Gene annotation
Transcriptome id Sobic.009G167600.2,Sobic.009G167600.1
Synonym Sb09g022930
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
expressed protein
UniProt A0A1Z5R472 , C5YZD2
Pfam -
Panther DB PTHR33674 PTHR33674:SF3 PTHR33674 PTHR33674:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G08330 : -
RAP-DB (Rice) LOC_Os05g39060.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium KQK05828
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G119800 Expressed in older stem(PubMedID : 28649278)@no apical meristem protein, putative, expressed -
2 Sobic.005G104400 - -
3 Sobic.003G044200 C2 domain containing protein, putative, expressed -
4 Sobic.006G218700 tyrosine protein kinase domain containing protein, putative, expressed -
5 Sobic.002G400200 CS domain containing protein, putative, expressed -
6 Sobic.008G025900 expressed protein -
7 Sobic.010G025300 expressed protein -
8 Sobic.003G433100 MAC/Perforin domain containing protein, putative, expressed -
9 Sobic.009G134600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@gibberellin receptor GID1L2, putative, expressed K14493: gibberellin receptor GID1
10 Sobic.001G351700 calmodulin-binding transcription activator, putative, expressed -
11 Sobic.001G290200 leucine rich repeat containing protein, expressed -
12 Sobic.004G031600 cyclin-T1-1, putative, expressed K15188: cyclin T
13 Sobic.010G089100 nucleolar GTP-binding protein 1, putative, expressed -
14 Sobic.004G267300 bg55, putative, expressed -
15 Sobic.007G158300 phosphoglycerate mutase, putative, expressed K15634: 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
16 Sobic.009G056800 growth inhibition and differentiation-related protein 88, putative, expressed -
17 Sobic.001G173900 ACT domain containing protein, expressed -
18 Sobic.010G068500 cyclic nucleotide-gated ion channel 14, putative, expressed K05391: cyclic nucleotide gated channel, plant
19 Sobic.009G193400 AGC_AGC_other_NDRh_TRCd.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed K08790: STK38, serine/threonine kinase 38
20 Sobic.004G117900 expressed protein -


Gene co-expression network
sample Sobic009G167600 Sobic009G167600 Sobic003G119800 Sobic003G119800 Sobic009G167600--Sobic003G119800 Sobic005G104400 Sobic005G104400 Sobic009G167600--Sobic005G104400 Sobic003G044200 Sobic003G044200 Sobic009G167600--Sobic003G044200 Sobic006G218700 Sobic006G218700 Sobic009G167600--Sobic006G218700 Sobic002G400200 Sobic002G400200 Sobic009G167600--Sobic002G400200 Sobic008G025900 Sobic008G025900 Sobic009G167600--Sobic008G025900 Sobic010G025300 Sobic010G025300 Sobic009G167600--Sobic010G025300 Sobic003G433100 Sobic003G433100 Sobic009G167600--Sobic003G433100 Sobic009G134600 Sobic009G134600 Sobic009G167600--Sobic009G134600 Sobic003G119800--Sobic009G134600 Sobic008G189400 Sobic008G189400 Sobic003G119800--Sobic008G189400 Sobic001G290200 Sobic001G290200 Sobic003G119800--Sobic001G290200 Sobic009G195300 Sobic009G195300 Sobic003G119800--Sobic009G195300 Sobic004G031600 Sobic004G031600 Sobic003G119800--Sobic004G031600 Sobic001G463000 Sobic001G463000 Sobic003G119800--Sobic001G463000 Sobic001G472600 Sobic001G472600 Sobic003G119800--Sobic001G472600 Sobic009G230700 Sobic009G230700 Sobic003G119800--Sobic009G230700 Sobic003G119800--Sobic009G167600 Sobic001G262700 Sobic001G262700 Sobic005G104400--Sobic001G262700 Sobic005G104400--Sobic010G025300 Sobic010G223700 Sobic010G223700 Sobic005G104400--Sobic010G223700 Sobic005G104400--Sobic002G400200 Sobic010G089100 Sobic010G089100 Sobic005G104400--Sobic010G089100 Sobic005G104400--Sobic009G167600 Sobic004G091100 Sobic004G091100 Sobic005G104400--Sobic004G091100 Sobic007G020600 Sobic007G020600 Sobic005G104400--Sobic007G020600 