Gene annotation
Transcriptome id Sobic.008G070500.1
Synonym Sb08g006190
Functional annotation GTP binding protein, putative, expressed
UniProt C5YTI0
Pfam PF04548 PF11886
Panther DB PTHR10903 PTHR10903:SF68
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005525; GTP binding


Orthologs (automatic annotation)
TAIR AT5G20300 : Avirulence induced gene (AIG1) family protein
RAP-DB (Rice) LOC_Os12g09570.2 : GTP binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a040605
Brachypodium KQJ91912
Barley HORVU5Hr1G031380.4 , HORVU5Hr1G031380.1 , HORVU5Hr1G031380.2 , HORVU5Hr1G031380.3
Wheat TraesCS5D02G120200 , TraesCS5B02G109100 , TraesCS5A02G112900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G309400 CorA-like magnesium transporter protein, putative, expressed K16075: MRS2, magnesium transporter
2 Sobic.004G052900 biotin--protein ligase, putative, expressed K01942: biotin---protein ligase
3 Sobic.002G340100 GTPase-activating protein, putative, expressed K12486: stromal membrane-associated protein
4 Sobic.001G114000 expressed protein -
5 Sobic.010G205800 palmitoyltransferase TIP1, putative, expressed K18932: palmitoyltransferase
6 Sobic.004G274200 ara54-like RING finger protein, putative, expressed K11971: RNF14, E3 ubiquitin-protein ligase RNF14
7 Sobic.003G443100 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed -
8 Sobic.001G166600 semialdehyde dehydrogenase, NAD binding domain containing protein, putative, expressed K00145: N-acetyl-gamma-glutamyl-phosphate reductase
9 Sobic.009G094300 emp24/gp25L/p24 family protein, putative, expressed -
10 Sobic.003G100800 acetyl-CoA acetyltransferase, cytosolic, putative, expressed K00626: ACAT, acetyl-CoA C-acetyltransferase
11 Sobic.008G104200 nitrilase, putative, expressed -
12 Sobic.002G143500 sulfate transporter 4.1, chloroplast precursor, putative, expressed K18059: sulfate transporter 4
13 Sobic.001G207000 KH domain containing protein, putative, expressed K13162: poly(rC)-binding protein 2
14 Sobic.003G109100 decarboxylase, putative, expressed K01634: SGPL1, sphinganine-1-phosphate aldolase
15 Sobic.001G248300 OsPOP21 - Putative Prolyl Oligopeptidase homologue, expressed K01303: acylaminoacyl-peptidase
16 Sobic.006G245400 -(PubMedID : 34525227)@NADPH reductase, putative, expressed K00327: NADPH-ferrihemoprotein reductase
17 Sobic.007G177000 OsAPx4 - Peroxisomal Ascorbate Peroxidase encoding gene 5,8,9, expressed K00434: L-ascorbate peroxidase
18 Sobic.009G126400 glycine-rich protein, putative, expressed K14845: RAI1, RAT1-interacting protein
19 Sobic.007G024700 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
20 Sobic.002G370900 OsPOP16 - Putative Prolyl Oligopeptidase homologue, expressed K06889: uncharacterized protein


