Gene annotation
Transcriptome id Sobic.003G001100.1
Synonym Sb03g000280
Functional annotation Lg106, putative, expressed
UniProt C5XJH1
Pfam PF04667
Panther DB PTHR10358 PTHR10358:SF10
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G64130 : cAMP-regulated phosphoprotein 19-related protein
RAP-DB (Rice) LOC_Os01g14690.4 : Lg106, putative, expressed
MaizeGDB (Corn) Zm00025a022766
Brachypodium -
Barley -
Wheat TraesCS3B02G197500
Populus -


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cDNA sequences
Sobic.003G001100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G001000 - -
2 Sobic.001G292200 dynamin family protein, putative, expressed -
3 Sobic.001G000200 TBC domain containing protein, expressed -
4 Sobic.007G177000 OsAPx4 - Peroxisomal Ascorbate Peroxidase encoding gene 5,8,9, expressed K00434: L-ascorbate peroxidase
5 Sobic.007G024700 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
6 Sobic.001G253700 protein kinase domain containing protein, expressed K04733: interleukin-1 receptor-associated kinase 4
7 Sobic.009G259400 pleckstrin homology domain-containing protein-related taxo, putative, expressed -
8 Sobic.002G340100 GTPase-activating protein, putative, expressed K12486: stromal membrane-associated protein
9 Sobic.001G071400 WD domain, G-beta repeat domain containing protein, expressed K11293: HIRA, protein HIRA/HIR1
10 Sobic.004G006200 ferrochelatase-2, chloroplast precursor, putative, expressed K01772: hemH, protoporphyrin/coproporphyrin ferrochelatase
11 Sobic.004G021100 SSE1, putative, expressed K13335: peroxin-16
12 Sobic.006G237400 cyclic nucleotide-gated ion channel, putative, expressed K05391: cyclic nucleotide gated channel, plant
13 Sobic.001G309400 CorA-like magnesium transporter protein, putative, expressed K16075: MRS2, magnesium transporter
14 Sobic.006G249700 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
15 Sobic.009G249200 transmembrane protein, putative, expressed -
16 Sobic.002G427050 - -
17 Sobic.004G274200 ara54-like RING finger protein, putative, expressed K11971: RNF14, E3 ubiquitin-protein ligase RNF14
18 Sobic.001G390800 transcription factor HBP-1b, putative, expressed K14431: transcription factor TGA
19 Sobic.004G121100 expressed protein -
20 Sobic.002G315200 DNA-binding bromodomain-containing protein, putative, expressed -


