Gene annotation
Transcriptome id Sobic.003G184800.2
Synonym CAX1-LIKE, ATHCX1, ATCAX3, Sb03g024820, CAX3
Functional annotation sodium/calcium exchanger protein, putative, expressed
UniProt A0A1W0VY02
Pfam PF01699
Panther DB PTHR31503 PTHR31503:SF1
NCBI CDD -
KEGG Orthology K07300; chaA, Ca2+:H+ antiporter
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT2G38170 : cation exchanger 1
RAP-DB (Rice) LOC_Os01g37690.1 : sodium/calcium exchanger protein, putative, expressed
MaizeGDB (Corn) Zm00025a028809
Brachypodium KQK08307
Barley HORVU3Hr1G049060.16 , HORVU3Hr1G049060.14 , HORVU3Hr1G049060.15 , HORVU3Hr1G049060.12 , HORVU3Hr1G049060.13 , HORVU3Hr1G049060.10 , HORVU3Hr1G049060.11 , HORVU3Hr1G049060.4 , HORVU3Hr1G049060.5 , HORVU3Hr1G049060.6 , HORVU3Hr1G049060.7 , HORVU3Hr1G049060.1 , HORVU3Hr1G049060.2 , HORVU3Hr1G049060.3 , HORVU3Hr1G049060.8 , HORVU3Hr1G049060.9
Wheat TraesCS3D02G206400 , TraesCS3D02G206400 , TraesCS3A02G202800 , TraesCS2B02G465600 , TraesCS2B02G465600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G134600 nucleic acid binding protein, putative, expressed -
2 Sobic.001G122832 - K13414: mitogen-activated protein kinase kinase kinase 1
3 Sobic.003G309200 expressed protein K12617: PATL1, DNA topoisomerase 2-associated protein PAT1
4 Sobic.010G149200 CAAX amino terminal protease family protein, putative, expressed K07052: uncharacterized protein
5 Sobic.001G126100 OsFBO16 - F-box and other domain containing protein, expressed -
6 Sobic.010G223700 MYB transcription factor, putative, expressed -
7 Sobic.010G076300 - -
8 Sobic.001G298600 ribosomal L18p/L5e family protein, expressed -
9 Sobic.004G233000 - -
10 Sobic.010G025300 expressed protein -
11 Sobic.007G006900 shwachman-Bodian-Diamond syndrome protein, putative, expressed K14574: SDO1, ribosome maturation protein SDO1
12 Sobic.001G262700 hhH-GPD superfamily base excision DNA repair protein, putative, expressed -
13 Sobic.005G026100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydroxymethylglutaryl-CoA lyase, putative, expressed K01640: E4.1.3.4, HMGCL, hydroxymethylglutaryl-CoA lyase
14 Sobic.001G425800 src homology-3 domain protein 3, putative, expressed -
15 Sobic.004G246900 ankyrin repeat-containing protein, putative, expressed -
16 Sobic.007G019800 expressed protein -
17 Sobic.009G233300 60S ribosomal protein L18a-1, putative, expressed -
18 Sobic.006G102500 transporter family protein, putative, expressed -
19 Sobic.006G145200 expressed protein -
20 Sobic.003G035100 no apical meristem protein, putative, expressed -


Gene co-expression network
sample Sobic003G184800 Sobic003G184800 Sobic002G134600 Sobic002G134600 Sobic003G184800--Sobic002G134600 Sobic001G122832 Sobic001G122832 Sobic003G184800--Sobic001G122832 Sobic003G309200 Sobic003G309200 Sobic003G184800--Sobic003G309200 Sobic010G149200 Sobic010G149200 Sobic003G184800--Sobic010G149200 Sobic001G126100 Sobic001G126100 Sobic003G184800--Sobic001G126100 Sobic010G223700 Sobic010G223700 Sobic003G184800--Sobic010G223700 Sobic010G076300 Sobic010G076300 Sobic003G184800--Sobic010G076300 Sobic001G298600 Sobic001G298600 Sobic003G184800--Sobic001G298600 Sobic004G233000 Sobic004G233000 Sobic003G184800--Sobic004G233000 Sobic002G134600--Sobic003G309200 Sobic007G006900 Sobic007G006900 Sobic002G134600--Sobic007G006900 Sobic001G226700 Sobic001G226700 Sobic002G134600--Sobic001G226700 Sobic001G425800 Sobic001G425800 Sobic002G134600--Sobic001G425800 Sobic002G294800 Sobic002G294800 Sobic002G134600--Sobic002G294800 Sobic001G362200 Sobic001G362200 Sobic002G134600--Sobic001G362200 Sobic009G219000 Sobic009G219000 Sobic002G134600--Sobic009G219000 Sobic002G134600--Sobic001G122832 Sobic002G134600--Sobic010G076300 Sobic003G221900 Sobic003G221900 Sobic001G122832--Sobic003G221900 Sobic001G332500 Sobic001G332500 Sobic001G122832--Sobic001G332500 Sobic005G027400 Sobic005G027400 