Gene annotation
Transcriptome id Sobic.004G279100.2,Sobic.004G279100.1
Synonym ATCPK5, Sb04g031570, CPK5
Functional annotation CAMK_CAMK_like.15 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
UniProt C5Y0V9
Pfam PF13499 PF07714
Panther DB PTHR24349 PTHR24349:SF83
NCBI CDD KOG0032; Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily
KEGG Orthology K13412; calcium-dependent protein kinase
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT2G17290 : Calcium-dependent protein kinase family protein
RAP-DB (Rice) LOC_Os02g46090.1 : CAMK_CAMK_like.15 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
MaizeGDB (Corn) Zm00025a016143 , Zm00025a043932 , Zm00025a032358 , Zm00025a024833 , Zm00025a047650 , Zm00025a014340 , Zm00025a032700 , Zm00025a056829 , Zm00025a056693 , Zm00025a010059
Brachypodium KQK12833 , KQK00812 , KQK20829 , KQK20828 , KQJ84217
Barley HORVU6Hr1G066470.9 , HORVU6Hr1G066470.8 , HORVU6Hr1G066470.5 , HORVU6Hr1G066470.4 , HORVU6Hr1G066470.7 , HORVU6Hr1G066470.6 , HORVU6Hr1G066470.1 , HORVU6Hr1G066470.3 , HORVU6Hr1G066470.2 , HORVU1Hr1G070840.3 , HORVU1Hr1G070840.4 , HORVU6Hr1G066470.11 , HORVU6Hr1G066470.10 , HORVU6Hr1G066470.13 , HORVU6Hr1G066470.12 , HORVU6Hr1G066470.14 , HORVU6Hr1G066470.17 , HORVU6Hr1G066470.16 , HORVU2Hr1G058530.4 , HORVU2Hr1G058530.1 , HORVU2Hr1G058530.3 , HORVU2Hr1G058530.2 , HORVU6Hr1G094990.7 , HORVU6Hr1G094990.6 , HORVU6Hr1G094990.5 , HORVU6Hr1G094990.4 , HORVU6Hr1G094990.3 , HORVU6Hr1G094990.2 , HORVU6Hr1G094990.1 , HORVU6Hr1G094990.8 , HORVU1Hr1G070840.1 , HORVU1Hr1G070840.2 , HORVU4Hr1G004540.9 , HORVU4Hr1G004540.8 , HORVU4Hr1G004540.3 , HORVU4Hr1G004540.1 , HORVU4Hr1G004540.19 , HORVU4Hr1G004540.18 , HORVU4Hr1G004540.13 , HORVU4Hr1G004540.10 , HORVU4Hr1G004540.17 , HORVU4Hr1G004540.16 , HORVU4Hr1G004540.15 , HORVU4Hr1G004540.14 , HORVU2Hr1G096270.8 , HORVU2Hr1G096270.1 , HORVU2Hr1G096270.2 , HORVU2Hr1G096270.3 , HORVU2Hr1G096270.4 , HORVU2Hr1G096270.5 , HORVU2Hr1G096270.6 , HORVU2Hr1G096270.7 , HORVU5Hr1G103830.4 , HORVU5Hr1G103830.5 , HORVU5Hr1G103830.6 , HORVU5Hr1G103830.7 , HORVU5Hr1G103830.1 , HORVU5Hr1G103830.2 , HORVU6Hr1G066470.15 , HORVU4Hr1G004540.20 , HORVU4Hr1G019530.8 , HORVU4Hr1G019530.4 , HORVU4Hr1G019530.6 , HORVU4Hr1G019530.7 , HORVU4Hr1G019530.1 , HORVU4Hr1G019530.2 , HORVU4Hr1G019530.3
Wheat TraesCS5B02G428700 , TraesCS1D02G290700 , TraesCS4A02G283400 , TraesCS2A02G407200 , TraesCS5B02G109300 , TraesCS1A02G292200 , TraesCS1A02G292200 , TraesCS4D02G027600 , TraesCS4D02G107200 , TraesCS5A02G426800 , TraesCS5A02G426800 , TraesCS1B02G301600 , TraesCS5D02G305200 , TraesCS5A02G298500 , TraesCS2B02G269200 , TraesCS2B02G269200 , TraesCS2B02G269200 , TraesCS2D02G456400 , TraesCS4B02G030100 , TraesCS6B02G467300 , TraesCS6D02G404800 , TraesCS4B02G030100 , TraesCS4B02G109800 , TraesCS5D02G124000 , TraesCS6B02G288600 , TraesCS5B02G297700 , TraesCS6A02G261200 , TraesCS4A02G206200 , TraesCS4A02G206200 , TraesCS2A02G456100 , TraesCS6D02G242000 , TraesCS6D02G242000 , TraesCS2B02G478100 , TraesCS6A02G421000 , TraesCS2D02G249900 , TraesCS2D02G249900 , TraesCS4B02G109800 , TraesCS2D02G404200 , TraesCS2B02G424900 , TraesCS2A02G248200 , TraesCS2A02G248200 , TraesCS2A02G248200
Populus -


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cDNA sequences
Sobic.004G279100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G113800 CGMC_GSK.1 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K03083: glycogen synthase kinase 3 beta
K00924: kinase
2 Sobic.006G156300 WD-40 repeat family protein, putative, expressed -
