Gene annotation
Transcriptome id Sobic.010G223700.1,Sobic.010G223700.3,Sobic.010G223700.2
Synonym
Functional annotation MYB transcription factor, putative, expressed
UniProt A0A194YLW4 , A0A194YKS1 , A0A194YKS5
Pfam PF00249
Panther DB PTHR12802 PTHR12802:SF56
NCBI CDD KOG0724; Zuotin and related molecular chaperones (DnaJ superfamily), contains DNA-binding domains
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G52660 : Homeodomain-like superfamily protein
RAP-DB (Rice) LOC_Os06g45840.2 : MYB transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a014301 , Zm00025a041950 , Zm00025a032319 , Zm00025a042744 , Zm00025a051773
Brachypodium KQK00786 , KQK00783 , KQK00780 , KQK00781 , KQK00785 , KQK17070 , PNT75422 , KQK00779 , KQK00784 , KQK00782
Barley HORVU7Hr1G001830.7 , HORVU7Hr1G001830.6 , HORVU7Hr1G001830.5 , HORVU7Hr1G001830.4 , HORVU7Hr1G001830.3 , HORVU7Hr1G001830.2 , HORVU7Hr1G001830.8 , HORVU7Hr1G001830.12 , HORVU7Hr1G001830.11 , HORVU7Hr1G001830.10
Wheat TraesCS7D02G014900 , TraesCS7D02G014900 , TraesCS7A02G017600 , TraesCS4A02G474100 , TraesCS4A02G474100 , TraesCS4A02G474100
Populus -


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cDNA sequences
Sobic.010G223700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G309200 expressed protein K12617: PATL1, DNA topoisomerase 2-associated protein PAT1
2 Sobic.003G221900 helix-loop-helix DNA-binding domain containing protein, expressed -
3 Sobic.001G122832 - K13414: mitogen-activated protein kinase kinase kinase 1
4 Sobic.010G025300 expressed protein -
5 Sobic.001G425800 src homology-3 domain protein 3, putative, expressed -
6 Sobic.001G389100 DUF630/DUF632 domains containing protein, putative, expressed -
7 Sobic.004G117900 expressed protein -
8 Sobic.003G411900 auxin response factor 2(PubMedID : 26465154)@auxin response factor 2(PubMedID : 26465154)@"domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@"OsARF4(Ortholog in rice:Hu et al., 2018)"(PubMedID : 31659874)@Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@auxin response factor, putative, expressed -
9 Sobic.003G131400 heat shock protein DnaJ, putative, expressed -
10 Sobic.006G105400 expressed protein -
11 Sobic.002G134600 nucleic acid binding protein, putative, expressed -
12 Sobic.001G332500 WRKY81, expressed -
13 Sobic.003G029700 CK1_CaseinKinase_1a.5 - CK1 includes the casein kinase 1 kinases, expressed -
14 Sobic.010G076300 - -
15 Sobic.003G248200 NLI interacting factor-like phosphatase, putative, expressed -
16 Sobic.005G104400 - -
17 Sobic.007G132400 RNA recognition motif containing protein, putative, expressed K12881: THOC4, THO complex subunit 4
18 Sobic.008G124900 heat shock protein DnaJ, putative, expressed -
19 Sobic.001G226700 WD repeat-containing protein, putative, expressed -
20 Sobic.010G167900 expressed protein K14376: poly(A) polymerase


