Gene annotation
Transcriptome id Sobic.001G028700.1
Synonym Sb01g002710
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
expressed protein
UniProt C5WU36
Pfam PF10294
Panther DB PTHR14614 PTHR14614:SF42
NCBI CDD KOG3201; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G01470 : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RAP-DB (Rice) LOC_Os03g61140.1 : expressed protein
MaizeGDB (Corn) Zm00025a008884
Brachypodium KQK12371
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G111366 - -
2 Sobic.001G111500 far-red light perception and signal transduction(PubMedID : 14963106)@phytochrome A, putative, expressed K12120: phytochrome A
3 Sobic.004G297400 enoyl-CoA hydratase/isomerase family protein, putative, expressed K05607: methylglutaconyl-CoA hydratase
4 Sobic.010G042900 expressed protein -
5 Sobic.009G235900 transporter family protein, putative, expressed K08145: SLC2A8, MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 8
6 Sobic.004G006300 translationally-controlled tumor protein, putative, expressed -
7 Sobic.004G034400 plant-specific domain TIGR01589 family protein, putative, expressed -
8 Sobic.006G209500 transcription initiation factor IIE subunit beta, putative, expressed K03137: TFIIE2, GTF2E2, transcription initiation factor TFIIE subunit beta
9 Sobic.009G027000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@acyl-coenzyme A dehydrogenase, mitochondrial precursor, putative, expressed K00253: IVD, isovaleryl-CoA dehydrogenase
10 Sobic.003G093300 - -
11 Sobic.004G153400 OsFBK7 - F-box domain and kelch repeat containing protein, expressed -
12 Sobic.003G305400 exo70 exocyst complex subunit domain containing protein, expressed K07195: EXOC7, exocyst complex component 7
13 Sobic.003G145900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@acyltransferase, putative, expressed K13510: lysophosphatidylcholine acyltransferase / lyso-PAF acetyltransferase
14 Sobic.010G199600 hydrolase, NUDIX family, domain containing protein, expressed -
15 Sobic.001G031200 Methyltransferase small domain containing protein, expressed K02493: hemK, prmC, release factor glutamine methyltransferase
16 Sobic.001G194900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@FAD dependent oxidoreductase domain containing protein, expressed K00311: electron-transferring-flavoprotein dehydrogenase
17 Sobic.008G160700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial precursor, putative, expressed K01968: 3-methylcrotonyl-CoA carboxylase alpha subunit
18 Sobic.006G122400 uncharacterized glycosyltransferase, putative, expressed -
19 Sobic.001G359400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
20 Sobic.001G478300 modifier of rudimentary protein, expressed K12185: ESCRT-I complex subunit VPS37


Gene co-expression network
sample Sobic001G028700 Sobic001G028700 Sobic001G111366 Sobic001G111366 Sobic001G028700--Sobic001G111366 Sobic001G111500 Sobic001G111500 Sobic001G028700--Sobic001G111500 Sobic004G297400 Sobic004G297400 Sobic001G028700--Sobic004G297400 Sobic010G042900 Sobic010G042900 Sobic001G028700--Sobic010G042900 Sobic009G235900 Sobic009G235900 Sobic001G028700--Sobic009G235900 Sobic004G006300 Sobic004G006300 Sobic001G028700--Sobic004G006300 Sobic004G034400 Sobic004G034400 Sobic001G028700--Sobic004G034400 Sobic006G209500 Sobic006G209500 Sobic001G028700--Sobic006G209500 Sobic009G027000 Sobic009G027000 Sobic001G028700--Sobic009G027000 Sobic001G111366--Sobic001G111500 Sobic001G111366--Sobic001G028700 Sobic001G111366--Sobic004G006300 Sobic001G111366--Sobic009G235900 Sobic001G111366--Sobic010G042900 Sobic001G154100 Sobic001G154100 Sobic001G111366--Sobic001G154100 Sobic004G256600 Sobic004G256600 Sobic001G111366--Sobic004G256600 Sobic004G153400 Sobic004G153400 