3 Sobic.002G134600 nucleic acid binding protein, putative, expressed -
4 Sobic.002G235300 expressed protein -
5 Sobic.010G009800 OsFBX182 - F-box domain containing protein, expressed -
6 Sobic.003G316700 katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed K18643: katanin p80 WD40 repeat-containing subunit B1
7 Sobic.007G165900 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed K05610: UCHL5, ubiquitin carboxyl-terminal hydrolase L5
8 Sobic.005G036800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@calmodulin-binding protein, putative, expressed -
9 Sobic.002G257200 uridine/cytidine kinase-like 1, putative, expressed K00876: udk, uridine kinase
10 Sobic.002G071000 - K11594: DDX3X, ATP-dependent RNA helicase DDX3X
11 Sobic.003G309200 expressed protein K12617: PATL1, DNA topoisomerase 2-associated protein PAT1
12 Sobic.003G233200 cinnamoyl-CoA reductase-related, putative, expressed -
13 Sobic.001G057700 heat stress transcription factor, putative, expressed K09419: heat shock transcription factor, other eukaryote
14 Sobic.005G155800 actin polymerization factor, putative, expressed K05754: actin related protein 2/3 complex, subunit 5
15 Sobic.009G066900 DnaK family protein, putative, expressed K09489: heat shock 70kDa protein 4
16 Sobic.002G036400 OsFBK18 - F-box domain and kelch repeat containing protein, expressed -
17 Sobic.009G180500 Myb-like DNA-binding domain containing protein, putative, expressed -
18 Sobic.003G339700 Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.12 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
19 Sobic.002G343300 zinc finger family protein, putative, expressed -
20 Sobic.002G420900 stress responsive protein, putative, expressed -


Gene co-expression network
sample Sobic004G279100 Sobic004G279100 Sobic003G113800 Sobic003G113800 Sobic004G279100--Sobic003G113800 Sobic006G156300 Sobic006G156300 Sobic004G279100--Sobic006G156300 Sobic002G134600 Sobic002G134600 Sobic004G279100--Sobic002G134600 Sobic002G235300 Sobic002G235300 Sobic004G279100--Sobic002G235300 Sobic010G009800 Sobic010G009800 Sobic004G279100--Sobic010G009800 Sobic003G316700 Sobic003G316700 Sobic004G279100--Sobic003G316700 Sobic007G165900 Sobic007G165900 Sobic004G279100--Sobic007G165900 Sobic005G036800 Sobic005G036800 Sobic004G279100--Sobic005G036800 Sobic002G257200 Sobic002G257200 Sobic004G279100--Sobic002G257200 Sobic006G280500 Sobic006G280500 Sobic003G113800--Sobic006G280500 Sobic003G293300 Sobic003G293300 Sobic003G113800--Sobic003G293300 Sobic003G113800--Sobic004G279100 Sobic001G234200 Sobic001G234200 Sobic003G113800--Sobic001G234200 Sobic002G071000 Sobic002G071000 Sobic003G113800--Sobic002G071000 Sobic006G049700 Sobic006G049700 Sobic003G113800--Sobic006G049700 Sobic003G113800--Sobic002G235300 Sobic001G459100 Sobic001G459100 Sobic003G113800--Sobic001G459100 Sobic002G083900 Sobic002G083900 Sobic003G113800--Sobic002G083900 Sobic006G112100 Sobic006G112100 Sobic006G156300--Sobic006G112100 Sobic003G259400 Sobic003G259400 Sobic006G156300--Sobic003G259400 Sobic001G119800 Sobic001G119800 Sobic006G156300--Sobic001G119800 Sobic001G422700 Sobic001G422700 Sobic006G156300--Sobic001G422700 Sobic007G112000 Sobic007G112000 Sobic006G156300--Sobic007G112000 Sobic006G156300--Sobic004G279100 Sobic003G340900 Sobic003G340900 Sobic006G156300--Sobic003G340900 Sobic002G427300 Sobic002G427300 Sobic006G156300--Sobic002G427300 Sobic003G275000 Sobic003G275000 Sobic006G156300--Sobic003G275000 Sobic003G309200 Sobic003G309200 Sobic002G134600--Sobic003G309200 Sobic007G006900 