Gene annotation
Transcriptome id Sobic.003G081100.2,Sobic.003G081100.1
Synonym Sb03g006800
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence (PubMedID : 27586543)
OsWAK2 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed
UniProt A0A1B6Q1Z3
Pfam PF14380 PF13947 PF00069
Panther DB PTHR27005 PTHR27005:SF25
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G18390 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os01g04450.1 : OsWAK2 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed
MaizeGDB (Corn) Zm00025a023543 , Zm00025a011296 , Zm00025a029688 , Zm00025a012726 , Zm00025a004542 , Zm00025a025630 , Zm00025a027965 , Zm00025a038864 , Zm00025a049884 , Zm00025a019005 , Zm00025a036527 , Zm00025a008603 , Zm00025a035581 , Zm00025a019136 , Zm00025a044466 , Zm00025a049886 , Zm00025a049889
Brachypodium KQK05033 , KQK05032 , KQK22781 , KQJ88913 , KQJ86265 , KQJ86007 , KQK02581 , PNT72611 , KQK01265 , PNT73106 , PNT69892 , KQK00402 , PNT69406
Barley HORVU6Hr1G058290.10 , HORVU1Hr1G083220.10 , HORVU1Hr1G083220.11 , HORVU1Hr1G083220.12 , HORVU3Hr1G007540.9 , HORVU3Hr1G007540.8 , HORVU3Hr1G007540.5 , HORVU3Hr1G007540.4 , HORVU3Hr1G007540.7 , HORVU3Hr1G007540.6 , HORVU3Hr1G007540.1 , HORVU3Hr1G007540.3 , HORVU3Hr1G007540.11 , HORVU3Hr1G007540.10 , HORVU5Hr1G016730.6 , HORVU6Hr1G058290.2 , HORVU6Hr1G058290.3 , HORVU6Hr1G058290.4 , HORVU6Hr1G058290.5 , HORVU6Hr1G058290.6 , HORVU6Hr1G058290.7 , HORVU6Hr1G058290.8 , HORVU6Hr1G058290.9 , HORVU4Hr1G066310.10 , HORVU4Hr1G066310.11 , HORVU1Hr1G083220.3 , HORVU1Hr1G083220.6 , HORVU1Hr1G083220.4 , HORVU1Hr1G083220.9 , HORVU4Hr1G016080.1 , HORVU3Hr1G007590.2 , HORVU3Hr1G007590.3 , HORVU3Hr1G007590.1 , HORVU3Hr1G007590.6 , HORVU3Hr1G007590.7 , HORVU3Hr1G007590.4 , HORVU3Hr1G007590.5 , HORVU5Hr1G021940.1 , HORVU5Hr1G016730.14 , HORVU5Hr1G016730.11 , HORVU5Hr1G016730.12 , HORVU5Hr1G016730.13 , HORVU5Hr1G021940.7 , HORVU5Hr1G021940.6 , HORVU5Hr1G021940.5 , HORVU5Hr1G021940.4 , HORVU5Hr1G016730.7 , HORVU5Hr1G016730.2 , HORVU5Hr1G016730.3 , HORVU5Hr1G016730.8 , HORVU5Hr1G016730.9 , HORVU4Hr1G066310.2 , HORVU4Hr1G066310.8 , HORVU4Hr1G066310.9 , HORVU3Hr1G064110.11 , HORVU3Hr1G064110.10 , HORVU3Hr1G064110.13 , HORVU3Hr1G064110.12 , HORVU3Hr1G064110.15 , HORVU3Hr1G064110.14 , HORVU4Hr1G070870.8 , HORVU4Hr1G070870.1 , HORVU4Hr1G070870.2 , HORVU4Hr1G070870.3 , HORVU4Hr1G070870.4 , HORVU4Hr1G070870.5 , HORVU4Hr1G070870.6 , HORVU4Hr1G070870.7 , HORVU3Hr1G064110.9 , HORVU3Hr1G064110.8 , HORVU3Hr1G064110.5 , HORVU3Hr1G064110.7 , HORVU3Hr1G064110.6 , HORVU3Hr1G064110.1 , HORVU3Hr1G064110.3 , HORVU3Hr1G064110.2 , HORVU6Hr1G058280.4 , HORVU6Hr1G058280.1 , HORVU3Hr1G007540.2
Wheat TraesCS3A02G033000 , TraesCS5D02G281200 , TraesCS1B02G394900 , TraesCS6A02G225400 , TraesCS3D02G048000 , TraesCS6D02G210100 , TraesCS4D02G238900 , TraesCS3D02G262200 , TraesCS5A02G274100 , TraesCS4B02G238700 , TraesCS5B02G273500 , TraesCS6D02G210200 , TraesCSU02G047400 , TraesCS3A02G262100 , TraesCS3A02G262100 , TraesCS3A02G262100 , TraesCS3A02G262100 , TraesCS6B02G256200 , TraesCS3D02G045200 , TraesCS5B02G069900 , TraesCS3D02G262200 , TraesCS4A02G062000 , TraesCS6A02G225300 , TraesCS3D02G045200 , TraesCS3D02G045200 , TraesCS3D02G045200 , TraesCS3D02G045200 , TraesCS3D02G045200 , TraesCS3D02G045200 , TraesCS3D02G045200 , TraesCS3D02G045200 , TraesCS1D02G381800 , TraesCSU02G047400 , TraesCS1A02G374700 , TraesCS6B02G256300 , TraesCS5D02G073900 , TraesCS3B02G295400 , TraesCS3B02G295400 , TraesCS3B02G295400 , TraesCS3B02G295400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G153600 exo70 exocyst complex subunit domain containing protein, expressed K07195: EXOC7, exocyst complex component 7