Gene co-expression network
sample Sobic003G001100 Sobic003G001100 Sobic003G001000 Sobic003G001000 Sobic003G001100--Sobic003G001000 Sobic001G292200 Sobic001G292200 Sobic003G001100--Sobic001G292200 Sobic001G000200 Sobic001G000200 Sobic003G001100--Sobic001G000200 Sobic007G177000 Sobic007G177000 Sobic003G001100--Sobic007G177000 Sobic007G024700 Sobic007G024700 Sobic003G001100--Sobic007G024700 Sobic001G253700 Sobic001G253700 Sobic003G001100--Sobic001G253700 Sobic009G259400 Sobic009G259400 Sobic003G001100--Sobic009G259400 Sobic002G340100 Sobic002G340100 Sobic003G001100--Sobic002G340100 Sobic001G071400 Sobic001G071400 Sobic003G001100--Sobic001G071400 Sobic003G001000--Sobic003G001100 Sobic003G001000--Sobic001G292200 Sobic003G001000--Sobic001G253700 Sobic007G190333 Sobic007G190333 Sobic003G001000--Sobic007G190333 Sobic010G056200 Sobic010G056200 Sobic003G001000--Sobic010G056200 Sobic002G053000 Sobic002G053000 Sobic003G001000--Sobic002G053000 Sobic003G176600 Sobic003G176600 Sobic003G001000--Sobic003G176600 Sobic006G273200 Sobic006G273200 Sobic003G001000--Sobic006G273200 Sobic006G237400 Sobic006G237400 Sobic003G001000--Sobic006G237400 Sobic001G292200--Sobic002G340100 Sobic002G134200 Sobic002G134200 Sobic001G292200--Sobic002G134200 Sobic003G280800 Sobic003G280800 Sobic001G292200--Sobic003G280800 Sobic001G292200--Sobic002G053000 Sobic005G032800 Sobic005G032800 Sobic001G292200--Sobic005G032800 Sobic008G024600 Sobic008G024600 Sobic001G292200--Sobic008G024600 Sobic001G292200--Sobic003G001100 Sobic001G178700 Sobic001G178700 Sobic001G292200--Sobic001G178700 Sobic001G292200--Sobic001G071400 Sobic009G199200 Sobic009G199200 Sobic001G000200--Sobic009G199200 Sobic010G205800 Sobic010G205800 Sobic001G000200--Sobic010G205800 Sobic001G000200--Sobic006G237400 Sobic001G000200--Sobic001G253700 Sobic008G004600 Sobic008G004600 Sobic001G000200--Sobic008G004600 Sobic003G233600 Sobic003G233600 Sobic001G000200--Sobic003G233600 Sobic001G291000 Sobic001G291000 Sobic001G000200--Sobic001G291000 Sobic001G079200 Sobic001G079200 Sobic001G000200--Sobic001G079200 Sobic001G000200--Sobic001G071400 Sobic001G309400 Sobic001G309400 Sobic007G177000--Sobic001G309400 Sobic007G177000--Sobic009G259400 Sobic007G177000--Sobic003G001100 Sobic002G010300 Sobic002G010300 Sobic007G177000--Sobic002G010300 Sobic006G200600 Sobic006G200600 Sobic007G177000--Sobic006G200600 Sobic007G115200 Sobic007G115200 Sobic007G177000--Sobic007G115200 Sobic008G070500 Sobic008G070500 Sobic007G177000--Sobic008G070500 Sobic003G344900 Sobic003G344900 Sobic007G177000--Sobic003G344900 Sobic002G347000 Sobic002G347000 Sobic007G177000--Sobic002G347000 Sobic002G270500 Sobic002G270500 Sobic007G024700--Sobic002G270500 Sobic009G094300 Sobic009G094300 Sobic007G024700--Sobic009G094300 Sobic009G249200 Sobic009G249200 Sobic007G024700--Sobic009G249200 Sobic004G052900 Sobic004G052900 Sobic007G024700--Sobic004G052900 Sobic001G270400 Sobic001G270400 Sobic007G024700--Sobic001G270400 Sobic004G264400 Sobic004G264400 Sobic007G024700--Sobic004G264400 Sobic003G305200 Sobic003G305200 Sobic007G024700--Sobic003G305200 Sobic002G132000 Sobic002G132000 Sobic007G024700--Sobic002G132000 Sobic002G419800 Sobic002G419800 Sobic007G024700--Sobic002G419800 Sobic001G253700--Sobic006G237400 Sobic001G253700--Sobic001G000200 Sobic001G253700--Sobic006G273200 Sobic001G253700--Sobic003G176600 Sobic001G253700--Sobic003G001000 Sobic004G119100 Sobic004G119100 Sobic001G253700--Sobic004G119100 Sobic001G253700--Sobic009G249200 Sobic002G187801 Sobic002G187801 Sobic001G253700--Sobic002G187801 Sobic001G253700--Sobic007G190333 Sobic004G121100 Sobic004G121100 Sobic009G259400--Sobic004G121100 Sobic002G395801 Sobic002G395801 Sobic009G259400--Sobic002G395801 Sobic003G012200 Sobic003G012200 Sobic009G259400--Sobic003G012200 Sobic009G217100 Sobic009G217100 Sobic009G259400--Sobic009G217100 Sobic003G063000 Sobic003G063000 Sobic009G259400--Sobic003G063000 Sobic010G251000 Sobic010G251000 Sobic009G259400--Sobic010G251000 Sobic009G259400--Sobic006G200600 Sobic001G281600 Sobic001G281600 Sobic009G259400--Sobic001G281600 Sobic008G179700 Sobic008G179700 Sobic009G259400--Sobic008G179700 Sobic002G340100--Sobic001G292200 Sobic002G340100--Sobic001G071400 Sobic006G245400 Sobic006G245400 Sobic002G340100--Sobic006G245400 Sobic002G315200 Sobic002G315200 Sobic002G340100--Sobic002G315200 Sobic009G135800 Sobic009G135800 Sobic002G340100--Sobic009G135800 Sobic001G114000 Sobic001G114000 Sobic002G340100--Sobic001G114000 Sobic007G217000 Sobic007G217000 Sobic002G340100--Sobic007G217000 Sobic002G340100--Sobic004G052900 Sobic001G474600 Sobic001G474600 Sobic002G340100--Sobic001G474600 Sobic001G071400--Sobic002G134200 Sobic002G309600 Sobic002G309600 Sobic001G071400--Sobic002G309600 Sobic001G071400--Sobic003G280800 Sobic008G047800 Sobic008G047800 Sobic001G071400--Sobic008G047800 Sobic009G191000 Sobic009G191000 Sobic001G071400--Sobic009G191000 Sobic001G219600 Sobic001G219600 Sobic001G071400--Sobic001G219600 Sobic005G112300 Sobic005G112300 Sobic001G071400--Sobic005G112300 Sobic001G071400--Sobic002G315200 Sobic002G008900 Sobic002G008900 Sobic001G071400--Sobic002G008900
Octagon: transcription factors


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