Gene co-expression network
sample Sobic008G070500 Sobic008G070500 Sobic001G309400 Sobic001G309400 Sobic008G070500--Sobic001G309400 Sobic004G052900 Sobic004G052900 Sobic008G070500--Sobic004G052900 Sobic002G340100 Sobic002G340100 Sobic008G070500--Sobic002G340100 Sobic001G114000 Sobic001G114000 Sobic008G070500--Sobic001G114000 Sobic010G205800 Sobic010G205800 Sobic008G070500--Sobic010G205800 Sobic004G274200 Sobic004G274200 Sobic008G070500--Sobic004G274200 Sobic003G443100 Sobic003G443100 Sobic008G070500--Sobic003G443100 Sobic001G166600 Sobic001G166600 Sobic008G070500--Sobic001G166600 Sobic009G094300 Sobic009G094300 Sobic008G070500--Sobic009G094300 Sobic007G177000 Sobic007G177000 Sobic001G309400--Sobic007G177000 Sobic010G079900 Sobic010G079900 Sobic001G309400--Sobic010G079900 Sobic007G115200 Sobic007G115200 Sobic001G309400--Sobic007G115200 Sobic002G347000 Sobic002G347000 Sobic001G309400--Sobic002G347000 Sobic001G309400--Sobic008G070500 Sobic004G142900 Sobic004G142900 Sobic001G309400--Sobic004G142900 Sobic001G309400--Sobic010G205800 Sobic001G207000 Sobic001G207000 Sobic001G309400--Sobic001G207000 Sobic006G199200 Sobic006G199200 Sobic001G309400--Sobic006G199200 Sobic003G109100 Sobic003G109100 Sobic004G052900--Sobic003G109100 Sobic007G024700 Sobic007G024700 Sobic004G052900--Sobic007G024700 Sobic003G100800 Sobic003G100800 Sobic004G052900--Sobic003G100800 Sobic007G172400 Sobic007G172400 Sobic004G052900--Sobic007G172400 Sobic004G052900--Sobic002G340100 Sobic002G419800 Sobic002G419800 Sobic004G052900--Sobic002G419800 Sobic006G245400 Sobic006G245400 Sobic004G052900--Sobic006G245400 Sobic001G248300 Sobic001G248300 Sobic004G052900--Sobic001G248300 Sobic004G052900--Sobic009G094300 Sobic001G292200 Sobic001G292200 Sobic002G340100--Sobic001G292200 Sobic001G071400 Sobic001G071400 Sobic002G340100--Sobic001G071400 Sobic002G340100--Sobic006G245400 Sobic002G315200 Sobic002G315200 Sobic002G340100--Sobic002G315200 Sobic009G135800 Sobic009G135800 Sobic002G340100--Sobic009G135800 Sobic002G340100--Sobic001G114000 Sobic007G217000 Sobic007G217000 Sobic002G340100--Sobic007G217000 Sobic002G340100--Sobic004G052900 Sobic001G474600 Sobic001G474600 Sobic002G340100--Sobic001G474600 Sobic001G114000--Sobic007G217000 Sobic002G112700 Sobic002G112700 Sobic001G114000--Sobic002G112700 Sobic001G065000 Sobic001G065000 Sobic001G114000--Sobic001G065000 Sobic004G067700 Sobic004G067700 Sobic001G114000--Sobic004G067700 Sobic009G166300 Sobic009G166300 Sobic001G114000--Sobic009G166300 Sobic008G047800 Sobic008G047800 Sobic001G114000--Sobic008G047800 Sobic004G072100 Sobic004G072100 Sobic001G114000--Sobic004G072100 Sobic005G118600 Sobic005G118600 Sobic001G114000--Sobic005G118600 Sobic009G126400 Sobic009G126400 Sobic001G114000--Sobic009G126400 Sobic001G121200 Sobic001G121200 Sobic010G205800--Sobic001G121200 Sobic001G390800 Sobic001G390800 Sobic010G205800--Sobic001G390800 Sobic001G124200 Sobic001G124200 Sobic010G205800--Sobic001G124200 Sobic001G007000 Sobic001G007000 Sobic010G205800--Sobic001G007000 Sobic001G000200 Sobic001G000200 Sobic010G205800--Sobic001G000200 Sobic002G262900 Sobic002G262900 Sobic010G205800--Sobic002G262900 Sobic010G205800--Sobic004G274200 Sobic010G205800--Sobic006G199200 Sobic001G079200 Sobic001G079200 Sobic010G205800--Sobic001G079200 Sobic004G274200--Sobic008G047800 Sobic010G236400 Sobic010G236400 Sobic004G274200--Sobic010G236400 Sobic004G146500 Sobic004G146500 Sobic004G274200--Sobic004G146500 Sobic004G021100 Sobic004G021100 Sobic004G274200--Sobic004G021100 Sobic008G112800 Sobic008G112800 Sobic004G274200--Sobic008G112800 Sobic003G352200 Sobic003G352200 Sobic004G274200--Sobic003G352200 Sobic009G044800 Sobic009G044800 Sobic004G274200--Sobic009G044800 Sobic002G071500 Sobic002G071500 Sobic004G274200--Sobic002G071500 Sobic004G274200--Sobic001G114000 Sobic002G310200 Sobic002G310200 Sobic003G443100--Sobic002G310200 Sobic003G184699 Sobic003G184699 Sobic003G443100--Sobic003G184699 Sobic003G443100--Sobic008G047800 Sobic001G441400 Sobic001G441400 Sobic003G443100--Sobic001G441400 Sobic009G245800 Sobic009G245800 Sobic003G443100--Sobic009G245800 Sobic005G027400 Sobic005G027400 Sobic003G443100--Sobic005G027400 Sobic003G141500 Sobic003G141500 Sobic003G443100--Sobic003G141500 Sobic001G363500 Sobic001G363500 Sobic003G443100--Sobic001G363500 Sobic010G053800 Sobic010G053800 Sobic003G443100--Sobic010G053800 Sobic007G207200 Sobic007G207200 Sobic001G166600--Sobic007G207200 Sobic002G143500 Sobic002G143500 Sobic001G166600--Sobic002G143500 Sobic006G058100 Sobic006G058100 Sobic001G166600--Sobic006G058100 Sobic009G084900 Sobic009G084900 Sobic001G166600--Sobic009G084900 Sobic004G236400 Sobic004G236400 Sobic001G166600--Sobic004G236400 Sobic001G166600--Sobic009G245800 Sobic001G219600 Sobic001G219600 Sobic001G166600--Sobic001G219600 Sobic001G166600--Sobic003G141500 Sobic002G359400 Sobic002G359400 Sobic001G166600--Sobic002G359400 Sobic009G094300--Sobic007G024700 Sobic004G113400 Sobic004G113400 Sobic009G094300--Sobic004G113400 Sobic002G270500 Sobic002G270500 Sobic009G094300--Sobic002G270500 Sobic004G329400 Sobic004G329400 Sobic009G094300--Sobic004G329400 Sobic005G157000 Sobic005G157000 Sobic009G094300--Sobic005G157000 Sobic009G094300--Sobic004G052900 Sobic001G270400 Sobic001G270400 Sobic009G094300--Sobic001G270400 Sobic009G094300--Sobic001G248300 Sobic001G207400 Sobic001G207400 Sobic009G094300--Sobic001G207400
Octagon: transcription factors


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