Gene annotation
Transcriptome id Sobic.002G036400.3
Synonym Sb02g003160
Functional annotation OsFBK18 - F-box domain and kelch repeat containing protein, expressed
UniProt C5X9L1
Pfam PF01344 PF00646
Panther DB PTHR24411:SF27 PTHR24411
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G30090 : Galactose oxidase/kelch repeat superfamily protein
RAP-DB (Rice) LOC_Os07g05880.2 : OsFBK18 - F-box domain and kelch repeat containing protein, expressed
MaizeGDB (Corn) Zm00025a045039
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.002G036400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G343300 zinc finger family protein, putative, expressed -
2 Sobic.003G339700 Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.12 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
3 Sobic.003G373600 -(PubMedID : 26976818)@serine hydroxymethyltransferase, mitochondrial precursor, putative, expressed K00600: glyA, glycine hydroxymethyltransferase
4 Sobic.006G269700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.003G350800 SLT1 protein, putative, expressed -
6 Sobic.009G135900 cysteine proteinase inhibitor precursor protein, putative, expressed -
7 Sobic.004G279100 CAMK_CAMK_like.15 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
8 Sobic.010G251300 OsSBeL1 - Putative Serine Beta-Lactamase homologue, expressed K08869: ADCK, aarF domain-containing kinase
9 Sobic.002G020400 PDV2, putative, expressed -
10 Sobic.009G200800 protein kinase domain containing protein, expressed -
11 Sobic.001G126100 OsFBO16 - F-box and other domain containing protein, expressed -
12 Sobic.002G290400 Protein kinase superfamily protein(PubMedID : 26465154)@serine/threonine-protein kinase SRPK1, putative, expressed -
13 Sobic.009G180500 Myb-like DNA-binding domain containing protein, putative, expressed -
14 Sobic.005G026100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydroxymethylglutaryl-CoA lyase, putative, expressed K01640: E4.1.3.4, HMGCL, hydroxymethylglutaryl-CoA lyase
15 Sobic.004G269800 Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed K05928: tocopherol O-methyltransferase
16 Sobic.002G408300 OsFBT11 - F-box and tubby domain containing protein, expressed -
17 Sobic.001G122832 - K13414: mitogen-activated protein kinase kinase kinase 1
18 Sobic.003G221900 helix-loop-helix DNA-binding domain containing protein, expressed -
19 Sobic.003G184800 sodium/calcium exchanger protein, putative, expressed K07300: chaA, Ca2+:H+ antiporter
20 Sobic.001G333600 membrane-anchored ubiquitin-fold protein, putative, expressed -


Gene co-expression network
sample Sobic002G036400 Sobic002G036400 Sobic002G343300 Sobic002G343300 Sobic002G036400--Sobic002G343300 Sobic003G339700 Sobic003G339700 Sobic002G036400--Sobic003G339700 Sobic003G373600 Sobic003G373600 Sobic002G036400--Sobic003G373600 Sobic006G269700 Sobic006G269700 Sobic002G036400--Sobic006G269700 Sobic003G350800 Sobic003G350800 Sobic002G036400--Sobic003G350800 Sobic009G135900 Sobic009G135900 Sobic002G036400--Sobic009G135900 Sobic004G279100 Sobic004G279100 Sobic002G036400--Sobic004G279100 Sobic010G251300 Sobic010G251300 Sobic002G036400--Sobic010G251300 Sobic002G020400 Sobic002G020400 Sobic002G036400--Sobic002G020400 Sobic004G255700 Sobic004G255700 Sobic002G343300--Sobic004G255700 Sobic008G047400 Sobic008G047400 Sobic002G343300--Sobic008G047400 Sobic006G033200 Sobic006G033200 Sobic002G343300--Sobic006G033200 Sobic004G059900 Sobic004G059900 Sobic002G343300--Sobic004G059900 Sobic009G066900 Sobic009G066900 Sobic002G343300--Sobic009G066900 Sobic002G134600 Sobic002G134600 Sobic002G343300--Sobic002G134600 Sobic008G124900 Sobic008G124900 Sobic002G343300--Sobic008G124900 Sobic009G219900 Sobic009G219900 Sobic002G343300--Sobic009G219900 Sobic001G541100 Sobic001G541100 Sobic002G343300--Sobic001G541100 Sobic002G417300 Sobic002G417300 Sobic003G339700--Sobic002G417300 Sobic003G381700 Sobic003G381700 Sobic003G339700--Sobic003G381700 Sobic008G187100 Sobic008G187100 Sobic003G339700--Sobic008G187100 Sobic007G146400 Sobic007G146400 