Gene annotation
Transcriptome id Sobic.004G153400.1
Synonym Sb04g020510
Functional annotation OsFBK7 - F-box domain and kelch repeat containing protein, expressed
UniProt C5XSJ9
Pfam PF01344
Panther DB PTHR24412 PTHR24412:SF0
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G67480 : Galactose oxidase/kelch repeat superfamily protein
RAP-DB (Rice) LOC_Os02g30210.1 : OsFBK7 - F-box domain and kelch repeat containing protein, expressed
MaizeGDB (Corn) Zm00025a020389
Brachypodium KQJ99566
Barley HORVU3Hr1G096780.1 , HORVU3Hr1G096780.3 , HORVU3Hr1G096780.2
Wheat TraesCS3A02G446400 , TraesCS3B02G481500 , TraesCS3D02G439000
Populus -


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cDNA sequences
Sobic.004G153400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G153501 - -
2 Sobic.002G046800 transketolase, putative, expressed K00167: BCKDHB, 2-oxoisovalerate dehydrogenase E1 component beta subunit
3 Sobic.003G093300 - -
4 Sobic.001G111500 far-red light perception and signal transduction(PubMedID : 14963106)@phytochrome A, putative, expressed K12120: phytochrome A
5 Sobic.001G123000 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
6 Sobic.002G226000 leucine-rich repeat family protein, putative, expressed -
7 Sobic.001G111366 - -
8 Sobic.007G148200 auxin-repressed protein, putative, expressed -
9 Sobic.009G235900 transporter family protein, putative, expressed K08145: SLC2A8, MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 8
10 Sobic.007G190333 - -
11 Sobic.001G028700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.006G138400 regulatory subunit, putative, expressed -
13 Sobic.003G005800 salt stress root protein RS1, putative, expressed -
14 Sobic.001G194900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@FAD dependent oxidoreductase domain containing protein, expressed K00311: electron-transferring-flavoprotein dehydrogenase
15 Sobic.007G177000 OsAPx4 - Peroxisomal Ascorbate Peroxidase encoding gene 5,8,9, expressed K00434: L-ascorbate peroxidase
16 Sobic.003G324000 3-hydroxybutyryl-CoA dehydrogenase, putative, expressed K00074: paaH, hbd, fadB, 3-hydroxybutyryl-CoA dehydrogenase
17 Sobic.007G026500 OsFBK21 - F-box domain and kelch repeat containing protein, expressed -
18 Sobic.001G048766 - -
19 Sobic.003G069500 regulator of ribonuclease, putative, expressed -
20 Sobic.006G149700 DUF584 domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic004G153400 Sobic004G153400 Sobic004G153501 Sobic004G153501 Sobic004G153400--Sobic004G153501 Sobic002G046800 Sobic002G046800 Sobic004G153400--Sobic002G046800 Sobic003G093300 Sobic003G093300 Sobic004G153400--Sobic003G093300 Sobic001G111500 Sobic001G111500 Sobic004G153400--Sobic001G111500 Sobic001G123000 Sobic001G123000 Sobic004G153400--Sobic001G123000 Sobic002G226000 Sobic002G226000 Sobic004G153400--Sobic002G226000 Sobic001G111366 Sobic001G111366 Sobic004G153400--Sobic001G111366 Sobic007G148200 Sobic007G148200 Sobic004G153400--Sobic007G148200 Sobic009G235900 Sobic009G235900 Sobic004G153400--Sobic009G235900 Sobic004G153501--Sobic004G153400 Sobic004G153501--Sobic002G046800 Sobic006G138400 Sobic006G138400 Sobic004G153501--Sobic006G138400 Sobic003G069500 Sobic003G069500 Sobic004G153501--Sobic003G069500 Sobic004G153501--Sobic003G093300 Sobic004G153501--Sobic001G123000 Sobic004G153501--Sobic007G148200 Sobic001G048766 Sobic001G048766 Sobic004G153501--Sobic001G048766 Sobic007G190333 Sobic007G190333 Sobic004G153501--Sobic007G190333 Sobic002G046800--Sobic004G153501 Sobic002G046800--Sobic003G069500 Sobic002G046800--Sobic006G138400 Sobic002G046800--Sobic004G153400 Sobic001G535800 Sobic001G535800 Sobic002G046800--Sobic001G535800 Sobic006G214500 