Sobic001G111366--Sobic004G153400 Sobic010G001600 Sobic010G001600 Sobic001G111366--Sobic010G001600 Sobic001G111500--Sobic001G111366 Sobic001G111500--Sobic001G028700 Sobic001G111500--Sobic001G154100 Sobic001G111500--Sobic004G153400 Sobic001G111500--Sobic004G006300 Sobic003G093300 Sobic003G093300 Sobic001G111500--Sobic003G093300 Sobic001G111500--Sobic010G042900 Sobic001G111500--Sobic004G297400 Sobic001G111500--Sobic009G235900 Sobic004G297400--Sobic009G027000 Sobic004G297400--Sobic001G028700 Sobic006G122400 Sobic006G122400 Sobic004G297400--Sobic006G122400 Sobic010G078100 Sobic010G078100 Sobic004G297400--Sobic010G078100 Sobic004G297400--Sobic010G042900 Sobic008G160700 Sobic008G160700 Sobic004G297400--Sobic008G160700 Sobic004G297400--Sobic001G111366 Sobic007G002200 Sobic007G002200 Sobic004G297400--Sobic007G002200 Sobic004G297400--Sobic001G111500 Sobic003G093600 Sobic003G093600 Sobic010G042900--Sobic003G093600 Sobic007G023700 Sobic007G023700 Sobic010G042900--Sobic007G023700 Sobic001G347600 Sobic001G347600 Sobic010G042900--Sobic001G347600 Sobic005G007800 Sobic005G007800 Sobic010G042900--Sobic005G007800 Sobic010G042900--Sobic004G034400 Sobic010G042900--Sobic001G028700 Sobic010G042900--Sobic009G235900 Sobic009G117400 Sobic009G117400 Sobic010G042900--Sobic009G117400 Sobic006G129700 Sobic006G129700 Sobic010G042900--Sobic006G129700 Sobic001G194900 Sobic001G194900 Sobic009G235900--Sobic001G194900 Sobic002G188500 Sobic002G188500 Sobic009G235900--Sobic002G188500 Sobic009G235900--Sobic008G160700 Sobic001G359400 Sobic001G359400 Sobic009G235900--Sobic001G359400 Sobic009G235900--Sobic005G007800 Sobic009G235900--Sobic010G042900 Sobic003G005800 Sobic003G005800 Sobic009G235900--Sobic003G005800 Sobic003G145900 Sobic003G145900 Sobic009G235900--Sobic003G145900 Sobic009G235900--Sobic001G347600 Sobic009G178600 Sobic009G178600 Sobic004G006300--Sobic009G178600 Sobic009G117300 Sobic009G117300 Sobic004G006300--Sobic009G117300 Sobic006G254700 Sobic006G254700 Sobic004G006300--Sobic006G254700 Sobic004G006300--Sobic006G209500 Sobic004G348100 Sobic004G348100 Sobic004G006300--Sobic004G348100 Sobic001G428400 Sobic001G428400 Sobic004G006300--Sobic001G428400 Sobic004G006300--Sobic009G117400 Sobic004G006300--Sobic001G111366 Sobic004G006300--Sobic001G028700 Sobic004G034400--Sobic010G042900 Sobic002G010300 Sobic002G010300 Sobic004G034400--Sobic002G010300 Sobic009G054700 Sobic009G054700 Sobic004G034400--Sobic009G054700 Sobic004G034400--Sobic006G209500 Sobic004G034400--Sobic009G178600 Sobic001G085500 Sobic001G085500 Sobic004G034400--Sobic001G085500 Sobic001G478300 Sobic001G478300 Sobic004G034400--Sobic001G478300 Sobic002G132300 Sobic002G132300 Sobic004G034400--Sobic002G132300 Sobic004G320000 Sobic004G320000 Sobic004G034400--Sobic004G320000 Sobic006G209500--Sobic001G478300 Sobic004G271900 Sobic004G271900 Sobic006G209500--Sobic004G271900 Sobic006G088100 Sobic006G088100 Sobic006G209500--Sobic006G088100 Sobic006G209500--Sobic003G093600 Sobic002G324200 Sobic002G324200 Sobic006G209500--Sobic002G324200 Sobic006G209500--Sobic009G117400 Sobic004G150400 Sobic004G150400 Sobic006G209500--Sobic004G150400 Sobic002G262600 Sobic002G262600 Sobic006G209500--Sobic002G262600 Sobic007G205800 Sobic007G205800 Sobic006G209500--Sobic007G205800 Sobic009G027000--Sobic006G122400 Sobic005G181000 Sobic005G181000 Sobic009G027000--Sobic005G181000 Sobic009G027000--Sobic008G160700 Sobic009G027000--Sobic004G297400 Sobic009G027000--Sobic010G078100 Sobic007G130600 Sobic007G130600 Sobic009G027000--Sobic007G130600 Sobic001G156100 Sobic001G156100 Sobic009G027000--Sobic001G156100 Sobic007G078000 Sobic007G078000 Sobic009G027000--Sobic007G078000 Sobic009G027000--Sobic004G320000
Octagon: transcription factors


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