2 Sobic.003G079900 Ser/Thr protein kinase, putative, expressed K04730: interleukin-1 receptor-associated kinase 1
3 Sobic.009G137800 expressed protein -
4 Sobic.003G333600 OsFBX29 - F-box domain containing protein, expressed -
5 Sobic.001G351700 calmodulin-binding transcription activator, putative, expressed -
6 Sobic.001G290200 leucine rich repeat containing protein, expressed -
7 Sobic.003G305400 exo70 exocyst complex subunit domain containing protein, expressed K07195: EXOC7, exocyst complex component 7
8 Sobic.007G026500 OsFBK21 - F-box domain and kelch repeat containing protein, expressed -
9 Sobic.001G424700 CAMK_CAMK_like_ULKh_APGy.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K08269: ULK2, serine/threonine-protein kinase ULK2
10 Sobic.003G093300 - -
11 Sobic.010G260500 pre-mRNA-splicing factor syf2, putative, expressed K12868: pre-mRNA-splicing factor SYF2
12 Sobic.001G451000 two-component response regulator, putative, expressed K14491: two-component response regulator ARR-B family
13 Sobic.009G172400 VHS and GAT domain containing protein, expressed -
14 Sobic.003G433100 MAC/Perforin domain containing protein, putative, expressed -
15 Sobic.001G028700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.006G218700 tyrosine protein kinase domain containing protein, putative, expressed -
17 Sobic.009G183200 Ca ATPase 6(PubMedID : 22196357)@calcium-transporting ATPase, plasma membrane-type, putative, expressed K01537: P-type Ca2+ transporter type 2C
18 Sobic.004G320000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.008G094700 no apical meristem protein, putative, expressed -
20 Sobic.007G078000 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L


Gene co-expression network
sample Sobic003G081100 Sobic003G081100 Sobic004G153600 Sobic004G153600 Sobic003G081100--Sobic004G153600 Sobic003G079900 Sobic003G079900 Sobic003G081100--Sobic003G079900 Sobic009G137800 Sobic009G137800 Sobic003G081100--Sobic009G137800 Sobic003G333600 Sobic003G333600 Sobic003G081100--Sobic003G333600 Sobic001G351700 Sobic001G351700 Sobic003G081100--Sobic001G351700 Sobic001G290200 Sobic001G290200 Sobic003G081100--Sobic001G290200 Sobic003G305400 Sobic003G305400 Sobic003G081100--Sobic003G305400 Sobic007G026500 Sobic007G026500 Sobic003G081100--Sobic007G026500 Sobic001G424700 Sobic001G424700 Sobic003G081100--Sobic001G424700 Sobic004G153600--Sobic001G424700 Sobic004G153600--Sobic003G081100 Sobic004G153600--Sobic003G333600 Sobic004G153600--Sobic009G137800 Sobic010G260500 Sobic010G260500 Sobic004G153600--Sobic010G260500 Sobic007G078000 Sobic007G078000 Sobic004G153600--Sobic007G078000 Sobic003G324000 Sobic003G324000 Sobic004G153600--Sobic003G324000 Sobic002G284200 Sobic002G284200 Sobic004G153600--Sobic002G284200 Sobic008G094700 Sobic008G094700 Sobic004G153600--Sobic008G094700 Sobic003G079900--Sobic003G081100 Sobic002G115801 Sobic002G115801 Sobic003G079900--Sobic002G115801 Sobic008G025900 Sobic008G025900 Sobic003G079900--Sobic008G025900 Sobic001G451000 Sobic001G451000 Sobic003G079900--Sobic001G451000 Sobic003G244800 Sobic003G244800 Sobic003G079900--Sobic003G244800 Sobic003G093600 Sobic003G093600 Sobic003G079900--Sobic003G093600 Sobic005G167300 Sobic005G167300 Sobic003G079900--Sobic005G167300 