Sobic001G122832--Sobic005G027400 Sobic003G029700 Sobic003G029700 Sobic001G122832--Sobic003G029700 Sobic003G411900 Sobic003G411900 Sobic001G122832--Sobic003G411900 Sobic003G316500 Sobic003G316500 Sobic001G122832--Sobic003G316500 Sobic001G122832--Sobic010G223700 Sobic001G122832--Sobic002G294800 Sobic002G211800 Sobic002G211800 Sobic001G122832--Sobic002G211800 Sobic003G309200--Sobic010G223700 Sobic003G309200--Sobic002G134600 Sobic001G262700 Sobic001G262700 Sobic003G309200--Sobic001G262700 Sobic008G124900 Sobic008G124900 Sobic003G309200--Sobic008G124900 Sobic003G309200--Sobic003G221900 Sobic006G033200 Sobic006G033200 Sobic003G309200--Sobic006G033200 Sobic002G383600 Sobic002G383600 Sobic003G309200--Sobic002G383600 Sobic010G130000 Sobic010G130000 Sobic003G309200--Sobic010G130000 Sobic001G389100 Sobic001G389100 Sobic003G309200--Sobic001G389100 Sobic006G145200 Sobic006G145200 Sobic010G149200--Sobic006G145200 Sobic010G243900 Sobic010G243900 Sobic010G149200--Sobic010G243900 Sobic010G021500 Sobic010G021500 Sobic010G149200--Sobic010G021500 Sobic010G149200--Sobic001G126100 Sobic004G164400 Sobic004G164400 Sobic010G149200--Sobic004G164400 Sobic003G340600 Sobic003G340600 Sobic010G149200--Sobic003G340600 Sobic004G042200 Sobic004G042200 Sobic010G149200--Sobic004G042200 Sobic010G143800 Sobic010G143800 Sobic010G149200--Sobic010G143800 Sobic010G149200--Sobic003G221900 Sobic001G126100--Sobic010G149200 Sobic001G126100--Sobic004G164400 Sobic001G126100--Sobic003G221900 Sobic002G104100 Sobic002G104100 Sobic001G126100--Sobic002G104100 Sobic001G169900 Sobic001G169900 Sobic001G126100--Sobic001G169900 Sobic001G297500 Sobic001G297500 Sobic001G126100--Sobic001G297500 Sobic001G126100--Sobic010G243900 Sobic001G126100--Sobic004G042200 Sobic006G105400 Sobic006G105400 Sobic001G126100--Sobic006G105400 Sobic010G223700--Sobic003G309200 Sobic010G223700--Sobic003G221900 Sobic010G223700--Sobic001G122832 Sobic010G025300 Sobic010G025300 Sobic010G223700--Sobic010G025300 Sobic010G223700--Sobic001G425800 Sobic010G223700--Sobic001G389100 Sobic004G117900 Sobic004G117900 Sobic010G223700--Sobic004G117900 Sobic010G223700--Sobic003G411900 Sobic003G131400 Sobic003G131400 Sobic010G223700--Sobic003G131400 Sobic001G191600 Sobic001G191600 Sobic010G076300--Sobic001G191600 Sobic010G076300--Sobic002G134600 Sobic010G076300--Sobic010G223700 Sobic010G076300--Sobic001G226700 Sobic003G109700 Sobic003G109700 Sobic010G076300--Sobic003G109700 Sobic009G103600 Sobic009G103600 Sobic010G076300--Sobic009G103600 Sobic001G222250 Sobic001G222250 Sobic010G076300--Sobic001G222250 Sobic010G076300--Sobic001G298600 Sobic010G076300--Sobic002G294800 Sobic007G132400 Sobic007G132400 Sobic001G298600--Sobic007G132400 Sobic006G228500 Sobic006G228500 Sobic001G298600--Sobic006G228500 Sobic004G121100 Sobic004G121100 Sobic001G298600--Sobic004G121100 Sobic001G107500 Sobic001G107500 Sobic001G298600--Sobic001G107500 Sobic002G310200 Sobic002G310200 Sobic001G298600--Sobic002G310200 Sobic006G273200 Sobic006G273200 Sobic001G298600--Sobic006G273200 Sobic009G215800 Sobic009G215800 Sobic001G298600--Sobic009G215800 Sobic003G176600 Sobic003G176600 Sobic001G298600--Sobic003G176600 Sobic001G281600 Sobic001G281600 Sobic001G298600--Sobic001G281600 Sobic004G233000--Sobic001G298600 Sobic009G232700 Sobic009G232700 Sobic004G233000--Sobic009G232700 Sobic008G165700 Sobic008G165700 Sobic004G233000--Sobic008G165700 Sobic002G187801 Sobic002G187801 Sobic004G233000--Sobic002G187801 Sobic006G038400 Sobic006G038400 Sobic004G233000--Sobic006G038400 Sobic008G189400 Sobic008G189400 Sobic004G233000--Sobic008G189400 Sobic001G429300 Sobic001G429300 Sobic004G233000--Sobic001G429300 Sobic010G280100 Sobic010G280100 Sobic004G233000--Sobic010G280100 Sobic009G233300 Sobic009G233300 Sobic004G233000--Sobic009G233300
Octagon: transcription factors


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