Sobic003G339700--Sobic007G146400 Sobic001G160800 Sobic001G160800 Sobic003G339700--Sobic001G160800 Sobic003G334000 Sobic003G334000 Sobic003G339700--Sobic003G334000 Sobic001G057700 Sobic001G057700 Sobic003G339700--Sobic001G057700 Sobic009G069300 Sobic009G069300 Sobic003G339700--Sobic009G069300 Sobic006G066800 Sobic006G066800 Sobic003G339700--Sobic006G066800 Sobic003G157900 Sobic003G157900 Sobic003G373600--Sobic003G157900 Sobic005G062700 Sobic005G062700 Sobic003G373600--Sobic005G062700 Sobic003G425300 Sobic003G425300 Sobic003G373600--Sobic003G425300 Sobic003G373600--Sobic003G381700 Sobic005G172400 Sobic005G172400 Sobic003G373600--Sobic005G172400 Sobic001G276300 Sobic001G276300 Sobic003G373600--Sobic001G276300 Sobic007G079400 Sobic007G079400 Sobic003G373600--Sobic007G079400 Sobic008G077500 Sobic008G077500 Sobic003G373600--Sobic008G077500 Sobic003G373600--Sobic008G187100 Sobic003G040200 Sobic003G040200 Sobic006G269700--Sobic003G040200 Sobic003G071000 Sobic003G071000 Sobic006G269700--Sobic003G071000 Sobic006G269700--Sobic002G036400 Sobic003G416400 Sobic003G416400 Sobic006G269700--Sobic003G416400 Sobic003G333900 Sobic003G333900 Sobic006G269700--Sobic003G333900 Sobic006G269700--Sobic002G343300 Sobic008G110300 Sobic008G110300 Sobic006G269700--Sobic008G110300 Sobic009G258100 Sobic009G258100 Sobic006G269700--Sobic009G258100 Sobic001G311100 Sobic001G311100 Sobic006G269700--Sobic001G311100 Sobic009G246300 Sobic009G246300 Sobic003G350800--Sobic009G246300 Sobic001G333600 Sobic001G333600 Sobic003G350800--Sobic001G333600 Sobic003G350800--Sobic010G251300 Sobic003G043300 Sobic003G043300 Sobic003G350800--Sobic003G043300 Sobic002G358800 Sobic002G358800 Sobic003G350800--Sobic002G358800 Sobic001G221800 Sobic001G221800 Sobic003G350800--Sobic001G221800 Sobic002G290400 Sobic002G290400 Sobic003G350800--Sobic002G290400 Sobic010G230500 Sobic010G230500 Sobic003G350800--Sobic010G230500 Sobic003G350800--Sobic008G077500 Sobic004G058200 Sobic004G058200 Sobic009G135900--Sobic004G058200 Sobic009G135900--Sobic004G255700 Sobic005G033200 Sobic005G033200 Sobic009G135900--Sobic005G033200 Sobic009G135900--Sobic003G350800 Sobic009G217900 Sobic009G217900 Sobic009G135900--Sobic009G217900 Sobic009G135900--Sobic009G219900 Sobic004G247000 Sobic004G247000 Sobic009G135900--Sobic004G247000 Sobic003G369500 Sobic003G369500 Sobic009G135900--Sobic003G369500 Sobic001G328200 Sobic001G328200 Sobic009G135900--Sobic001G328200 Sobic003G113800 Sobic003G113800 Sobic004G279100--Sobic003G113800 Sobic006G156300 Sobic006G156300 Sobic004G279100--Sobic006G156300 Sobic004G279100--Sobic002G134600 Sobic002G235300 Sobic002G235300 Sobic004G279100--Sobic002G235300 Sobic010G009800 Sobic010G009800 Sobic004G279100--Sobic010G009800 Sobic003G316700 Sobic003G316700 Sobic004G279100--Sobic003G316700 Sobic007G165900 Sobic007G165900 Sobic004G279100--Sobic007G165900 Sobic005G036800 Sobic005G036800 Sobic004G279100--Sobic005G036800 Sobic002G257200 Sobic002G257200 Sobic004G279100--Sobic002G257200 Sobic010G251300--Sobic002G290400 Sobic009G200800 Sobic009G200800 Sobic010G251300--Sobic009G200800 Sobic010G251300--Sobic003G043300 Sobic001G064200 Sobic001G064200 Sobic010G251300--Sobic001G064200 Sobic002G383600 Sobic002G383600 Sobic010G251300--Sobic002G383600 Sobic010G251300--Sobic003G350800 Sobic010G251300--Sobic007G146400 Sobic010G251300--Sobic001G333600 Sobic010G251300--Sobic001G057700 Sobic004G178100 Sobic004G178100 Sobic002G020400--Sobic004G178100 Sobic001G043800 Sobic001G043800 Sobic002G020400--Sobic001G043800 Sobic002G000600 Sobic002G000600 Sobic002G020400--Sobic002G000600 Sobic003G141100 Sobic003G141100 Sobic002G020400--Sobic003G141100 Sobic007G023200 Sobic007G023200 Sobic002G020400--Sobic007G023200 Sobic003G439100 Sobic003G439100 Sobic002G020400--Sobic003G439100 Sobic002G239300 Sobic002G239300 Sobic002G020400--Sobic002G239300 Sobic002G301000 Sobic002G301000 Sobic002G020400--Sobic002G301000 Sobic003G398700 Sobic003G398700 Sobic002G020400--Sobic003G398700
Octagon: transcription factors


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