Sobic002G427050 Sobic002G427050 Sobic005G104400--Sobic002G427050 Sobic001G065700 Sobic001G065700 Sobic003G044200--Sobic001G065700 Sobic001G098200 Sobic001G098200 Sobic003G044200--Sobic001G098200 Sobic006G225600 Sobic006G225600 Sobic003G044200--Sobic006G225600 Sobic005G105000 Sobic005G105000 Sobic003G044200--Sobic005G105000 Sobic003G044200--Sobic006G218700 Sobic003G044200--Sobic009G167600 Sobic001G503300 Sobic001G503300 Sobic003G044200--Sobic001G503300 Sobic009G137800 Sobic009G137800 Sobic003G044200--Sobic009G137800 Sobic009G193400 Sobic009G193400 Sobic003G044200--Sobic009G193400 Sobic006G218700--Sobic009G134600 Sobic003G396000 Sobic003G396000 Sobic006G218700--Sobic003G396000 Sobic006G218700--Sobic003G044200 Sobic006G218700--Sobic003G119800 Sobic003G379700 Sobic003G379700 Sobic006G218700--Sobic003G379700 Sobic001G076000 Sobic001G076000 Sobic006G218700--Sobic001G076000 Sobic006G218700--Sobic009G167600 Sobic003G056500 Sobic003G056500 Sobic006G218700--Sobic003G056500 Sobic003G376700 Sobic003G376700 Sobic006G218700--Sobic003G376700 Sobic007G006900 Sobic007G006900 Sobic002G400200--Sobic007G006900 Sobic002G400200--Sobic005G104400 Sobic002G400200--Sobic001G262700 Sobic002G134600 Sobic002G134600 Sobic002G400200--Sobic002G134600 Sobic002G400200--Sobic009G167600 Sobic010G174500 Sobic010G174500 Sobic002G400200--Sobic010G174500 Sobic004G306500 Sobic004G306500 Sobic002G400200--Sobic004G306500 Sobic002G400200--Sobic003G119800 Sobic003G309200 Sobic003G309200 Sobic002G400200--Sobic003G309200 Sobic002G224450 Sobic002G224450 Sobic008G025900--Sobic002G224450 Sobic005G139800 Sobic005G139800 Sobic008G025900--Sobic005G139800 Sobic004G121000 Sobic004G121000 Sobic008G025900--Sobic004G121000 Sobic005G221425 Sobic005G221425 Sobic008G025900--Sobic005G221425 Sobic009G209800 Sobic009G209800 Sobic008G025900--Sobic009G209800 Sobic001G240400 Sobic001G240400 Sobic008G025900--Sobic001G240400 Sobic009G157500 Sobic009G157500 Sobic008G025900--Sobic009G157500 Sobic005G110427 Sobic005G110427 Sobic008G025900--Sobic005G110427 Sobic008G049701 Sobic008G049701 Sobic008G025900--Sobic008G049701 Sobic008G067600 Sobic008G067600 Sobic010G025300--Sobic008G067600 Sobic010G025300--Sobic010G223700 Sobic001G315100 Sobic001G315100 Sobic010G025300--Sobic001G315100 Sobic009G056800 Sobic009G056800 Sobic010G025300--Sobic009G056800 Sobic003G012500 Sobic003G012500 Sobic010G025300--Sobic003G012500 Sobic007G118600 Sobic007G118600 Sobic010G025300--Sobic007G118600 Sobic007G132400 Sobic007G132400 Sobic010G025300--Sobic007G132400 Sobic001G512700 Sobic001G512700 Sobic010G025300--Sobic001G512700 Sobic004G117900 Sobic004G117900 Sobic010G025300--Sobic004G117900 Sobic003G433100--Sobic009G193400 Sobic001G478300 Sobic001G478300 Sobic003G433100--Sobic001G478300 Sobic007G062600 Sobic007G062600 Sobic003G433100--Sobic007G062600 Sobic004G295800 Sobic004G295800 Sobic003G433100--Sobic004G295800 Sobic004G006200 Sobic004G006200 Sobic003G433100--Sobic004G006200 Sobic009G154800 Sobic009G154800 Sobic003G433100--Sobic009G154800 Sobic009G228700 Sobic009G228700 Sobic003G433100--Sobic009G228700 Sobic002G424000 Sobic002G424000 Sobic003G433100--Sobic002G424000 Sobic004G021100 Sobic004G021100 Sobic003G433100--Sobic004G021100 Sobic009G134600--Sobic003G119800 Sobic009G134600--Sobic006G218700 Sobic009G134600--Sobic009G230700 Sobic007G178200 Sobic007G178200 Sobic009G134600--Sobic007G178200 Sobic009G059700 Sobic009G059700 Sobic009G134600--Sobic009G059700 Sobic009G134600--Sobic003G056500 Sobic002G330300 Sobic002G330300 Sobic009G134600--Sobic002G330300 Sobic009G134600--Sobic001G290200 Sobic009G134600--Sobic004G031600
Octagon: transcription factors


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