Gene annotation
Transcriptome id Sobic.003G079900.1,Sobic.003G079900.2
Synonym
Functional annotation Ser/Thr protein kinase, putative, expressed
UniProt A0A1B6Q1Y3 , A0A1B6Q1Y6
Pfam PF14380 PF13947 PF07714
Panther DB PTHR27009 PTHR27009:SF10
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology K04730; interleukin-1 receptor-associated kinase 1
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G66910 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os01g04520.1 : Ser/Thr protein kinase, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQK02582
Barley -
Wheat TraesCS3D02G048400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G081100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@OsWAK2 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed -
2 Sobic.002G115801 - -
3 Sobic.008G025900 expressed protein -
4 Sobic.001G451000 two-component response regulator, putative, expressed K14491: two-component response regulator ARR-B family
5 Sobic.003G244800 - -
6 Sobic.003G093600 methyltransferase, putative, expressed -
7 Sobic.005G167300 BTBT3 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with tetratricopeptide repeats, expressed -
8 Sobic.005G055150 - -
9 Sobic.006G209500 transcription initiation factor IIE subunit beta, putative, expressed K03137: TFIIE2, GTF2E2, transcription initiation factor TFIIE subunit beta
10 Sobic.009G156000 arginyl-tRNA--protein transferase 1, putative, expressed K00685: arginyl-tRNA---protein transferase
11 Sobic.002G410200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.009G137800 expressed protein -
13 Sobic.003G333600 OsFBX29 - F-box domain containing protein, expressed -
14 Sobic.002G284200 peroxisomal multifunctional enzyme type 2, putative, expressed -
15 Sobic.004G153600 exo70 exocyst complex subunit domain containing protein, expressed K07195: EXOC7, exocyst complex component 7
16 Sobic.004G188300 regulation of Al tolerance genes and proton tolerance genes(PubMedID : 29541086)@ZOS2-11 - C2H2 zinc finger protein, expressed -
17 Sobic.007G023700 MA3 domain containing protein, expressed -
18 Sobic.004G076732 - K14800: pre-rRNA-processing protein TSR2
19 Sobic.003G026300 BES1/BZR1 homolog protein, putative, expressed -
20 Sobic.001G424700 CAMK_CAMK_like_ULKh_APGy.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K08269: ULK2, serine/threonine-protein kinase ULK2


Gene co-expression network
sample Sobic003G079900 Sobic003G079900 Sobic003G081100 Sobic003G081100 Sobic003G079900--Sobic003G081100 Sobic002G115801 Sobic002G115801 Sobic003G079900--Sobic002G115801 Sobic008G025900 Sobic008G025900 Sobic003G079900--Sobic008G025900 Sobic001G451000 Sobic001G451000 Sobic003G079900--Sobic001G451000 Sobic003G244800 Sobic003G244800 Sobic003G079900--Sobic003G244800 Sobic003G093600 Sobic003G093600 Sobic003G079900--Sobic003G093600 Sobic005G167300 Sobic005G167300 Sobic003G079900--Sobic005G167300 Sobic005G055150 Sobic005G055150 Sobic003G079900--Sobic005G055150 Sobic006G209500 Sobic006G209500 Sobic003G079900--Sobic006G209500 Sobic004G153600 Sobic004G153600 Sobic003G081100--Sobic004G153600 Sobic003G081100--Sobic003G079900 Sobic009G137800 Sobic009G137800 Sobic003G081100--Sobic009G137800 Sobic003G333600 Sobic003G333600 Sobic003G081100--Sobic003G333600 Sobic001G351700 Sobic001G351700 Sobic003G081100--Sobic001G351700 Sobic001G290200 Sobic001G290200 Sobic003G081100--Sobic001G290200 Sobic003G305400 Sobic003G305400 Sobic003G081100--Sobic003G305400 Sobic007G026500 Sobic007G026500 Sobic003G081100--Sobic007G026500 Sobic001G424700 Sobic001G424700 Sobic003G081100--Sobic001G424700 Sobic002G115801--Sobic001G451000 Sobic002G115801--Sobic005G167300 Sobic001G287301 Sobic001G287301 Sobic002G115801--Sobic001G287301 SobicK009900 SobicK009900 Sobic002G115801--SobicK009900 SobicK016900 SobicK016900 Sobic002G115801--SobicK016900 