Gene co-expression network
sample Sobic010G223700 Sobic010G223700 Sobic003G309200 Sobic003G309200 Sobic010G223700--Sobic003G309200 Sobic003G221900 Sobic003G221900 Sobic010G223700--Sobic003G221900 Sobic001G122832 Sobic001G122832 Sobic010G223700--Sobic001G122832 Sobic010G025300 Sobic010G025300 Sobic010G223700--Sobic010G025300 Sobic001G425800 Sobic001G425800 Sobic010G223700--Sobic001G425800 Sobic001G389100 Sobic001G389100 Sobic010G223700--Sobic001G389100 Sobic004G117900 Sobic004G117900 Sobic010G223700--Sobic004G117900 Sobic003G411900 Sobic003G411900 Sobic010G223700--Sobic003G411900 Sobic003G131400 Sobic003G131400 Sobic010G223700--Sobic003G131400 Sobic003G309200--Sobic010G223700 Sobic002G134600 Sobic002G134600 Sobic003G309200--Sobic002G134600 Sobic001G262700 Sobic001G262700 Sobic003G309200--Sobic001G262700 Sobic008G124900 Sobic008G124900 Sobic003G309200--Sobic008G124900 Sobic003G309200--Sobic003G221900 Sobic006G033200 Sobic006G033200 Sobic003G309200--Sobic006G033200 Sobic002G383600 Sobic002G383600 Sobic003G309200--Sobic002G383600 Sobic010G130000 Sobic010G130000 Sobic003G309200--Sobic010G130000 Sobic003G309200--Sobic001G389100 Sobic003G221900--Sobic001G122832 Sobic003G316500 Sobic003G316500 Sobic003G221900--Sobic003G316500 Sobic003G340600 Sobic003G340600 Sobic003G221900--Sobic003G340600 Sobic003G221900--Sobic001G389100 Sobic010G021500 Sobic010G021500 Sobic003G221900--Sobic010G021500 Sobic006G133900 Sobic006G133900 Sobic003G221900--Sobic006G133900 Sobic010G147100 Sobic010G147100 Sobic003G221900--Sobic010G147100 Sobic001G332500 Sobic001G332500 Sobic003G221900--Sobic001G332500 Sobic003G029700 Sobic003G029700 Sobic003G221900--Sobic003G029700 Sobic001G122832--Sobic003G221900 Sobic001G122832--Sobic001G332500 Sobic005G027400 Sobic005G027400 Sobic001G122832--Sobic005G027400 Sobic001G122832--Sobic003G029700 Sobic001G122832--Sobic003G411900 Sobic001G122832--Sobic003G316500 Sobic001G122832--Sobic010G223700 Sobic002G294800 Sobic002G294800 Sobic001G122832--Sobic002G294800 Sobic002G211800 Sobic002G211800 Sobic001G122832--Sobic002G211800 Sobic008G067600 Sobic008G067600 Sobic010G025300--Sobic008G067600 Sobic010G025300--Sobic010G223700 Sobic001G315100 Sobic001G315100 Sobic010G025300--Sobic001G315100 Sobic009G056800 Sobic009G056800 Sobic010G025300--Sobic009G056800 Sobic003G012500 Sobic003G012500 Sobic010G025300--Sobic003G012500 Sobic007G118600 Sobic007G118600 Sobic010G025300--Sobic007G118600 Sobic007G132400 Sobic007G132400 Sobic010G025300--Sobic007G132400 Sobic001G512700 Sobic001G512700 Sobic010G025300--Sobic001G512700 Sobic010G025300--Sobic004G117900 Sobic001G425800--Sobic002G134600 Sobic001G425800--Sobic010G223700 Sobic007G006900 Sobic007G006900 Sobic001G425800--Sobic007G006900 Sobic008G046500 Sobic008G046500 Sobic001G425800--Sobic008G046500 Sobic010G249100 Sobic010G249100 Sobic001G425800--Sobic010G249100 Sobic001G226700 Sobic001G226700 Sobic001G425800--Sobic001G226700 Sobic002G257200 Sobic002G257200 Sobic001G425800--Sobic002G257200 Sobic004G146800 Sobic004G146800 Sobic001G425800--Sobic004G146800 Sobic001G425800--Sobic008G124900 Sobic001G451400 Sobic001G451400 Sobic001G389100--Sobic001G451400 Sobic001G389100--Sobic003G316500 Sobic009G165700 Sobic009G165700 Sobic001G389100--Sobic009G165700 Sobic001G534700 Sobic001G534700 Sobic001G389100--Sobic001G534700 Sobic010G206900 Sobic010G206900 Sobic001G389100--Sobic010G206900 Sobic010G247800 Sobic010G247800 Sobic001G389100--Sobic010G247800 Sobic009G053900 Sobic009G053900 Sobic001G389100--Sobic009G053900 Sobic001G365900 Sobic001G365900 Sobic001G389100--Sobic001G365900 Sobic002G252800 Sobic002G252800 Sobic001G389100--Sobic002G252800 Sobic003G248200 Sobic003G248200 Sobic004G117900--Sobic003G248200 Sobic002G350300 Sobic002G350300 Sobic004G117900--Sobic002G350300 Sobic004G117900--Sobic003G131400 Sobic007G019800 Sobic007G019800 Sobic004G117900--Sobic007G019800 Sobic002G262600 Sobic002G262600 Sobic004G117900--Sobic002G262600 Sobic004G117900--Sobic001G512700 Sobic002G297200 Sobic002G297200 Sobic004G117900--Sobic002G297200 Sobic010G240900 Sobic010G240900 Sobic004G117900--Sobic010G240900 Sobic004G117900--Sobic010G223700 Sobic003G411900--Sobic001G365900 Sobic003G411900--Sobic003G029700 Sobic007G207000 Sobic007G207000 Sobic003G411900--Sobic007G207000 Sobic003G411900--Sobic001G122832 Sobic001G125200 Sobic001G125200 Sobic003G411900--Sobic001G125200 Sobic001G205200 Sobic001G205200 Sobic003G411900--Sobic001G205200 Sobic009G026500 Sobic009G026500 Sobic003G411900--Sobic009G026500 Sobic003G372500 Sobic003G372500 Sobic003G411900--Sobic003G372500 Sobic001G191600 Sobic001G191600 Sobic003G411900--Sobic001G191600 Sobic003G131400--Sobic004G117900 Sobic003G131400--Sobic010G223700 Sobic001G031600 Sobic001G031600 Sobic003G131400--Sobic001G031600 Sobic001G105500 Sobic001G105500 Sobic003G131400--Sobic001G105500 Sobic003G131400--Sobic003G309200 Sobic003G131400--Sobic010G240900 Sobic003G131400--Sobic007G019800 Sobic003G131400--Sobic010G025300 Sobic001G126100 Sobic001G126100 Sobic003G131400--Sobic001G126100
Octagon: transcription factors


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