Sobic005G055150 Sobic005G055150 Sobic003G079900--Sobic005G055150 Sobic006G209500 Sobic006G209500 Sobic003G079900--Sobic006G209500 Sobic009G137800--Sobic004G153600 Sobic008G189400 Sobic008G189400 Sobic009G137800--Sobic008G189400 Sobic004G267300 Sobic004G267300 Sobic009G137800--Sobic004G267300 Sobic003G185200 Sobic003G185200 Sobic009G137800--Sobic003G185200 Sobic009G137800--Sobic008G025900 Sobic009G137800--Sobic001G424700 Sobic009G087800 Sobic009G087800 Sobic009G137800--Sobic009G087800 Sobic001G022100 Sobic001G022100 Sobic009G137800--Sobic001G022100 Sobic009G137800--Sobic010G260500 Sobic003G333600--Sobic007G078000 Sobic003G333600--Sobic001G424700 Sobic003G333600--Sobic001G451000 Sobic003G333600--Sobic010G260500 Sobic004G196700 Sobic004G196700 Sobic003G333600--Sobic004G196700 Sobic001G372700 Sobic001G372700 Sobic003G333600--Sobic001G372700 Sobic007G185900 Sobic007G185900 Sobic003G333600--Sobic007G185900 Sobic003G333600--Sobic004G153600 Sobic005G149500 Sobic005G149500 Sobic003G333600--Sobic005G149500 Sobic007G134600 Sobic007G134600 Sobic001G351700--Sobic007G134600 Sobic001G351700--Sobic004G267300 Sobic001G351700--Sobic001G290200 Sobic004G021100 Sobic004G021100 Sobic001G351700--Sobic004G021100 Sobic009G056800 Sobic009G056800 Sobic001G351700--Sobic009G056800 Sobic001G306000 Sobic001G306000 Sobic001G351700--Sobic001G306000 Sobic003G433100 Sobic003G433100 Sobic001G351700--Sobic003G433100 Sobic009G172400 Sobic009G172400 Sobic001G351700--Sobic009G172400 Sobic001G371200 Sobic001G371200 Sobic001G351700--Sobic001G371200 Sobic001G290200--Sobic009G137800 Sobic003G119800 Sobic003G119800 Sobic001G290200--Sobic003G119800 Sobic005G046100 Sobic005G046100 Sobic001G290200--Sobic005G046100 Sobic001G290200--Sobic001G351700 Sobic001G290200--Sobic008G025900 Sobic001G290200--Sobic010G260500 Sobic002G324200 Sobic002G324200 Sobic001G290200--Sobic002G324200 Sobic001G290200--Sobic003G081100 Sobic001G290200--Sobic005G167300 Sobic010G145900 Sobic010G145900 Sobic003G305400--Sobic010G145900 Sobic009G235900 Sobic009G235900 Sobic003G305400--Sobic009G235900 Sobic003G305400--Sobic006G209500 Sobic001G478300 Sobic001G478300 Sobic003G305400--Sobic001G478300 Sobic001G347600 Sobic001G347600 Sobic003G305400--Sobic001G347600 Sobic001G372000 Sobic001G372000 Sobic003G305400--Sobic001G372000 Sobic003G154700 Sobic003G154700 Sobic003G305400--Sobic003G154700 Sobic003G305400--Sobic003G081100 Sobic010G264400 Sobic010G264400 Sobic003G305400--Sobic010G264400 Sobic003G093300 Sobic003G093300 Sobic007G026500--Sobic003G093300 Sobic004G295800 Sobic004G295800 Sobic007G026500--Sobic004G295800 Sobic009G121100 Sobic009G121100 Sobic007G026500--Sobic009G121100 Sobic007G026500--Sobic004G021100 Sobic003G407300 Sobic003G407300 Sobic007G026500--Sobic003G407300 Sobic004G052900 Sobic004G052900 Sobic007G026500--Sobic004G052900 Sobic002G340100 Sobic002G340100 Sobic007G026500--Sobic002G340100 Sobic001G154100 Sobic001G154100 Sobic007G026500--Sobic001G154100 Sobic001G253700 Sobic001G253700 Sobic007G026500--Sobic001G253700 Sobic001G424700--Sobic007G078000 Sobic001G424700--Sobic003G333600 Sobic001G424700--Sobic005G149500 Sobic001G424700--Sobic004G196700 Sobic001G424700--Sobic003G093600 Sobic001G424700--Sobic009G087800 Sobic001G424700--Sobic010G260500 Sobic007G205800 Sobic007G205800 Sobic001G424700--Sobic007G205800 Sobic004G205600 Sobic004G205600 Sobic001G424700--Sobic004G205600
Octagon: transcription factors


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