Sobic002G115801--Sobic003G244800 Sobic003G393300 Sobic003G393300 Sobic002G115801--Sobic003G393300 Sobic007G211000 Sobic007G211000 Sobic002G115801--Sobic007G211000 Sobic003G117000 Sobic003G117000 Sobic002G115801--Sobic003G117000 Sobic002G224450 Sobic002G224450 Sobic008G025900--Sobic002G224450 Sobic005G139800 Sobic005G139800 Sobic008G025900--Sobic005G139800 Sobic004G121000 Sobic004G121000 Sobic008G025900--Sobic004G121000 Sobic005G221425 Sobic005G221425 Sobic008G025900--Sobic005G221425 Sobic009G209800 Sobic009G209800 Sobic008G025900--Sobic009G209800 Sobic001G240400 Sobic001G240400 Sobic008G025900--Sobic001G240400 Sobic009G157500 Sobic009G157500 Sobic008G025900--Sobic009G157500 Sobic005G110427 Sobic005G110427 Sobic008G025900--Sobic005G110427 Sobic008G049701 Sobic008G049701 Sobic008G025900--Sobic008G049701 Sobic001G451000--Sobic005G167300 Sobic001G451000--Sobic002G115801 Sobic010G260500 Sobic010G260500 Sobic001G451000--Sobic010G260500 Sobic002G284200 Sobic002G284200 Sobic001G451000--Sobic002G284200 Sobic001G451000--Sobic003G333600 Sobic007G078000 Sobic007G078000 Sobic001G451000--Sobic007G078000 Sobic001G439500 Sobic001G439500 Sobic001G451000--Sobic001G439500 Sobic004G198000 Sobic004G198000 Sobic001G451000--Sobic004G198000 Sobic004G196700 Sobic004G196700 Sobic001G451000--Sobic004G196700 Sobic002G410200 Sobic002G410200 Sobic003G244800--Sobic002G410200 Sobic004G076732 Sobic004G076732 Sobic003G244800--Sobic004G076732 Sobic003G244800--SobicK009900 Sobic001G253100 Sobic001G253100 Sobic003G244800--Sobic001G253100 Sobic003G244800--Sobic009G209800 Sobic008G009500 Sobic008G009500 Sobic003G244800--Sobic008G009500 Sobic008G042250 Sobic008G042250 Sobic003G244800--Sobic008G042250 Sobic004G212800 Sobic004G212800 Sobic003G244800--Sobic004G212800 Sobic003G244800--Sobic008G049701 Sobic007G023700 Sobic007G023700 Sobic003G093600--Sobic007G023700 Sobic009G022200 Sobic009G022200 Sobic003G093600--Sobic009G022200 Sobic004G271900 Sobic004G271900 Sobic003G093600--Sobic004G271900 Sobic007G205800 Sobic007G205800 Sobic003G093600--Sobic007G205800 Sobic004G143700 Sobic004G143700 Sobic003G093600--Sobic004G143700 Sobic009G156000 Sobic009G156000 Sobic003G093600--Sobic009G156000 Sobic009G087800 Sobic009G087800 Sobic003G093600--Sobic009G087800 Sobic003G258400 Sobic003G258400 Sobic003G093600--Sobic003G258400 Sobic003G093600--Sobic001G424700 Sobic005G167300--Sobic001G451000 Sobic005G167300--Sobic002G115801 Sobic005G167300--Sobic004G198000 Sobic003G026300 Sobic003G026300 Sobic005G167300--Sobic003G026300 Sobic005G167300--Sobic002G284200 Sobic005G167300--SobicK016900 Sobic007G150200 Sobic007G150200 Sobic005G167300--Sobic007G150200 Sobic004G188300 Sobic004G188300 Sobic005G167300--Sobic004G188300 Sobic005G167300--Sobic003G117000 Sobic006G009400 Sobic006G009400 Sobic005G055150--Sobic006G009400 Sobic005G141801 Sobic005G141801 Sobic005G055150--Sobic005G141801 Sobic005G055150--Sobic005G110427 Sobic001G111900 Sobic001G111900 Sobic005G055150--Sobic001G111900 Sobic006G262200 Sobic006G262200 Sobic005G055150--Sobic006G262200 Sobic009G127900 Sobic009G127900 Sobic005G055150--Sobic009G127900 Sobic005G055150--Sobic002G410200 Sobic005G055150--Sobic009G209800 Sobic007G178700 Sobic007G178700 Sobic005G055150--Sobic007G178700 Sobic001G478300 Sobic001G478300 Sobic006G209500--Sobic001G478300 Sobic006G209500--Sobic004G271900 Sobic006G088100 Sobic006G088100 Sobic006G209500--Sobic006G088100 Sobic006G209500--Sobic003G093600 Sobic002G324200 Sobic002G324200 Sobic006G209500--Sobic002G324200 Sobic009G117400 Sobic009G117400 Sobic006G209500--Sobic009G117400 Sobic004G150400 Sobic004G150400 Sobic006G209500--Sobic004G150400 Sobic002G262600 Sobic002G262600 Sobic006G209500--Sobic002G262600 Sobic006G209500--Sobic007G205800
Octagon: transcription factors


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