Sobic007G006900 Sobic002G134600--Sobic007G006900 Sobic001G226700 Sobic001G226700 Sobic002G134600--Sobic001G226700 Sobic001G425800 Sobic001G425800 Sobic002G134600--Sobic001G425800 Sobic002G294800 Sobic002G294800 Sobic002G134600--Sobic002G294800 Sobic001G362200 Sobic001G362200 Sobic002G134600--Sobic001G362200 Sobic009G219000 Sobic009G219000 Sobic002G134600--Sobic009G219000 Sobic001G122832 Sobic001G122832 Sobic002G134600--Sobic001G122832 Sobic010G076300 Sobic010G076300 Sobic002G134600--Sobic010G076300 Sobic002G235300--Sobic003G113800 Sobic002G235300--Sobic002G083900 Sobic002G235300--Sobic003G259400 Sobic002G235300--Sobic001G422700 Sobic002G235300--Sobic002G071000 Sobic006G010000 Sobic006G010000 Sobic002G235300--Sobic006G010000 Sobic002G235300--Sobic004G279100 Sobic004G287900 Sobic004G287900 Sobic002G235300--Sobic004G287900 Sobic001G069600 Sobic001G069600 Sobic002G235300--Sobic001G069600 Sobic010G009800--Sobic007G165900 Sobic003G379200 Sobic003G379200 Sobic010G009800--Sobic003G379200 Sobic003G104000 Sobic003G104000 Sobic010G009800--Sobic003G104000 Sobic006G261400 Sobic006G261400 Sobic010G009800--Sobic006G261400 Sobic001G395100 Sobic001G395100 Sobic010G009800--Sobic001G395100 Sobic002G052700 Sobic002G052700 Sobic010G009800--Sobic002G052700 Sobic001G515000 Sobic001G515000 Sobic010G009800--Sobic001G515000 Sobic001G096000 Sobic001G096000 Sobic010G009800--Sobic001G096000 Sobic008G124900 Sobic008G124900 Sobic010G009800--Sobic008G124900 Sobic001G386300 Sobic001G386300 Sobic003G316700--Sobic001G386300 Sobic003G316700--Sobic001G425800 Sobic001G031100 Sobic001G031100 Sobic003G316700--Sobic001G031100 Sobic002G358400 Sobic002G358400 Sobic003G316700--Sobic002G358400 Sobic001G332500 Sobic001G332500 Sobic003G316700--Sobic001G332500 Sobic003G316700--Sobic002G257200 Sobic004G146800 Sobic004G146800 Sobic003G316700--Sobic004G146800 Sobic004G203400 Sobic004G203400 Sobic003G316700--Sobic004G203400 Sobic009G200800 Sobic009G200800 Sobic003G316700--Sobic009G200800 Sobic004G257100 Sobic004G257100 Sobic007G165900--Sobic004G257100 Sobic007G165900--Sobic006G261400 Sobic008G046500 Sobic008G046500 Sobic007G165900--Sobic008G046500 Sobic004G131800 Sobic004G131800 Sobic007G165900--Sobic004G131800 Sobic006G127600 Sobic006G127600 Sobic007G165900--Sobic006G127600 Sobic001G361300 Sobic001G361300 Sobic007G165900--Sobic001G361300 Sobic007G165900--Sobic001G226700 Sobic001G251100 Sobic001G251100 Sobic007G165900--Sobic001G251100 Sobic007G165900--Sobic010G009800 Sobic003G048500 Sobic003G048500 Sobic005G036800--Sobic003G048500 Sobic009G229200 Sobic009G229200 Sobic005G036800--Sobic009G229200 Sobic003G421201 Sobic003G421201 Sobic005G036800--Sobic003G421201 Sobic005G036800--Sobic004G279100 Sobic005G036800--Sobic003G316700 Sobic001G076400 Sobic001G076400 Sobic005G036800--Sobic001G076400 Sobic001G391600 Sobic001G391600 Sobic005G036800--Sobic001G391600 Sobic009G195900 Sobic009G195900 Sobic005G036800--Sobic009G195900 Sobic005G036800--Sobic003G113800 Sobic002G257200--Sobic001G425800 Sobic005G158300 Sobic005G158300 Sobic002G257200--Sobic005G158300 Sobic004G226600 Sobic004G226600 Sobic002G257200--Sobic004G226600 Sobic002G257200--Sobic003G316700 Sobic002G257200--Sobic010G009800 Sobic004G316700 Sobic004G316700 Sobic002G257200--Sobic004G316700 Sobic004G325600 Sobic004G325600 Sobic002G257200--Sobic004G325600 Sobic004G286500 Sobic004G286500 Sobic002G257200--Sobic004G286500 Sobic003G273500 Sobic003G273500 Sobic002G257200--Sobic003G273500
Octagon: transcription factors


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