Sobic006G214500 Sobic002G046800--Sobic006G214500 Sobic001G543800 Sobic001G543800 Sobic002G046800--Sobic001G543800 Sobic004G052900 Sobic004G052900 Sobic002G046800--Sobic004G052900 Sobic009G249200 Sobic009G249200 Sobic002G046800--Sobic009G249200 Sobic007G026500 Sobic007G026500 Sobic003G093300--Sobic007G026500 Sobic009G121100 Sobic009G121100 Sobic003G093300--Sobic009G121100 Sobic004G295800 Sobic004G295800 Sobic003G093300--Sobic004G295800 Sobic008G191100 Sobic008G191100 Sobic003G093300--Sobic008G191100 Sobic003G093300--Sobic004G153400 Sobic003G093300--Sobic006G138400 Sobic003G093300--Sobic006G214500 Sobic001G373200 Sobic001G373200 Sobic003G093300--Sobic001G373200 Sobic003G407300 Sobic003G407300 Sobic003G093300--Sobic003G407300 Sobic001G111500--Sobic001G111366 Sobic001G028700 Sobic001G028700 Sobic001G111500--Sobic001G028700 Sobic001G154100 Sobic001G154100 Sobic001G111500--Sobic001G154100 Sobic001G111500--Sobic004G153400 Sobic004G006300 Sobic004G006300 Sobic001G111500--Sobic004G006300 Sobic001G111500--Sobic003G093300 Sobic010G042900 Sobic010G042900 Sobic001G111500--Sobic010G042900 Sobic004G297400 Sobic004G297400 Sobic001G111500--Sobic004G297400 Sobic001G111500--Sobic009G235900 Sobic007G007000 Sobic007G007000 Sobic001G123000--Sobic007G007000 Sobic009G259400 Sobic009G259400 Sobic001G123000--Sobic009G259400 Sobic003G344900 Sobic003G344900 Sobic001G123000--Sobic003G344900 Sobic001G120300 Sobic001G120300 Sobic001G123000--Sobic001G120300 Sobic001G098200 Sobic001G098200 Sobic001G123000--Sobic001G098200 Sobic010G090900 Sobic010G090900 Sobic001G123000--Sobic010G090900 Sobic006G114500 Sobic006G114500 Sobic001G123000--Sobic006G114500 Sobic005G091600 Sobic005G091600 Sobic001G123000--Sobic005G091600 Sobic007G177000 Sobic007G177000 Sobic001G123000--Sobic007G177000 Sobic009G198900 Sobic009G198900 Sobic002G226000--Sobic009G198900 Sobic003G324000 Sobic003G324000 Sobic002G226000--Sobic003G324000 Sobic002G226000--Sobic007G148200 Sobic002G226000--Sobic001G543800 Sobic001G194900 Sobic001G194900 Sobic002G226000--Sobic001G194900 Sobic002G226000--Sobic004G153400 Sobic010G280100 Sobic010G280100 Sobic002G226000--Sobic010G280100 Sobic006G152600 Sobic006G152600 Sobic002G226000--Sobic006G152600 Sobic009G180200 Sobic009G180200 Sobic002G226000--Sobic009G180200 Sobic001G111366--Sobic001G111500 Sobic001G111366--Sobic001G028700 Sobic001G111366--Sobic004G006300 Sobic001G111366--Sobic009G235900 Sobic001G111366--Sobic010G042900 Sobic001G111366--Sobic001G154100 Sobic004G256600 Sobic004G256600 Sobic001G111366--Sobic004G256600 Sobic001G111366--Sobic004G153400 Sobic010G001600 Sobic010G001600 Sobic001G111366--Sobic010G001600 Sobic001G377000 Sobic001G377000 Sobic007G148200--Sobic001G377000 Sobic004G275200 Sobic004G275200 Sobic007G148200--Sobic004G275200 Sobic007G148200--Sobic002G226000 Sobic007G148200--Sobic006G152600 Sobic001G293800 Sobic001G293800 Sobic007G148200--Sobic001G293800 Sobic007G120401 Sobic007G120401 Sobic007G148200--Sobic007G120401 Sobic007G148200--Sobic004G153400 Sobic007G148200--Sobic002G046800 Sobic007G148200--Sobic004G153501 Sobic009G235900--Sobic001G194900 Sobic002G188500 Sobic002G188500 Sobic009G235900--Sobic002G188500 Sobic008G160700 Sobic008G160700 Sobic009G235900--Sobic008G160700 Sobic001G359400 Sobic001G359400 Sobic009G235900--Sobic001G359400 Sobic005G007800 Sobic005G007800 Sobic009G235900--Sobic005G007800 Sobic009G235900--Sobic010G042900 Sobic003G005800 Sobic003G005800 Sobic009G235900--Sobic003G005800 Sobic003G145900 Sobic003G145900 Sobic009G235900--Sobic003G145900 Sobic001G347600 Sobic001G347600 Sobic009G235900--Sobic001G347600
Octagon: transcription factors


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