Gene annotation
Transcriptome id Sobic.005G104400.1
Synonym
Functional annotation -
UniProt A0A1B6PRG1
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.005G104400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G262700 hhH-GPD superfamily base excision DNA repair protein, putative, expressed -
2 Sobic.010G025300 expressed protein -
3 Sobic.010G223700 MYB transcription factor, putative, expressed -
4 Sobic.002G400200 CS domain containing protein, putative, expressed -
5 Sobic.010G089100 nucleolar GTP-binding protein 1, putative, expressed -
6 Sobic.009G167600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
7 Sobic.004G091100 nuclear protein ZAP-related, putative, expressed K17602: YLP motif-containing protein 1
8 Sobic.007G020600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@MATE efflux protein, putative, expressed -
9 Sobic.002G427050 - -
10 Sobic.004G306500 OsMADS22 - MADS-box family gene with MIKCc type-box, expressed -
11 Sobic.003G139900 "Highest expression level in embryo, up-regulation in roots in response to exogenous ABA and PEG"(PubMedID : 27501690)@OsSPL1 - SBP-box gene family member, expressed -
12 Sobic.002G130800 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
13 Sobic.003G372500 DUF803 domain containing, putative, expressed -
14 Sobic.003G309200 expressed protein K12617: PATL1, DNA topoisomerase 2-associated protein PAT1
15 Sobic.005G061601 - -
16 Sobic.007G158300 phosphoglycerate mutase, putative, expressed K15634: 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
17 Sobic.001G358000 Putative splicing factor(PubMedID : 24356560)@RNA recognition motif containing protein, putative, expressed K12900: FUS-interacting serine-arginine-rich protein 1
18 Sobic.003G029700 CK1_CaseinKinase_1a.5 - CK1 includes the casein kinase 1 kinases, expressed -
19 Sobic.008G122600 - -
20 Sobic.001G122832 - K13414: mitogen-activated protein kinase kinase kinase 1


Gene co-expression network
sample Sobic005G104400 Sobic005G104400 Sobic001G262700 Sobic001G262700 Sobic005G104400--Sobic001G262700 Sobic010G025300 Sobic010G025300 Sobic005G104400--Sobic010G025300 Sobic010G223700 Sobic010G223700 Sobic005G104400--Sobic010G223700 Sobic002G400200 Sobic002G400200 Sobic005G104400--Sobic002G400200 Sobic010G089100 Sobic010G089100 Sobic005G104400--Sobic010G089100 Sobic009G167600 Sobic009G167600 Sobic005G104400--Sobic009G167600 Sobic004G091100 Sobic004G091100 Sobic005G104400--Sobic004G091100 Sobic007G020600 Sobic007G020600 Sobic005G104400--Sobic007G020600 Sobic002G427050 Sobic002G427050 Sobic005G104400--Sobic002G427050 Sobic003G309200 Sobic003G309200 Sobic001G262700--Sobic003G309200 Sobic001G262700--Sobic005G104400 Sobic003G372500 Sobic003G372500 Sobic001G262700--Sobic003G372500 Sobic005G182000 Sobic005G182000 Sobic001G262700--Sobic005G182000 Sobic007G207000 Sobic007G207000 Sobic001G262700--Sobic007G207000 Sobic002G134600 Sobic002G134600 Sobic001G262700--Sobic002G134600 Sobic009G161550 Sobic009G161550 Sobic001G262700--Sobic009G161550 Sobic001G262700--Sobic010G223700 Sobic001G262700--Sobic002G400200 Sobic008G067600 Sobic008G067600 Sobic010G025300--Sobic008G067600 Sobic010G025300--Sobic010G223700 Sobic001G315100 Sobic001G315100 Sobic010G025300--Sobic001G315100 Sobic009G056800 Sobic009G056800 Sobic010G025300--Sobic009G056800 Sobic003G012500 Sobic003G012500 Sobic010G025300--Sobic003G012500 Sobic007G118600 Sobic007G118600 Sobic010G025300--Sobic007G118600 Sobic007G132400 Sobic007G132400 Sobic010G025300--Sobic007G132400 Sobic001G512700 Sobic001G512700 Sobic010G025300--Sobic001G512700 Sobic004G117900 