Gene annotation
Transcriptome id Sobic.006G218700.1
Synonym Sb06g028830
Functional annotation tyrosine protein kinase domain containing protein, putative, expressed
UniProt C5YG47
Pfam PF00069
Panther DB PTHR27006 PTHR27006:SF39
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G16670 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os04g52840.1 : tyrosine protein kinase domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a057048 , Zm00025a009745
Brachypodium KQJ84643 , KQJ84644
Barley -
Wheat TraesCS2B02G484300 , TraesCS2A02G462700
Populus -


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cDNA sequences
Sobic.006G218700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G134600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@gibberellin receptor GID1L2, putative, expressed K14493: gibberellin receptor GID1
2 Sobic.003G396000 copine, putative, expressed K16280: E3 ubiquitin-protein ligase RGLG
3 Sobic.003G044200 C2 domain containing protein, putative, expressed -
4 Sobic.003G119800 Expressed in older stem(PubMedID : 28649278)@no apical meristem protein, putative, expressed -
5 Sobic.003G379700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Increased expression in phyB-1 mutant(PubMedID : 26893475)@No apical meristem protein, putative, expressed -
6 Sobic.001G076000 PHLOEM 2-LIKE A10, putative, expressed -
7 Sobic.009G167600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
8 Sobic.003G056500 staphylococcal nuclease homologue, putative, expressed -
9 Sobic.003G376700 glycosyl transferase, putative, expressed -
10 Sobic.009G059700 thioredoxin, putative, expressed K03671: thioredoxin 1
11 Sobic.004G031600 cyclin-T1-1, putative, expressed K15188: cyclin T
12 Sobic.003G093900 splicing factor, putative, expressed -
13 Sobic.001G441600 potyvirus VPg interacting protein, putative, expressed -
14 Sobic.009G011700 protein kinase APK1A, chloroplast precursor, putative, expressed K04733: interleukin-1 receptor-associated kinase 4
15 Sobic.001G478300 modifier of rudimentary protein, expressed K12185: ESCRT-I complex subunit VPS37
16 Sobic.006G225600 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
17 Sobic.001G381800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.005G167300 BTBT3 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with tetratricopeptide repeats, expressed -
19 Sobic.003G081100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@OsWAK2 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed -
20 Sobic.005G046100 bZIP transcription factor domain containing protein, expressed -


