Gene annotation
Transcriptome id Sobic.007G177000.1
Synonym Sb07g024880, APX3
Functional annotation OsAPx4 - Peroxisomal Ascorbate Peroxidase encoding gene 5,8,9, expressed
UniProt C5YH30
Pfam PF00141
Panther DB PTHR31356 PTHR31356:SF9
NCBI CDD -
KEGG Orthology K00434; L-ascorbate peroxidase
Gene Ontology GO:0006979; response to oxidative stress GO:0004601peroxidase activity


Orthologs (automatic annotation)
TAIR AT4G35000 : ascorbate peroxidase 3
RAP-DB (Rice) LOC_Os08g43560.1 : OsAPx4 - Peroxisomal Ascorbate Peroxidase encoding gene 5,8,9, expressed
MaizeGDB (Corn) Zm00025a034218
Brachypodium KQJ99287 , KQJ81878 , KQJ81879
Barley HORVU7Hr1G057430.4 , HORVU7Hr1G057430.1 , HORVU7Hr1G057430.2 , HORVU7Hr1G057430.3 , HORVU7Hr1G057430.5 , HORVU7Hr1G057430.6
Wheat TraesCS7A02G272200 , TraesCS7B02G169800 , TraesCS7D02G272500 , TraesCS7D02G272500
Populus -


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cDNA sequences
Sobic.007G177000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G309400 CorA-like magnesium transporter protein, putative, expressed K16075: MRS2, magnesium transporter
2 Sobic.009G259400 pleckstrin homology domain-containing protein-related taxo, putative, expressed -
3 Sobic.003G001100 Lg106, putative, expressed -
4 Sobic.002G010300 photoperiodic flowering time gene(PubMedID : 22394582)@casein kinase II subunit alpha-2, putative, expressed K03097: casein kinase II subunit alpha
5 Sobic.006G200600 expressed protein -
6 Sobic.007G115200 hydrolase, NUDIX family, domain containing protein, expressed -
7 Sobic.008G070500 GTP binding protein, putative, expressed -
8 Sobic.003G344900 selT-like protein precursor, putative, expressed -
9 Sobic.002G347000 WD domain, G-beta repeat domain containing protein, expressed K14963: WDR5, SWD3, COMPASS component SWD3
10 Sobic.001G123000 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
11 Sobic.001G292200 dynamin family protein, putative, expressed -
12 Sobic.003G001000 - -
13 Sobic.010G205800 palmitoyltransferase TIP1, putative, expressed K18932: palmitoyltransferase
14 Sobic.003G012200 tRNA synthetases class II domain containing protein, expressed K01876: aspartyl-tRNA synthetase
15 Sobic.004G006200 ferrochelatase-2, chloroplast precursor, putative, expressed K01772: hemH, protoporphyrin/coproporphyrin ferrochelatase
16 Sobic.003G109100 decarboxylase, putative, expressed K01634: SGPL1, sphinganine-1-phosphate aldolase
17 Sobic.001G291100 tetraspanin family protein, putative, expressed -
18 Sobic.004G021100 SSE1, putative, expressed K13335: peroxin-16
19 Sobic.004G052900 biotin--protein ligase, putative, expressed K01942: biotin---protein ligase
20 Sobic.004G121100 expressed protein -


