sobic007G137600 Sobic007G137600 Sobic004G283700--Sobic007G137600 Sobic005G133900 Sobic005G133900 Sobic004G283700--Sobic005G133900 Sobic003G253800 Sobic003G253800 Sobic004G283700--Sobic003G253800 Sobic004G279100 Sobic004G279100 Sobic004G283700--Sobic004G279100 Sobic002G408300 Sobic002G408300 Sobic004G283700--Sobic002G408300 Sobic003G373600 Sobic003G373600 Sobic004G283700--Sobic003G373600 Sobic006G178000 Sobic006G178000 Sobic004G283700--Sobic006G178000 Sobic004G238100 Sobic004G238100 Sobic004G283700--Sobic004G238100 Sobic002G230600 Sobic002G230600 Sobic006G271500--Sobic002G230600 Sobic002G128900 Sobic002G128900 Sobic006G271500--Sobic002G128900 Sobic006G271500--Sobic004G238100 Sobic009G155300 Sobic009G155300 Sobic006G271500--Sobic009G155300 Sobic004G121300 Sobic004G121300 Sobic006G271500--Sobic004G121300 Sobic001G261545 Sobic001G261545 Sobic006G271500--Sobic001G261545 Sobic010G050800 Sobic010G050800 Sobic006G271500--Sobic010G050800 Sobic001G085600 Sobic001G085600 Sobic006G271500--Sobic001G085600 Sobic008G037800 Sobic008G037800 Sobic006G271500--Sobic008G037800 Sobic004G057200 Sobic004G057200 Sobic007G137600--Sobic004G057200 Sobic006G175900 Sobic006G175900 Sobic007G137600--Sobic006G175900 Sobic003G373500 Sobic003G373500 Sobic007G137600--Sobic003G373500 Sobic002G358400 Sobic002G358400 Sobic007G137600--Sobic002G358400 Sobic001G357300 Sobic001G357300 Sobic007G137600--Sobic001G357300 Sobic010G027000 Sobic010G027000 Sobic007G137600--Sobic010G027000 Sobic007G137600--Sobic006G178000 Sobic007G137600--Sobic004G121300 Sobic001G082000 Sobic001G082000 Sobic007G137600--Sobic001G082000 Sobic002G363100 Sobic002G363100 Sobic005G133900--Sobic002G363100 Sobic005G133900--Sobic004G057200 Sobic003G244200 Sobic003G244200 Sobic005G133900--Sobic003G244200 Sobic005G133900--Sobic001G357300 Sobic009G093200 Sobic009G093200 Sobic005G133900--Sobic009G093200 Sobic003G216500 Sobic003G216500 Sobic005G133900--Sobic003G216500 Sobic002G133800 Sobic002G133800 Sobic005G133900--Sobic002G133800 Sobic006G002201 Sobic006G002201 Sobic005G133900--Sobic006G002201 Sobic009G240900 Sobic009G240900 Sobic005G133900--Sobic009G240900 Sobic004G060600 Sobic004G060600 Sobic003G253800--Sobic004G060600 Sobic006G054500 Sobic006G054500 Sobic003G253800--Sobic006G054500 Sobic001G162100 Sobic001G162100 Sobic003G253800--Sobic001G162100 Sobic001G128100 Sobic001G128100 Sobic003G253800--Sobic001G128100 Sobic002G431600 Sobic002G431600 Sobic003G253800--Sobic002G431600 Sobic007G079700 Sobic007G079700 Sobic003G253800--Sobic007G079700 Sobic001G283500 Sobic001G283500 Sobic003G253800--Sobic001G283500 Sobic010G267500 Sobic010G267500 Sobic003G253800--Sobic010G267500 Sobic005G095900 Sobic005G095900 Sobic003G253800--Sobic005G095900 Sobic003G113800 Sobic003G113800 Sobic004G279100--Sobic003G113800 Sobic006G156300 Sobic006G156300 Sobic004G279100--Sobic006G156300 Sobic002G134600 Sobic002G134600 Sobic004G279100--Sobic002G134600 Sobic002G235300 Sobic002G235300 Sobic004G279100--Sobic002G235300 Sobic010G009800 Sobic010G009800 Sobic004G279100--Sobic010G009800 Sobic003G316700 Sobic003G316700 Sobic004G279100--Sobic003G316700 Sobic007G165900 Sobic007G165900 Sobic004G279100--Sobic007G165900 Sobic005G036800 Sobic005G036800 Sobic004G279100--Sobic005G036800 Sobic002G257200 Sobic002G257200 Sobic004G279100--Sobic002G257200 Sobic002G408300--Sobic003G373600 Sobic006G261300 Sobic006G261300 Sobic002G408300--Sobic006G261300 Sobic002G408300--Sobic006G178000 Sobic001G143000 Sobic001G143000 Sobic002G408300--Sobic001G143000 Sobic003G157900 Sobic003G157900 Sobic002G408300--Sobic003G157900 Sobic002G408300--Sobic002G128900 Sobic008G077600 Sobic008G077600 Sobic002G408300--Sobic008G077600 Sobic004G324100 Sobic004G324100 Sobic002G408300--Sobic004G324100 Sobic008G089900 Sobic008G089900 Sobic002G408300--Sobic008G089900 Sobic003G373600--Sobic003G157900 Sobic005G062700 Sobic005G062700 Sobic003G373600--Sobic005G062700 Sobic003G425300 Sobic003G425300 Sobic003G373600--Sobic003G425300 Sobic003G381700 Sobic003G381700 Sobic003G373600--Sobic003G381700 Sobic005G172400 Sobic005G172400 Sobic003G373600--Sobic005G172400 Sobic001G276300 Sobic001G276300 Sobic003G373600--Sobic001G276300 Sobic007G079400 Sobic007G079400 Sobic003G373600--Sobic007G079400 Sobic008G077500 Sobic008G077500 Sobic003G373600--Sobic008G077500 Sobic008G187100 Sobic008G187100 Sobic003G373600--Sobic008G187100 Sobic003G369500 Sobic003G369500 Sobic006G178000--Sobic003G369500 Sobic006G178000--Sobic010G267500 Sobic006G178000--Sobic007G137600 Sobic003G279200 Sobic003G279200 Sobic006G178000--Sobic003G279200 Sobic010G026925 Sobic010G026925 Sobic006G178000--Sobic010G026925 Sobic003G402600 Sobic003G402600 Sobic006G178000--Sobic003G402600 Sobic006G178000--Sobic004G057200 Sobic006G178000--Sobic001G082000 Sobic003G308400 Sobic003G308400 Sobic006G178000--Sobic003G308400 Sobic001G142800 Sobic001G142800 Sobic004G238100--Sobic001G142800 Sobic005G091300 Sobic005G091300 Sobic004G238100--Sobic005G091300 Sobic009G003000 Sobic009G003000 Sobic004G238100--Sobic009G003000 Sobic004G238100--Sobic006G271500 Sobic008G119800 Sobic008G119800 Sobic004G238100--Sobic008G119800 Sobic009G246300 Sobic009G246300 Sobic004G238100--Sobic009G246300 Sobic006G259700 Sobic006G259700 Sobic004G238100--Sobic006G259700 Sobic004G113100 Sobic004G113100 Sobic004G238100--Sobic004G113100 Sobic009G176800 Sobic009G176800 Sobic004G238100--Sobic009G176800
Octagon: transcription factors


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