Gene co-expression network
sample Sobic006G218700 Sobic006G218700 Sobic009G134600 Sobic009G134600 Sobic006G218700--Sobic009G134600 Sobic003G396000 Sobic003G396000 Sobic006G218700--Sobic003G396000 Sobic003G044200 Sobic003G044200 Sobic006G218700--Sobic003G044200 Sobic003G119800 Sobic003G119800 Sobic006G218700--Sobic003G119800 Sobic003G379700 Sobic003G379700 Sobic006G218700--Sobic003G379700 Sobic001G076000 Sobic001G076000 Sobic006G218700--Sobic001G076000 Sobic009G167600 Sobic009G167600 Sobic006G218700--Sobic009G167600 Sobic003G056500 Sobic003G056500 Sobic006G218700--Sobic003G056500 Sobic003G376700 Sobic003G376700 Sobic006G218700--Sobic003G376700 Sobic009G134600--Sobic003G119800 Sobic009G134600--Sobic006G218700 Sobic009G230700 Sobic009G230700 Sobic009G134600--Sobic009G230700 Sobic007G178200 Sobic007G178200 Sobic009G134600--Sobic007G178200 Sobic009G059700 Sobic009G059700 Sobic009G134600--Sobic009G059700 Sobic009G134600--Sobic003G056500 Sobic002G330300 Sobic002G330300 Sobic009G134600--Sobic002G330300 Sobic001G290200 Sobic001G290200 Sobic009G134600--Sobic001G290200 Sobic004G031600 Sobic004G031600 Sobic009G134600--Sobic004G031600 Sobic001G441600 Sobic001G441600 Sobic003G396000--Sobic001G441600 Sobic003G396000--Sobic006G218700 Sobic003G396000--Sobic003G379700 Sobic010G204300 Sobic010G204300 Sobic003G396000--Sobic010G204300 Sobic003G396000--Sobic001G076000 Sobic003G332401 Sobic003G332401 Sobic003G396000--Sobic003G332401 Sobic004G293700 Sobic004G293700 Sobic003G396000--Sobic004G293700 Sobic001G478300 Sobic001G478300 Sobic003G396000--Sobic001G478300 Sobic003G396000--Sobic009G059700 Sobic001G065700 Sobic001G065700 Sobic003G044200--Sobic001G065700 Sobic001G098200 Sobic001G098200 Sobic003G044200--Sobic001G098200 Sobic006G225600 Sobic006G225600 Sobic003G044200--Sobic006G225600 Sobic005G105000 Sobic005G105000 Sobic003G044200--Sobic005G105000 Sobic003G044200--Sobic006G218700 Sobic003G044200--Sobic009G167600 Sobic001G503300 Sobic001G503300 Sobic003G044200--Sobic001G503300 Sobic009G137800 Sobic009G137800 Sobic003G044200--Sobic009G137800 Sobic009G193400 Sobic009G193400 Sobic003G044200--Sobic009G193400 Sobic003G119800--Sobic009G134600 Sobic008G189400 Sobic008G189400 Sobic003G119800--Sobic008G189400 Sobic003G119800--Sobic001G290200 Sobic009G195300 Sobic009G195300 Sobic003G119800--Sobic009G195300 Sobic003G119800--Sobic004G031600 Sobic001G463000 Sobic001G463000 Sobic003G119800--Sobic001G463000 Sobic001G472600 Sobic001G472600 Sobic003G119800--Sobic001G472600 Sobic003G119800--Sobic009G230700 Sobic003G119800--Sobic009G167600 Sobic003G379700--Sobic001G076000 Sobic003G379700--Sobic003G396000 Sobic008G094700 Sobic008G094700 Sobic003G379700--Sobic008G094700 Sobic003G379700--Sobic005G105000 Sobic003G379700--Sobic006G218700 Sobic003G379700--Sobic001G478300 Sobic004G320000 Sobic004G320000 Sobic003G379700--Sobic004G320000 Sobic003G379700--Sobic003G044200 Sobic009G011700 Sobic009G011700 Sobic003G379700--Sobic009G011700 Sobic001G149700 Sobic001G149700 Sobic001G076000--Sobic001G149700 Sobic001G076000--Sobic001G478300 Sobic008G142700 Sobic008G142700 Sobic001G076000--Sobic008G142700 Sobic001G076000--Sobic003G379700 Sobic001G427800 Sobic001G427800 Sobic001G076000--Sobic001G427800 Sobic001G076000--Sobic001G441600 Sobic010G071200 Sobic010G071200 Sobic001G076000--Sobic010G071200 Sobic006G257900 Sobic006G257900 Sobic001G076000--Sobic006G257900 Sobic003G116700 Sobic003G116700 Sobic001G076000--Sobic003G116700 Sobic009G167600--Sobic003G119800 Sobic005G104400 Sobic005G104400 Sobic009G167600--Sobic005G104400 Sobic009G167600--Sobic003G044200 Sobic009G167600--Sobic006G218700 Sobic002G400200 Sobic002G400200 Sobic009G167600--Sobic002G400200 Sobic008G025900 Sobic008G025900 Sobic009G167600--Sobic008G025900 Sobic010G025300 Sobic010G025300 Sobic009G167600--Sobic010G025300 Sobic003G433100 Sobic003G433100 Sobic009G167600--Sobic003G433100 Sobic009G167600--Sobic009G134600 Sobic009G159900 Sobic009G159900 Sobic003G056500--Sobic009G159900 Sobic003G056500--Sobic009G134600 Sobic004G273200 Sobic004G273200 Sobic003G056500--Sobic004G273200 Sobic003G056500--Sobic006G218700 Sobic002G141000 Sobic002G141000 Sobic003G056500--Sobic002G141000 Sobic003G036000 Sobic003G036000 Sobic003G056500--Sobic003G036000 Sobic003G056500--Sobic009G230700 Sobic001G342600 Sobic001G342600 Sobic003G056500--Sobic001G342600 Sobic003G424500 Sobic003G424500 Sobic003G056500--Sobic003G424500 Sobic003G376700--Sobic001G441600 Sobic003G376700--Sobic006G218700 Sobic003G376700--Sobic009G134600 Sobic003G376700--Sobic002G330300 Sobic009G152200 Sobic009G152200 Sobic003G376700--Sobic009G152200 Sobic001G420700 Sobic001G420700 Sobic003G376700--Sobic001G420700 Sobic003G376700--Sobic001G076000 Sobic003G052400 Sobic003G052400 Sobic003G376700--Sobic003G052400 Sobic008G016900 Sobic008G016900 Sobic003G376700--Sobic008G016900
Octagon: transcription factors


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