Gene annotation
Transcriptome id Sobic.007G190333.1
Synonym -
Functional annotation -
UniProt A0A1Z5RBQ7
Pfam PF02365
Panther DB PTHR31719 PTHR31719:SF28
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT2G33480 : NAC domain containing protein 41
RAP-DB (Rice) LOC_Os08g42400.1 : no apical meristem protein, putative, expressed
MaizeGDB (Corn) Zm00025a031741 , Zm00025a005302 , Zm00025a030447 , Zm00025a020814
Brachypodium KQJ99156 , KQK00031 , KQK00032 , PNT68893 , KQJ82981 , KQJ82980 , KQJ86754 , KQK00033
Barley HORVU2Hr1G080460.14 , HORVU2Hr1G080460.15 , HORVU2Hr1G080460.17 , HORVU2Hr1G080460.10 , HORVU2Hr1G080460.11 , HORVU2Hr1G080460.12 , HORVU2Hr1G080460.13 , HORVU2Hr1G080460.18 , HORVU2Hr1G080460.19 , HORVU7Hr1G055080.2 , HORVU7Hr1G055080.1 , HORVU2Hr1G080460.8 , HORVU2Hr1G080460.9 , HORVU2Hr1G080460.6 , HORVU2Hr1G080460.7 , HORVU2Hr1G080460.4 , HORVU2Hr1G080460.5 , HORVU2Hr1G080460.2 , HORVU2Hr1G080460.3 , HORVU2Hr1G080460.1 , HORVU2Hr1G080460.21 , HORVU2Hr1G080460.20
Wheat TraesCS2B02G343600 , TraesCS7B02G160900 , TraesCS5A02G291200 , TraesCS5D02G298600 , TraesCS7A02G263100 , TraesCS7D02G263800 , TraesCS2D02G324700 , TraesCS5B02G290200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G001000 - -
2 Sobic.001G253700 protein kinase domain containing protein, expressed K04733: interleukin-1 receptor-associated kinase 4
3 Sobic.003G113200 5-nucleotidase domain-containing protein, putative, expressed -
4 Sobic.010G056200 WD-40 repeat family protein, putative, expressed -
5 Sobic.003G176600 expressed protein -
6 Sobic.001G048766 - -
7 Sobic.001G292200 dynamin family protein, putative, expressed -
8 Sobic.001G159400 protein kinase domain containing protein, expressed -
9 Sobic.004G153400 OsFBK7 - F-box domain and kelch repeat containing protein, expressed -
10 Sobic.003G001100 Lg106, putative, expressed -
11 Sobic.004G121100 expressed protein -
12 Sobic.004G153501 - -
13 Sobic.009G157200 OsFBL23 - F-box domain and LRR containing protein, expressed K13463: coronatine-insensitive protein 1
14 Sobic.002G340100 GTPase-activating protein, putative, expressed K12486: stromal membrane-associated protein
15 Sobic.006G237400 cyclic nucleotide-gated ion channel, putative, expressed K05391: cyclic nucleotide gated channel, plant
16 Sobic.006G209500 transcription initiation factor IIE subunit beta, putative, expressed K03137: TFIIE2, GTF2E2, transcription initiation factor TFIIE subunit beta
17 Sobic.001G543800 ethylene-responsive element-binding protein, putative, expressed -
18 Sobic.002G226000 leucine-rich repeat family protein, putative, expressed -
19 Sobic.005G032800 splicing factor, putative, expressed K13109: IK, RED, IK cytokine
20 Sobic.009G235900 transporter family protein, putative, expressed K08145: SLC2A8, MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 8


Gene co-expression network
sample Sobic007G190333 Sobic007G190333 Sobic003G001000 Sobic003G001000 Sobic007G190333--Sobic003G001000 Sobic001G253700 Sobic001G253700 Sobic007G190333--Sobic001G253700 Sobic003G113200 Sobic003G113200 Sobic007G190333--Sobic003G113200 Sobic010G056200 Sobic010G056200 Sobic007G190333--Sobic010G056200 Sobic003G176600 Sobic003G176600 Sobic007G190333--Sobic003G176600 Sobic001G048766 Sobic001G048766 Sobic007G190333--Sobic001G048766 Sobic001G292200 Sobic001G292200 Sobic007G190333--Sobic001G292200 Sobic001G159400 Sobic001G159400 Sobic007G190333--Sobic001G159400 Sobic004G153400 Sobic004G153400 Sobic007G190333--Sobic004G153400 Sobic003G001100 Sobic003G001100 Sobic003G001000--Sobic003G001100 Sobic003G001000--Sobic001G292200 Sobic003G001000--Sobic001G253700 Sobic003G001000--Sobic007G190333 Sobic003G001000--Sobic010G056200 Sobic002G053000 Sobic002G053000 Sobic003G001000--Sobic002G053000 Sobic003G001000--Sobic003G176600 Sobic006G273200 Sobic006G273200 Sobic003G001000--Sobic006G273200 Sobic006G237400 Sobic006G237400 Sobic003G001000--Sobic006G237400 Sobic001G253700--Sobic006G237400 Sobic001G000200 Sobic001G000200 Sobic001G253700--Sobic001G000200 Sobic001G253700--Sobic006G273200 