Sobic004G117900 Sobic010G025300--Sobic004G117900 Sobic010G223700--Sobic003G309200 Sobic003G221900 Sobic003G221900 Sobic010G223700--Sobic003G221900 Sobic001G122832 Sobic001G122832 Sobic010G223700--Sobic001G122832 Sobic010G223700--Sobic010G025300 Sobic001G425800 Sobic001G425800 Sobic010G223700--Sobic001G425800 Sobic001G389100 Sobic001G389100 Sobic010G223700--Sobic001G389100 Sobic010G223700--Sobic004G117900 Sobic003G411900 Sobic003G411900 Sobic010G223700--Sobic003G411900 Sobic003G131400 Sobic003G131400 Sobic010G223700--Sobic003G131400 Sobic007G006900 Sobic007G006900 Sobic002G400200--Sobic007G006900 Sobic002G400200--Sobic005G104400 Sobic002G400200--Sobic001G262700 Sobic002G400200--Sobic002G134600 Sobic002G400200--Sobic009G167600 Sobic010G174500 Sobic010G174500 Sobic002G400200--Sobic010G174500 Sobic004G306500 Sobic004G306500 Sobic002G400200--Sobic004G306500 Sobic003G119800 Sobic003G119800 Sobic002G400200--Sobic003G119800 Sobic002G400200--Sobic003G309200 Sobic007G037301 Sobic007G037301 Sobic010G089100--Sobic007G037301 Sobic003G087400 Sobic003G087400 Sobic010G089100--Sobic003G087400 Sobic010G089100--Sobic005G104400 Sobic002G110300 Sobic002G110300 Sobic010G089100--Sobic002G110300 Sobic001G388250 Sobic001G388250 Sobic010G089100--Sobic001G388250 Sobic010G089100--Sobic001G262700 Sobic002G114400 Sobic002G114400 Sobic010G089100--Sobic002G114400 Sobic008G027000 Sobic008G027000 Sobic010G089100--Sobic008G027000 Sobic010G089100--Sobic007G207000 Sobic009G167600--Sobic003G119800 Sobic009G167600--Sobic005G104400 Sobic003G044200 Sobic003G044200 Sobic009G167600--Sobic003G044200 Sobic006G218700 Sobic006G218700 Sobic009G167600--Sobic006G218700 Sobic009G167600--Sobic002G400200 Sobic008G025900 Sobic008G025900 Sobic009G167600--Sobic008G025900 Sobic009G167600--Sobic010G025300 Sobic003G433100 Sobic003G433100 Sobic009G167600--Sobic003G433100 Sobic009G134600 Sobic009G134600 Sobic009G167600--Sobic009G134600 Sobic009G165700 Sobic009G165700 Sobic004G091100--Sobic009G165700 Sobic001G451400 Sobic001G451400 Sobic004G091100--Sobic001G451400 Sobic010G118950 Sobic010G118950 Sobic004G091100--Sobic010G118950 Sobic009G191000 Sobic009G191000 Sobic004G091100--Sobic009G191000 Sobic008G087866 Sobic008G087866 Sobic004G091100--Sobic008G087866 Sobic001G128300 Sobic001G128300 Sobic004G091100--Sobic001G128300 Sobic001G534700 Sobic001G534700 Sobic004G091100--Sobic001G534700 Sobic003G422500 Sobic003G422500 Sobic004G091100--Sobic003G422500 Sobic001G050200 Sobic001G050200 Sobic004G091100--Sobic001G050200 Sobic007G020600--Sobic004G306500 Sobic007G020600--Sobic003G372500 Sobic001G481900 Sobic001G481900 Sobic007G020600--Sobic001G481900 Sobic007G020600--Sobic001G128300 Sobic002G187700 Sobic002G187700 Sobic007G020600--Sobic002G187700 Sobic003G029700 Sobic003G029700 Sobic007G020600--Sobic003G029700 Sobic007G020600--Sobic009G191000 Sobic003G198800 Sobic003G198800 Sobic007G020600--Sobic003G198800 Sobic010G141800 Sobic010G141800 Sobic007G020600--Sobic010G141800 Sobic009G010600 Sobic009G010600 Sobic002G427050--Sobic009G010600 Sobic002G340100 Sobic002G340100 Sobic002G427050--Sobic002G340100 Sobic002G427050--Sobic001G050200 Sobic001G390800 Sobic001G390800 Sobic002G427050--Sobic001G390800 Sobic002G315200 Sobic002G315200 Sobic002G427050--Sobic002G315200 Sobic007G060201 Sobic007G060201 Sobic002G427050--Sobic007G060201 Sobic001G107600 Sobic001G107600 Sobic002G427050--Sobic001G107600 Sobic001G137100 Sobic001G137100 Sobic002G427050--Sobic001G137100 Sobic002G427050--Sobic004G091100
Octagon: transcription factors


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