Gene co-expression network
sample Sobic007G177000 Sobic007G177000 Sobic001G309400 Sobic001G309400 Sobic007G177000--Sobic001G309400 Sobic009G259400 Sobic009G259400 Sobic007G177000--Sobic009G259400 Sobic003G001100 Sobic003G001100 Sobic007G177000--Sobic003G001100 Sobic002G010300 Sobic002G010300 Sobic007G177000--Sobic002G010300 Sobic006G200600 Sobic006G200600 Sobic007G177000--Sobic006G200600 Sobic007G115200 Sobic007G115200 Sobic007G177000--Sobic007G115200 Sobic008G070500 Sobic008G070500 Sobic007G177000--Sobic008G070500 Sobic003G344900 Sobic003G344900 Sobic007G177000--Sobic003G344900 Sobic002G347000 Sobic002G347000 Sobic007G177000--Sobic002G347000 Sobic001G309400--Sobic007G177000 Sobic010G079900 Sobic010G079900 Sobic001G309400--Sobic010G079900 Sobic001G309400--Sobic007G115200 Sobic001G309400--Sobic002G347000 Sobic001G309400--Sobic008G070500 Sobic004G142900 Sobic004G142900 Sobic001G309400--Sobic004G142900 Sobic010G205800 Sobic010G205800 Sobic001G309400--Sobic010G205800 Sobic001G207000 Sobic001G207000 Sobic001G309400--Sobic001G207000 Sobic006G199200 Sobic006G199200 Sobic001G309400--Sobic006G199200 Sobic004G121100 Sobic004G121100 Sobic009G259400--Sobic004G121100 Sobic002G395801 Sobic002G395801 Sobic009G259400--Sobic002G395801 Sobic003G012200 Sobic003G012200 Sobic009G259400--Sobic003G012200 Sobic009G217100 Sobic009G217100 Sobic009G259400--Sobic009G217100 Sobic003G063000 Sobic003G063000 Sobic009G259400--Sobic003G063000 Sobic010G251000 Sobic010G251000 Sobic009G259400--Sobic010G251000 Sobic009G259400--Sobic006G200600 Sobic001G281600 Sobic001G281600 Sobic009G259400--Sobic001G281600 Sobic008G179700 Sobic008G179700 Sobic009G259400--Sobic008G179700 Sobic003G001000 Sobic003G001000 Sobic003G001100--Sobic003G001000 Sobic001G292200 Sobic001G292200 Sobic003G001100--Sobic001G292200 Sobic001G000200 Sobic001G000200 Sobic003G001100--Sobic001G000200 Sobic003G001100--Sobic007G177000 Sobic007G024700 Sobic007G024700 Sobic003G001100--Sobic007G024700 Sobic001G253700 Sobic001G253700 Sobic003G001100--Sobic001G253700 Sobic003G001100--Sobic009G259400 Sobic002G340100 Sobic002G340100 Sobic003G001100--Sobic002G340100 Sobic001G071400 Sobic001G071400 Sobic003G001100--Sobic001G071400 Sobic007G026300 Sobic007G026300 Sobic002G010300--Sobic007G026300 Sobic001G090400 Sobic001G090400 Sobic002G010300--Sobic001G090400 Sobic004G350100 Sobic004G350100 Sobic002G010300--Sobic004G350100 Sobic009G198100 Sobic009G198100 Sobic002G010300--Sobic009G198100 Sobic004G021100 Sobic004G021100 Sobic002G010300--Sobic004G021100 Sobic003G081000 Sobic003G081000 Sobic002G010300--Sobic003G081000 Sobic006G173100 Sobic006G173100 Sobic002G010300--Sobic006G173100 Sobic001G356600 Sobic001G356600 Sobic002G010300--Sobic001G356600 Sobic002G200100 Sobic002G200100 Sobic002G010300--Sobic002G200100 Sobic004G353200 Sobic004G353200 Sobic006G200600--Sobic004G353200 Sobic006G200600--Sobic001G281600 Sobic006G200600--Sobic004G121100 Sobic001G392300 Sobic001G392300 Sobic006G200600--Sobic001G392300 Sobic006G200600--Sobic010G251000 Sobic008G047800 Sobic008G047800 Sobic006G200600--Sobic008G047800 Sobic009G205200 Sobic009G205200 Sobic006G200600--Sobic009G205200 Sobic007G078600 Sobic007G078600 Sobic006G200600--Sobic007G078600 Sobic003G248200 Sobic003G248200 Sobic006G200600--Sobic003G248200 Sobic001G107500 Sobic001G107500 Sobic007G115200--Sobic001G107500 Sobic001G016000 Sobic001G016000 Sobic007G115200--Sobic001G016000 Sobic007G115200--Sobic001G309400 Sobic007G104800 Sobic007G104800 Sobic007G115200--Sobic007G104800 Sobic007G115200--Sobic002G347000 Sobic002G363600 Sobic002G363600 Sobic007G115200--Sobic002G363600 Sobic002G351900 Sobic002G351900 Sobic007G115200--Sobic002G351900 Sobic007G115200--Sobic001G281600 Sobic002G092300 Sobic002G092300 Sobic007G115200--Sobic002G092300 Sobic008G070500--Sobic001G309400 Sobic004G052900 Sobic004G052900 Sobic008G070500--Sobic004G052900 Sobic008G070500--Sobic002G340100 Sobic001G114000 Sobic001G114000 Sobic008G070500--Sobic001G114000 Sobic008G070500--Sobic010G205800 Sobic004G274200 Sobic004G274200 Sobic008G070500--Sobic004G274200 Sobic003G443100 Sobic003G443100 Sobic008G070500--Sobic003G443100 Sobic001G166600 Sobic001G166600 Sobic008G070500--Sobic001G166600 Sobic009G094300 Sobic009G094300 Sobic008G070500--Sobic009G094300 Sobic003G344900--Sobic003G012200 Sobic010G000900 Sobic010G000900 Sobic003G344900--Sobic010G000900 Sobic004G348300 Sobic004G348300 Sobic003G344900--Sobic004G348300 Sobic003G344900--Sobic009G259400 Sobic005G044800 Sobic005G044800 Sobic003G344900--Sobic005G044800 Sobic001G123000 Sobic001G123000 Sobic003G344900--Sobic001G123000 Sobic001G047400 Sobic001G047400 Sobic003G344900--Sobic001G047400 Sobic001G181700 Sobic001G181700 Sobic003G344900--Sobic001G181700 Sobic001G051200 Sobic001G051200 Sobic003G344900--Sobic001G051200 Sobic003G143200 Sobic003G143200 Sobic002G347000--Sobic003G143200 Sobic005G160400 Sobic005G160400 Sobic002G347000--Sobic005G160400 Sobic002G347000--Sobic001G309400 Sobic006G180000 Sobic006G180000 Sobic002G347000--Sobic006G180000 Sobic002G347000--Sobic007G115200 Sobic002G347000--Sobic006G199200 Sobic007G167900 Sobic007G167900 Sobic002G347000--Sobic007G167900 Sobic002G347000--Sobic001G281600 Sobic008G076800 Sobic008G076800 Sobic002G347000--Sobic008G076800
Octagon: transcription factors


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