Sobic001G253700--Sobic003G176600 Sobic001G253700--Sobic003G001000 Sobic004G119100 Sobic004G119100 Sobic001G253700--Sobic004G119100 Sobic009G249200 Sobic009G249200 Sobic001G253700--Sobic009G249200 Sobic002G187801 Sobic002G187801 Sobic001G253700--Sobic002G187801 Sobic001G253700--Sobic007G190333 Sobic006G128900 Sobic006G128900 Sobic003G113200--Sobic006G128900 Sobic001G111900 Sobic001G111900 Sobic003G113200--Sobic001G111900 Sobic006G021250 Sobic006G021250 Sobic003G113200--Sobic006G021250 Sobic003G280800 Sobic003G280800 Sobic003G113200--Sobic003G280800 Sobic005G039500 Sobic005G039500 Sobic003G113200--Sobic005G039500 Sobic007G178700 Sobic007G178700 Sobic003G113200--Sobic007G178700 Sobic006G209850 Sobic006G209850 Sobic003G113200--Sobic006G209850 Sobic008G024600 Sobic008G024600 Sobic003G113200--Sobic008G024600 Sobic005G032800 Sobic005G032800 Sobic003G113200--Sobic005G032800 Sobic001G107500 Sobic001G107500 Sobic010G056200--Sobic001G107500 Sobic004G113800 Sobic004G113800 Sobic010G056200--Sobic004G113800 Sobic004G083700 Sobic004G083700 Sobic010G056200--Sobic004G083700 Sobic007G052900 Sobic007G052900 Sobic010G056200--Sobic007G052900 Sobic003G324000 Sobic003G324000 Sobic010G056200--Sobic003G324000 Sobic009G065100 Sobic009G065100 Sobic010G056200--Sobic009G065100 Sobic006G228500 Sobic006G228500 Sobic010G056200--Sobic006G228500 Sobic002G309800 Sobic002G309800 Sobic010G056200--Sobic002G309800 Sobic009G157200 Sobic009G157200 Sobic010G056200--Sobic009G157200 Sobic003G176600--Sobic006G273200 Sobic003G176600--Sobic001G111900 Sobic001G298600 Sobic001G298600 Sobic003G176600--Sobic001G298600 Sobic003G176600--Sobic001G253700 Sobic007G132400 Sobic007G132400 Sobic003G176600--Sobic007G132400 Sobic008G062000 Sobic008G062000 Sobic003G176600--Sobic008G062000 Sobic008G067600 Sobic008G067600 Sobic003G176600--Sobic008G067600 Sobic001G281600 Sobic001G281600 Sobic003G176600--Sobic001G281600 Sobic002G310200 Sobic002G310200 Sobic003G176600--Sobic002G310200 Sobic001G048766--Sobic001G292200 Sobic001G048766--Sobic007G190333 Sobic002G340100 Sobic002G340100 Sobic001G048766--Sobic002G340100 Sobic009G211000 Sobic009G211000 Sobic001G048766--Sobic009G211000 Sobic003G100800 Sobic003G100800 Sobic001G048766--Sobic003G100800 Sobic001G248300 Sobic001G248300 Sobic001G048766--Sobic001G248300 Sobic001G048766--Sobic001G159400 Sobic004G153501 Sobic004G153501 Sobic001G048766--Sobic004G153501 Sobic001G382000 Sobic001G382000 Sobic001G048766--Sobic001G382000 Sobic001G292200--Sobic002G340100 Sobic002G134200 Sobic002G134200 Sobic001G292200--Sobic002G134200 Sobic001G292200--Sobic003G280800 Sobic001G292200--Sobic002G053000 Sobic001G292200--Sobic005G032800 Sobic001G292200--Sobic008G024600 Sobic001G292200--Sobic003G001100 Sobic001G178700 Sobic001G178700 Sobic001G292200--Sobic001G178700 Sobic001G071400 Sobic001G071400 Sobic001G292200--Sobic001G071400 Sobic003G381200 Sobic003G381200 Sobic001G159400--Sobic003G381200 Sobic003G138500 Sobic003G138500 Sobic001G159400--Sobic003G138500 Sobic001G090500 Sobic001G090500 Sobic001G159400--Sobic001G090500 Sobic010G256700 Sobic010G256700 Sobic001G159400--Sobic010G256700 Sobic007G193700 Sobic007G193700 Sobic001G159400--Sobic007G193700 Sobic002G276100 Sobic002G276100 Sobic001G159400--Sobic002G276100 Sobic003G396200 Sobic003G396200 Sobic001G159400--Sobic003G396200 Sobic004G181700 Sobic004G181700 Sobic001G159400--Sobic004G181700 Sobic004G317100 Sobic004G317100 Sobic001G159400--Sobic004G317100 Sobic004G153400--Sobic004G153501 Sobic002G046800 Sobic002G046800 Sobic004G153400--Sobic002G046800 Sobic003G093300 Sobic003G093300 Sobic004G153400--Sobic003G093300 Sobic001G111500 Sobic001G111500 Sobic004G153400--Sobic001G111500 Sobic001G123000 Sobic001G123000 Sobic004G153400--Sobic001G123000 Sobic002G226000 Sobic002G226000 Sobic004G153400--Sobic002G226000 Sobic001G111366 Sobic001G111366 Sobic004G153400--Sobic001G111366 Sobic007G148200 Sobic007G148200 Sobic004G153400--Sobic007G148200 Sobic009G235900 Sobic009G235900 Sobic004G153400--Sobic009G235900
Octagon: transcription factors


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